KCC002660A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC002660A_C01 KCC002660A_c01
CGCAGACAAAACTAGGCGACAACGGCCTACTTCAAGTTCTCTCGTCAATTGGAGCCTCCA
ACAAAATGGAGCGAGCTATATCTGGCATTACCAGCAAGCTGAGCTCTCGGAAGAGCACAA
AAGACTTTTCGGCGCTCGCGGGAGGAAAGGAATGGCCCACGGATGCAAACCAGTACCAAA
TTCTGGACGATTGCGGTCGGGGTGTCAGTGCAACTGTGCATCGTGCAAAATGCCTCACGA
ATGGCGAGATAATCGCTGTGAAGCTGATGAACCTAGAGTCTATGAACTGCGACCTGGACG
AGATCATACACGAGGCGCAGACCATGCGCATGTACAACCACCCCAACATCCTGCCGCTGT
ATACCTCCTTCGTGCACGGACAAGAGCTGTGGATGGTCATGCCTTTCGTGGCGGGAGGCT
CGGTACTGCACATTATGAAATACGCGTACCCGGAGGGCCT


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC002660A_C01 KCC002660A_c01
         (460 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|NP_196976.2| protein kinase family [Arabidopsis thaliana] gi...   118  3e-26
gb|AAL38867.1| putative protein kinase [Arabidopsis thaliana]         118  3e-26
pir||T51417 protein kinase-like protein - Arabidopsis thaliana g...   118  3e-26
ref|NP_178082.1| protein kinase family [Arabidopsis thaliana] gi...   114  7e-25
ref|NP_177200.1| protein kinase family [Arabidopsis thaliana]         108  3e-23

>ref|NP_196976.2| protein kinase family [Arabidopsis thaliana]
           gi|27754255|gb|AAO22581.1| putative protein kinase
           [Arabidopsis thaliana]
          Length = 674

 Score =  118 bits (296), Expect = 3e-26
 Identities = 52/104 (50%), Positives = 76/104 (73%)
 Frame = +3

Query: 147 KEWPTDANQYQILDDCGRGVSATVHRAKCLTNGEIIAVKLMNLESMNCDLDEIIHEAQTM 326
           K++P +A  Y++ ++ G GVSATVHRA C+    ++A+K+++LE  N DLD I  E QTM
Sbjct: 7   KKFPLNAKDYKLYEEIGDGVSATVHRALCIPLNVVVAIKVLDLEKCNNDLDGIRREVQTM 66

Query: 327 RMYNHPNILPLYTSFVHGQELWMVMPFVAGGSVLHIMKYAYPEG 458
            + NHPN+L  + SF  G +LW+VMP++AGGS LHI+K +YP+G
Sbjct: 67  SLINHPNVLQAHCSFTTGHQLWVVMPYMAGGSCLHIIKSSYPDG 110

>gb|AAL38867.1| putative protein kinase [Arabidopsis thaliana]
          Length = 674

 Score =  118 bits (296), Expect = 3e-26
 Identities = 52/104 (50%), Positives = 76/104 (73%)
 Frame = +3

Query: 147 KEWPTDANQYQILDDCGRGVSATVHRAKCLTNGEIIAVKLMNLESMNCDLDEIIHEAQTM 326
           K++P +A  Y++ ++ G GVSATVHRA C+    ++A+K+++LE  N DLD I  E QTM
Sbjct: 7   KKFPLNAKDYKLYEEIGDGVSATVHRALCIPLNVVVAIKVLDLEKCNNDLDGIRREVQTM 66

Query: 327 RMYNHPNILPLYTSFVHGQELWMVMPFVAGGSVLHIMKYAYPEG 458
            + NHPN+L  + SF  G +LW+VMP++AGGS LHI+K +YP+G
Sbjct: 67  SLINHPNVLQAHCSFTTGHQLWVVMPYMAGGSCLHIIKSSYPDG 110

>pir||T51417 protein kinase-like protein - Arabidopsis thaliana
           gi|9755740|emb|CAC01871.1| protein kinase-like protein
           [Arabidopsis thaliana]
          Length = 561

 Score =  118 bits (296), Expect = 3e-26
 Identities = 52/104 (50%), Positives = 76/104 (73%)
 Frame = +3

Query: 147 KEWPTDANQYQILDDCGRGVSATVHRAKCLTNGEIIAVKLMNLESMNCDLDEIIHEAQTM 326
           K++P +A  Y++ ++ G GVSATVHRA C+    ++A+K+++LE  N DLD I  E QTM
Sbjct: 7   KKFPLNAKDYKLYEEIGDGVSATVHRALCIPLNVVVAIKVLDLEKCNNDLDGIRREVQTM 66

Query: 327 RMYNHPNILPLYTSFVHGQELWMVMPFVAGGSVLHIMKYAYPEG 458
            + NHPN+L  + SF  G +LW+VMP++AGGS LHI+K +YP+G
Sbjct: 67  SLINHPNVLQAHCSFTTGHQLWVVMPYMAGGSCLHIIKSSYPDG 110

>ref|NP_178082.1| protein kinase family [Arabidopsis thaliana]
           gi|7715606|gb|AAF68124.1|AC010793_19 F20B17.7
           [Arabidopsis thaliana]
          Length = 547

 Score =  114 bits (284), Expect = 7e-25
 Identities = 49/104 (47%), Positives = 73/104 (70%)
 Frame = +3

Query: 147 KEWPTDANQYQILDDCGRGVSATVHRAKCLTNGEIIAVKLMNLESMNCDLDEIIHEAQTM 326
           K++P     Y + +  G+GVSA VHRA C+   E++A+K+++ E  NCDL+ I  EAQTM
Sbjct: 4   KKYPIGPEHYTLYEFIGQGVSALVHRALCIPFDEVVAIKILDFERDNCDLNNISREAQTM 63

Query: 327 RMYNHPNILPLYTSFVHGQELWMVMPFVAGGSVLHIMKYAYPEG 458
            + +HPN+L  + SFV    LW++MP+++GGS LHI+K AYP+G
Sbjct: 64  MLVDHPNVLKSHCSFVSDHNLWVIMPYMSGGSCLHILKAAYPDG 107

>ref|NP_177200.1| protein kinase family [Arabidopsis thaliana]
          Length = 594

 Score =  108 bits (270), Expect = 3e-23
 Identities = 47/104 (45%), Positives = 70/104 (67%)
 Frame = +3

Query: 147 KEWPTDANQYQILDDCGRGVSATVHRAKCLTNGEIIAVKLMNLESMNCDLDEIIHEAQTM 326
           K +P  A  Y++ ++ G GVSATV+RA+C+   EI+AVK+++LE    DL+ I  E   M
Sbjct: 7   KRFPLYAKDYELFEEVGEGVSATVYRARCIALNEIVAVKILDLEKCRNDLETIRKEVHIM 66

Query: 327 RMYNHPNILPLYTSFVHGQELWMVMPFVAGGSVLHIMKYAYPEG 458
            + +HPN+L  + SF+    LW+VMP+++GGS  H+MK  YPEG
Sbjct: 67  SLIDHPNLLKAHCSFIDSSSLWIVMPYMSGGSCFHLMKSVYPEG 110



EST assemble image


clone accession position
1 HCL080d07_r AV644023 1 460
2 HCL094c05_r AV644822 1 451




Chlamydomonas reinhardtii
Kazusa DNA Research Institute