Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC002657A_C01 KCC002657A_c01
(469 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAM12876.1|AF494290_1 quinol-to-oxygen oxidoreductase [Chlamy... 235 2e-61
gb|AAL32472.1| dragline silk protein spidroin 2 [Nephila clavata] 38 0.066
dbj|BAB28458.1| unnamed protein product [Mus musculus] 37 0.087
dbj|BAB13373.1| KIAA1547 protein [Homo sapiens] 35 0.33
ref|NP_793444.1| membrane protein, putative [Pseudomonas syringa... 34 0.73
>gb|AAM12876.1|AF494290_1 quinol-to-oxygen oxidoreductase [Chlamydomonas reinhardtii]
Length = 471
Score = 235 bits (600), Expect = 2e-61
Identities = 116/118 (98%), Positives = 117/118 (98%)
Frame = +2
Query: 116 MDSMAPMALGQRGPCVRTLQQRRTLRACPVSRGTVGRLVVRAVASPPKMDTEAAALKATA 295
MDSMAPMALGQRGPCVRTLQQRRTLRACPVSRGTVGRLVVRAVASPPKMDTEAAALKA A
Sbjct: 1 MDSMAPMALGQRGPCVRTLQQRRTLRACPVSRGTVGRLVVRAVASPPKMDTEAAALKAKA 60
Query: 296 SGVQQPVYFADSVASVSMDEECSAFIDRDGDFMEVMCCDYGYRSGASRMYQQENDGRI 469
SGVQQPVYFADSVASVSMDEECSAFIDRDGDFMEVMCCDYG+RSGASRMYQQENDGRI
Sbjct: 61 SGVQQPVYFADSVASVSMDEECSAFIDRDGDFMEVMCCDYGFRSGASRMYQQENDGRI 118
>gb|AAL32472.1| dragline silk protein spidroin 2 [Nephila clavata]
Length = 301
Score = 37.7 bits (86), Expect = 0.066
Identities = 26/70 (37%), Positives = 31/70 (44%), Gaps = 5/70 (7%)
Frame = +1
Query: 127 GAYGAGPARPLREDSAAAADAPGLPGFSWH-----RWPPCSPGSGLTTKDGHGSSSFKGN 291
G YG G P SAAAA A G G+ R+ P PGS G G++ +
Sbjct: 193 GGYGPGQKGPSGPGSAAAAAAAGPGGYGPSQQGPARYGPSGPGSAAAAAAGAGTAGYGPG 252
Query: 292 SQRSAAACLL 321
Q SAAA L
Sbjct: 253 PQASAAASRL 262
Score = 31.6 bits (70), Expect = 4.7
Identities = 24/67 (35%), Positives = 28/67 (40%), Gaps = 5/67 (7%)
Frame = +1
Query: 127 GAYGAGPARPLREDSAAAADAPGLP-GFSWHRWPPCSPGSGLTTKDGHGSSSF----KGN 291
G YG G RP AAAA A P G+ + P PGS G G + KG
Sbjct: 143 GGYGPGQQRPSGPGGAAAAAAAAGPGGYGPSQRGPSGPGSAAAAAAGAGPGGYGPGQKGP 202
Query: 292 SQRSAAA 312
S +AA
Sbjct: 203 SGPGSAA 209
Score = 30.8 bits (68), Expect = 8.1
Identities = 26/71 (36%), Positives = 32/71 (44%), Gaps = 1/71 (1%)
Frame = +1
Query: 127 GAYG-AGPARPLREDSAAAADAPGLPGFSWHRWPPCSPGSGLTTKDGHGSSSFKGNSQRS 303
G YG +GP+ P SAAAA A G G+ + P G G G+G S G +
Sbjct: 33 GGYGPSGPSGP-GGASAAAAAAAGPGGYGPGQQGPGQQGPGQQGPAGYGPSGPSGPGGAA 91
Query: 304 AAACLLRGLRG 336
AAA G G
Sbjct: 92 AAAAAAAGPGG 102
Score = 30.8 bits (68), Expect = 8.1
Identities = 23/67 (34%), Positives = 29/67 (42%), Gaps = 2/67 (2%)
Frame = +1
Query: 118 GFNGAYGAGPARPLRED--SAAAADAPGLPGFSWHRWPPCSPGSGLTTKDGHGSSSFKGN 291
G G G GP+ P +AAAA A G G+ + P G G G+G S G
Sbjct: 72 GQQGPAGYGPSGPSGPGGAAAAAAAAAGPGGYGLGQQGPGQQGPGQQGPAGYGPSGLSGP 131
Query: 292 SQRSAAA 312
+AAA
Sbjct: 132 GGAAAAA 138
>dbj|BAB28458.1| unnamed protein product [Mus musculus]
Length = 150
Score = 37.4 bits (85), Expect = 0.087
Identities = 27/73 (36%), Positives = 32/73 (42%)
Frame = +1
Query: 115 NGFNGAYGAGPARPLREDSAAAADAPGLPGFSWHRWPPCSPGSGLTTKDGHGSSSFKGNS 294
N F GA G GP P + D G P H PPC PG G T G++S +G +
Sbjct: 25 NNFRGALGGGPRPP------SPRDGYGSP----HHTPPCGPGLGRT-----GAASLRGTA 69
Query: 295 QRSAAACLLRGLR 333
S A GLR
Sbjct: 70 ATSRGAA--SGLR 80
>dbj|BAB13373.1| KIAA1547 protein [Homo sapiens]
Length = 863
Score = 35.4 bits (80), Expect = 0.33
Identities = 28/72 (38%), Positives = 31/72 (42%), Gaps = 1/72 (1%)
Frame = -3
Query: 347 CSHSPRSPRSKQAAALRWLLPLKLLLPCPSLVVRPLPGLQG-GQRCHEKPGRPGASAAAA 171
C SPR R+K A A R P L P P L V G G RC + G PGAS+
Sbjct: 13 CPPSPR--RTKPAPAARPRRPPTTLPPAPRLFVSTWGGRPTLGFRCENELGGPGASSRFP 70
Query: 170 ESSRKGLAGPAP 135
GL P P
Sbjct: 71 GRPPLGLGSPLP 82
>ref|NP_793444.1| membrane protein, putative [Pseudomonas syringae pv. tomato str.
DC3000] gi|28854074|gb|AAO57139.1| membrane protein,
putative [Pseudomonas syringae pv. tomato str. DC3000]
Length = 421
Score = 34.3 bits (77), Expect = 0.73
Identities = 17/38 (44%), Positives = 21/38 (54%), Gaps = 1/38 (2%)
Frame = -3
Query: 269 PCPSLVVRPLPGLQ-GGQRCHEKPGRPGASAAAAESSR 159
P P +V +PLPG GG R EKP P A AE ++
Sbjct: 295 PAPKIVYQPLPGTAVGGHRADEKPAAPLTPPAQAEPAK 332
