KCC002656A_c01
[Fasta Sequence]
[Nr Search]
[EST assemble image]
Fasta Sequence
>KCC002656A_C01 KCC002656A_c01
CCTCTCACCGAGACACAGACAATCCTTCCAGGTTCGGGTTTGCCTGTGCCTCGCGCGAGA
ACGCCATGTCGCTGGCGACGCGGCGCTTCGGCGCCGCAGCGGCGCTTCTAGTCGCCGCAT
GCGTGCTGTGCACAGCTCCTGCGTGGGCCCAGAATGAGACTTCTGGCACCGGCATGGTCA
AGACGAAGAGCGCCTTCCGTTGGATTCGCCCGCCTCCCGCCCGCCCGCCTCCCTTCCGAC
GGACTCCGACTGCGCAGGTCCCGTATGTGCACAAGGTCGAGTACACGGAG
Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC002656A_C01 KCC002656A_c01
(290 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAB68382.1| gametolysin [Chlamydomonas reinhardtii] gi|15718... 154 4e-37
sp|P31178|GLE_CHLRE Autolysin precursor (Gametolysin) (Gamete ly... 151 3e-36
ref|NP_173107.1| arginine/serine-rich protein, putative [Arabido... 40 0.007
gb|AAK76509.1| putative arginine/serine-rich protein [Arabidopsi... 40 0.007
gb|AAF06353.1|AF199413_1 thymidine kinase [Pseudorabies virus] 40 0.009
>dbj|BAB68382.1| gametolysin [Chlamydomonas reinhardtii] gi|15718395|dbj|BAB68384.1|
gametolysin [Chlamydomonas reinhardtii]
Length = 639
Score = 154 bits (388), Expect = 4e-37
Identities = 73/75 (97%), Positives = 73/75 (97%)
Frame = +3
Query: 66 MSLATRRFGAAAALLVAACVLCTAPAWAQNETSGTGMVKTKSAFRWIRPPPARPPPFRRT 245
MSLATRRFGAAAALLVAACVLCTAPAWAQNETSGTGMVKTKSAFRWIRPPPARPPPFRR
Sbjct: 1 MSLATRRFGAAAALLVAACVLCTAPAWAQNETSGTGMVKTKSAFRWIRPPPARPPPFRRP 60
Query: 246 PTAQVPYVHKVEYTE 290
P AQVPYVHKVEYTE
Sbjct: 61 PPAQVPYVHKVEYTE 75
>sp|P31178|GLE_CHLRE Autolysin precursor (Gametolysin) (Gamete lytic enzyme) (GLE)
gi|541537|pir||A45287 gamete lytic enzyme (EC 3.4.24.-)
precursor - Chlamydomonas reinhardtii
gi|167439|gb|AAA33094.1| cell wall lytic enzyme
gi|217895|dbj|BAA01400.1| GLE preproprotein
[Chlamydomonas reinhardtii]
Length = 638
Score = 151 bits (381), Expect = 3e-36
Identities = 71/75 (94%), Positives = 72/75 (95%)
Frame = +3
Query: 66 MSLATRRFGAAAALLVAACVLCTAPAWAQNETSGTGMVKTKSAFRWIRPPPARPPPFRRT 245
MSLATRRFGAAAALLVAACVLCTAPAWAQNET+GTGMVKTKSAFRWIRPPPARPPPFRR
Sbjct: 1 MSLATRRFGAAAALLVAACVLCTAPAWAQNETTGTGMVKTKSAFRWIRPPPARPPPFRRP 60
Query: 246 PTAQVPYVHKVEYTE 290
P AQ PYVHKVEYTE
Sbjct: 61 PPAQTPYVHKVEYTE 75
>ref|NP_173107.1| arginine/serine-rich protein, putative [Arabidopsis thaliana]
gi|25402809|pir||C86301 arginine/serine-rich protein
[imported] - Arabidopsis thaliana
gi|6601502|gb|AAF19004.1|AF151366_1 arginine/serine-rich
protein [Arabidopsis thaliana]
gi|9989058|gb|AAG10821.1|AC011808_9 arginine/serine-rich
protein [Arabidopsis thaliana]
Length = 414
Score = 40.4 bits (93), Expect = 0.007
Identities = 31/86 (36%), Positives = 39/86 (45%)
Frame = +1
Query: 31 GSGLPVPRARTPCRWRRGASAPQRRF*SPHACCAQLLRGPRMRLLAPAWSRRRAPSVGFA 210
G P R +P R R +S P RR+ SP + +RG +R +P RRR+P
Sbjct: 262 GDTPPRRRPASPSRGRSPSSPPPRRYRSPPRGSPRRIRGSPVRRRSPLPLRRRSPPPRRL 321
Query: 211 RLPPARLPSDGLRLRRSRMCTRSSTR 288
R PP R P RRSR R R
Sbjct: 322 RSPPRRSPI----RRRSRSPIRRPGR 343
>gb|AAK76509.1| putative arginine/serine-rich protein [Arabidopsis thaliana]
Length = 414
Score = 40.4 bits (93), Expect = 0.007
Identities = 31/86 (36%), Positives = 39/86 (45%)
Frame = +1
Query: 31 GSGLPVPRARTPCRWRRGASAPQRRF*SPHACCAQLLRGPRMRLLAPAWSRRRAPSVGFA 210
G P R +P R R +S P RR+ SP + +RG +R +P RRR+P
Sbjct: 262 GDTPPRRRPASPSRGRSPSSPPPRRYRSPPRGSPRRIRGSPVRRRSPLPLRRRSPPPRRL 321
Query: 211 RLPPARLPSDGLRLRRSRMCTRSSTR 288
R PP R P RRSR R R
Sbjct: 322 RSPPRRSPI----RRRSRSPIRRPGR 343
>gb|AAF06353.1|AF199413_1 thymidine kinase [Pseudorabies virus]
Length = 297
Score = 40.0 bits (92), Expect = 0.009
Identities = 32/94 (34%), Positives = 44/94 (46%), Gaps = 5/94 (5%)
Frame = -3
Query: 285 CTRPCAHTGPAQS---ESVGREAGGREAGESNGRRSSS*PC-RCQKSHSGPTQELCTARM 118
C+R CA + P S ++ R A G G RR+S+ PC +S S + +
Sbjct: 177 CSRACATSTPCWSTRRATLARGAAGATTG--GARRASTRPCATASRSTSSAARATAPSSR 234
Query: 117 RRLEAPLRRRSAASPATWRSR-ARHRQTRTWKDC 19
A RR S+A+ A RSR R R TR+W C
Sbjct: 235 TPSSARTRRPSSATGAGARSRCTRGRWTRSWPSC 268
EST assemble image
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|
clone |
accession |
position |
1 |
HCL079e11_r |
AV643981 |
1 |
375 |
2 |
LCL083c08_r |
AV630723 |
85 |
380 |
3 |
LCL024a04_r |
AV627264 |
102 |
297 |
|
Chlamydomonas reinhardtii
Kazusa DNA Research Institute