KCC002661A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC002661A_C01 KCC002661A_c01
gCGGCGAGCAGCACTTATAAGGCCCAATAAGTTGCAATCGACTGACGCAGAGCGTGCAAG
CTGCCTTGTGCCAGCTTGAATCGCGAGTGCCGATGCTTCCAGCGACTCATAATTGCACGC
GGGGCTGCTCGACTCGGCCGACGCGCACTTAACCTGTACTTGGGTCCTGATGCGGAGCTA
CTACGAGCGCCTCGGCGTCTTAACGTGTGCAAGCAACGACGATATCCGGCGCGCTTACAG
GGCGCTCGCTCTTAGCGCTCATCCAGATAAGGGTGGCAGCCGGAGCGAGTGGGGAAGCAT
TCAAGAGGCATACGAAACCCTAAGTTCACCGGAGAAACGTTGCCTCTATGACTTCATGGG
GGCCTTCGCGCACCTGTCAGAGAGGAACTGGTCACAGCCCGGCCCGCAGGCCACATCCGG
GGACAGCTACAGCGCGCAGCCGGCGTCACGCTGCGGCAGTGCCAGCAGTGTGAGCAGCCT
GGACTCTTACACATCTCTTGAAAACGCTGGCATAGCCACCTCAGGGCTGCTCGGGAAGCG
GC


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC002661A_C01 KCC002661A_c01
         (542 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

gb|AAF64454.1|AF239932_1 DnaJ protein [Euphorbia esula]                70  2e-11
dbj|BAA35121.1| DnaJ homolog [Salix gilgiana]                          69  3e-11
pir||T01643 DnaJ protein homolog ZMDJ1 - maize gi|2984709|gb|AAC...    69  4e-11
gb|AAO72551.1| DNAJ-like protein [Oryza sativa (japonica cultiva...    69  4e-11
gb|AAD12055.1| DnaJ protein [Hevea brasiliensis]                       69  5e-11

>gb|AAF64454.1|AF239932_1 DnaJ protein [Euphorbia esula]
          Length = 418

 Score = 69.7 bits (169), Expect = 2e-11
 Identities = 32/61 (52%), Positives = 41/61 (66%)
 Frame = +2

Query: 179 YYERLGVLTCASNDDIRRAYRALALSAHPDKGGSRSEWGSIQEAYETLSSPEKRCLYDFM 358
           YYE LGV   AS DD+++AYR  A+  HPDKGG   ++  + +AYE LS PEKR +YD  
Sbjct: 14  YYEILGVSKSASQDDLKKAYRKAAIKNHPDKGGDPEKFKELAQAYEVLSDPEKRDIYDQY 73

Query: 359 G 361
           G
Sbjct: 74  G 74

>dbj|BAA35121.1| DnaJ homolog [Salix gilgiana]
          Length = 420

 Score = 69.3 bits (168), Expect = 3e-11
 Identities = 32/61 (52%), Positives = 41/61 (66%)
 Frame = +2

Query: 179 YYERLGVLTCASNDDIRRAYRALALSAHPDKGGSRSEWGSIQEAYETLSSPEKRCLYDFM 358
           YYE LGV   AS DD+++AYR  A+  HPDKGG   ++  + +AYE LS PEKR +YD  
Sbjct: 14  YYEVLGVSKSASQDDLKKAYRKAAIKNHPDKGGDPEKFKELAQAYEVLSDPEKREIYDQY 73

Query: 359 G 361
           G
Sbjct: 74  G 74

>pir||T01643 DnaJ protein homolog ZMDJ1 - maize gi|2984709|gb|AAC08009.1|
           DnaJ-related protein ZMDJ1 [Zea mays]
          Length = 419

 Score = 68.9 bits (167), Expect = 4e-11
 Identities = 32/61 (52%), Positives = 41/61 (66%)
 Frame = +2

Query: 179 YYERLGVLTCASNDDIRRAYRALALSAHPDKGGSRSEWGSIQEAYETLSSPEKRCLYDFM 358
           YYE LGV   AS DD+++AYR  A+  HPDKGG   ++  + +AYE LS PEKR +YD  
Sbjct: 14  YYEILGVPKSASQDDLKKAYRKAAIKNHPDKGGDPEKFKELAQAYEVLSDPEKREIYDQY 73

Query: 359 G 361
           G
Sbjct: 74  G 74

>gb|AAO72551.1| DNAJ-like protein [Oryza sativa (japonica cultivar-group)]
          Length = 417

 Score = 68.9 bits (167), Expect = 4e-11
 Identities = 32/61 (52%), Positives = 41/61 (66%)
 Frame = +2

Query: 179 YYERLGVLTCASNDDIRRAYRALALSAHPDKGGSRSEWGSIQEAYETLSSPEKRCLYDFM 358
           YYE LGV   AS DD+++AYR  A+  HPDKGG   ++  + +AYE LS PEKR +YD  
Sbjct: 14  YYEILGVPKTASQDDLKKAYRKAAIKNHPDKGGDPEKFKELAQAYEVLSDPEKREIYDQY 73

Query: 359 G 361
           G
Sbjct: 74  G 74

>gb|AAD12055.1| DnaJ protein [Hevea brasiliensis]
          Length = 415

 Score = 68.6 bits (166), Expect = 5e-11
 Identities = 32/61 (52%), Positives = 41/61 (66%)
 Frame = +2

Query: 179 YYERLGVLTCASNDDIRRAYRALALSAHPDKGGSRSEWGSIQEAYETLSSPEKRCLYDFM 358
           YYE LGV   AS DD+++AYR  A+  HPDKGG   ++  + +AYE LS PEKR +YD  
Sbjct: 14  YYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGDPEKFKELAQAYEVLSDPEKREIYDQY 73

Query: 359 G 361
           G
Sbjct: 74  G 74



EST assemble image


clone accession position
1 MXL019f04_r BP094212 1 476
2 MXL052c09_r BP096081 2 461
3 MX252h02_r BP092339 30 544
4 MX215h03_r BP089912 30 336
5 HCL080g10_r AV644046 55 542
6 LCL016d11_r AV626841 128 425




Chlamydomonas reinhardtii
Kazusa DNA Research Institute