KCC002661A_c01
[Fasta Sequence]
[Nr Search]
[EST assemble image]
Fasta Sequence
>KCC002661A_C01 KCC002661A_c01
gCGGCGAGCAGCACTTATAAGGCCCAATAAGTTGCAATCGACTGACGCAGAGCGTGCAAG
CTGCCTTGTGCCAGCTTGAATCGCGAGTGCCGATGCTTCCAGCGACTCATAATTGCACGC
GGGGCTGCTCGACTCGGCCGACGCGCACTTAACCTGTACTTGGGTCCTGATGCGGAGCTA
CTACGAGCGCCTCGGCGTCTTAACGTGTGCAAGCAACGACGATATCCGGCGCGCTTACAG
GGCGCTCGCTCTTAGCGCTCATCCAGATAAGGGTGGCAGCCGGAGCGAGTGGGGAAGCAT
TCAAGAGGCATACGAAACCCTAAGTTCACCGGAGAAACGTTGCCTCTATGACTTCATGGG
GGCCTTCGCGCACCTGTCAGAGAGGAACTGGTCACAGCCCGGCCCGCAGGCCACATCCGG
GGACAGCTACAGCGCGCAGCCGGCGTCACGCTGCGGCAGTGCCAGCAGTGTGAGCAGCCT
GGACTCTTACACATCTCTTGAAAACGCTGGCATAGCCACCTCAGGGCTGCTCGGGAAGCG
GC
Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC002661A_C01 KCC002661A_c01
(542 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAF64454.1|AF239932_1 DnaJ protein [Euphorbia esula] 70 2e-11
dbj|BAA35121.1| DnaJ homolog [Salix gilgiana] 69 3e-11
pir||T01643 DnaJ protein homolog ZMDJ1 - maize gi|2984709|gb|AAC... 69 4e-11
gb|AAO72551.1| DNAJ-like protein [Oryza sativa (japonica cultiva... 69 4e-11
gb|AAD12055.1| DnaJ protein [Hevea brasiliensis] 69 5e-11
>gb|AAF64454.1|AF239932_1 DnaJ protein [Euphorbia esula]
Length = 418
Score = 69.7 bits (169), Expect = 2e-11
Identities = 32/61 (52%), Positives = 41/61 (66%)
Frame = +2
Query: 179 YYERLGVLTCASNDDIRRAYRALALSAHPDKGGSRSEWGSIQEAYETLSSPEKRCLYDFM 358
YYE LGV AS DD+++AYR A+ HPDKGG ++ + +AYE LS PEKR +YD
Sbjct: 14 YYEILGVSKSASQDDLKKAYRKAAIKNHPDKGGDPEKFKELAQAYEVLSDPEKRDIYDQY 73
Query: 359 G 361
G
Sbjct: 74 G 74
>dbj|BAA35121.1| DnaJ homolog [Salix gilgiana]
Length = 420
Score = 69.3 bits (168), Expect = 3e-11
Identities = 32/61 (52%), Positives = 41/61 (66%)
Frame = +2
Query: 179 YYERLGVLTCASNDDIRRAYRALALSAHPDKGGSRSEWGSIQEAYETLSSPEKRCLYDFM 358
YYE LGV AS DD+++AYR A+ HPDKGG ++ + +AYE LS PEKR +YD
Sbjct: 14 YYEVLGVSKSASQDDLKKAYRKAAIKNHPDKGGDPEKFKELAQAYEVLSDPEKREIYDQY 73
Query: 359 G 361
G
Sbjct: 74 G 74
>pir||T01643 DnaJ protein homolog ZMDJ1 - maize gi|2984709|gb|AAC08009.1|
DnaJ-related protein ZMDJ1 [Zea mays]
Length = 419
Score = 68.9 bits (167), Expect = 4e-11
Identities = 32/61 (52%), Positives = 41/61 (66%)
Frame = +2
Query: 179 YYERLGVLTCASNDDIRRAYRALALSAHPDKGGSRSEWGSIQEAYETLSSPEKRCLYDFM 358
YYE LGV AS DD+++AYR A+ HPDKGG ++ + +AYE LS PEKR +YD
Sbjct: 14 YYEILGVPKSASQDDLKKAYRKAAIKNHPDKGGDPEKFKELAQAYEVLSDPEKREIYDQY 73
Query: 359 G 361
G
Sbjct: 74 G 74
>gb|AAO72551.1| DNAJ-like protein [Oryza sativa (japonica cultivar-group)]
Length = 417
Score = 68.9 bits (167), Expect = 4e-11
Identities = 32/61 (52%), Positives = 41/61 (66%)
Frame = +2
Query: 179 YYERLGVLTCASNDDIRRAYRALALSAHPDKGGSRSEWGSIQEAYETLSSPEKRCLYDFM 358
YYE LGV AS DD+++AYR A+ HPDKGG ++ + +AYE LS PEKR +YD
Sbjct: 14 YYEILGVPKTASQDDLKKAYRKAAIKNHPDKGGDPEKFKELAQAYEVLSDPEKREIYDQY 73
Query: 359 G 361
G
Sbjct: 74 G 74
>gb|AAD12055.1| DnaJ protein [Hevea brasiliensis]
Length = 415
Score = 68.6 bits (166), Expect = 5e-11
Identities = 32/61 (52%), Positives = 41/61 (66%)
Frame = +2
Query: 179 YYERLGVLTCASNDDIRRAYRALALSAHPDKGGSRSEWGSIQEAYETLSSPEKRCLYDFM 358
YYE LGV AS DD+++AYR A+ HPDKGG ++ + +AYE LS PEKR +YD
Sbjct: 14 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGDPEKFKELAQAYEVLSDPEKREIYDQY 73
Query: 359 G 361
G
Sbjct: 74 G 74
EST assemble image
|
|
|
|
clone |
accession |
position |
1 |
MXL019f04_r |
BP094212 |
1 |
476 |
2 |
MXL052c09_r |
BP096081 |
2 |
461 |
3 |
MX252h02_r |
BP092339 |
30 |
544 |
4 |
MX215h03_r |
BP089912 |
30 |
336 |
5 |
HCL080g10_r |
AV644046 |
55 |
542 |
6 |
LCL016d11_r |
AV626841 |
128 |
425 |
|
Chlamydomonas reinhardtii
Kazusa DNA Research Institute