Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC002658A_C01 KCC002658A_c01
(503 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_771370.1| blr4730 [Bradyrhizobium japonicum] gi|27352994|... 39 0.048
ref|ZP_00089346.1| COG0583: Transcriptional regulator [Azotobact... 35 0.40
ref|NP_818162.1| gp89 [Mycobacteriophage Bxz1] gi|29425322|gb|AA... 35 0.53
ref|XP_345103.1| similar to transcription factor Math5 [Rattus n... 35 0.69
ref|NP_058560.1| atonal homolog 7 [Mus musculus] gi|3800787|gb|A... 35 0.69
>ref|NP_771370.1| blr4730 [Bradyrhizobium japonicum] gi|27352994|dbj|BAC49995.1|
blr4730 [Bradyrhizobium japonicum USDA 110]
Length = 580
Score = 38.5 bits (88), Expect = 0.048
Identities = 37/132 (28%), Positives = 54/132 (40%), Gaps = 7/132 (5%)
Frame = +3
Query: 123 WPKNAHINVLALGS*TYPRHPSRSKPT*AQEAN----ASTWSAMLRS-FNCGIGTTRMAN 287
WPKN +N P PS S T + ++ A+T SA + + + RM +
Sbjct: 43 WPKNTPLNA--------PVAPSSSNSTPIRPSSPIVIATTTSAPRAARWQLSLPCRRMTS 94
Query: 288 RLSKCGRSAFLMAALPKSTWMRTAVKPCTASGHGRQPAAGGPTRRGAS--ALSGPSWSRD 461
R S R F + P T+ P A G + + P R S A +GP+WS
Sbjct: 95 RCSAASRRPFTTSRTPAKASTATSA-PNAARGCSPRTSTASPKRSSFSWEASTGPTWSHR 153
Query: 462 S*RCVYSICLFG 497
S RC ++ G
Sbjct: 154 SSRCSPNVACRG 165
>ref|ZP_00089346.1| COG0583: Transcriptional regulator [Azotobacter vinelandii]
Length = 484
Score = 35.4 bits (80), Expect = 0.40
Identities = 32/117 (27%), Positives = 43/117 (36%), Gaps = 1/117 (0%)
Frame = -1
Query: 500 PSEQAYAVDAPL*VPRPRGSGER*CAPSGRPA-GSGLPPMTGCGARLDSCSHPGRFG*GG 324
PS + D P P P + A P SG P C+ PGR G
Sbjct: 9 PSTITISRDIPSTSPSPNWAISAGTASRASPTTSSGWPGRRDSACARPPCAFPGRTGRSS 68
Query: 323 HQES*SPTLAQSVCHPCRSNPAVEASEHCAPSRSVGFLRSCRFTPAGVPRICSRSQC 153
+ S SPTL + R+ V S C P+ +C +P+ R C R+ C
Sbjct: 69 VRRSRSPTLCSTGSR--RARRTVSPSVRCCPT-------ACSPSPSWWCRFCRRAAC 116
>ref|NP_818162.1| gp89 [Mycobacteriophage Bxz1] gi|29425322|gb|AAN16746.1| gp89
[Mycobacteriophage Bxz1]
Length = 874
Score = 35.0 bits (79), Expect = 0.53
Identities = 33/114 (28%), Positives = 44/114 (37%), Gaps = 4/114 (3%)
Frame = +1
Query: 166 EHIRGTPA---GVNRHERRKPTLRLGAQCSEASTAGLERQGWQTD*ASVGDQLS*WPPYP 336
+H++ T A G + E + G +E T +E Q D G + P P
Sbjct: 583 QHLQSTLALRQGKTQTELGEAQAVAGEAQAELQTKQIEMQEMMMDQQMAGGVMPGQPMLP 642
Query: 337 NLPGCEQLSSRAP-HPVMGGNPLPAGRPEGAHQRSPDPRGLGTHKGASTAYACS 495
PG AP P GG P PAG P G +P P G ++ YA S
Sbjct: 643 --PGAAGPPPGAPGDPAAGGPPPPAGGPMGGPPVAPAPGVAGPGNAPASFYAAS 694
>ref|XP_345103.1| similar to transcription factor Math5 [Rattus norvegicus]
Length = 149
Score = 34.7 bits (78), Expect = 0.69
Identities = 16/31 (51%), Positives = 18/31 (57%), Gaps = 1/31 (3%)
Frame = -1
Query: 428 CAPSGRPAGS-GLPPMTGCGARLDSCSHPGR 339
C P G PAG+ G PP G R SC+ PGR
Sbjct: 5 CKPHGPPAGARGAPPCAGAAERAVSCAGPGR 35
>ref|NP_058560.1| atonal homolog 7 [Mus musculus] gi|3800787|gb|AAC68868.1|
transcription factor Math5 [Mus musculus]
gi|15987113|gb|AAL11912.1|AF418923_1 ATOH7 [Mus
musculus]
Length = 149
Score = 34.7 bits (78), Expect = 0.69
Identities = 16/31 (51%), Positives = 18/31 (57%), Gaps = 1/31 (3%)
Frame = -1
Query: 428 CAPSGRPAGS-GLPPMTGCGARLDSCSHPGR 339
C P G PAG+ G PP G R SC+ PGR
Sbjct: 5 CKPHGPPAGARGAPPCAGAAERAVSCAGPGR 35
