KCC002656A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC002656A_C01 KCC002656A_c01
CCTCTCACCGAGACACAGACAATCCTTCCAGGTTCGGGTTTGCCTGTGCCTCGCGCGAGA
ACGCCATGTCGCTGGCGACGCGGCGCTTCGGCGCCGCAGCGGCGCTTCTAGTCGCCGCAT
GCGTGCTGTGCACAGCTCCTGCGTGGGCCCAGAATGAGACTTCTGGCACCGGCATGGTCA
AGACGAAGAGCGCCTTCCGTTGGATTCGCCCGCCTCCCGCCCGCCCGCCTCCCTTCCGAC
GGACTCCGACTGCGCAGGTCCCGTATGTGCACAAGGTCGAGTACACGGAG


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC002656A_C01 KCC002656A_c01
         (290 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

dbj|BAB68382.1| gametolysin [Chlamydomonas reinhardtii] gi|15718...   154  4e-37
sp|P31178|GLE_CHLRE Autolysin precursor (Gametolysin) (Gamete ly...   151  3e-36
ref|NP_173107.1| arginine/serine-rich protein, putative [Arabido...    40  0.007
gb|AAK76509.1| putative arginine/serine-rich protein [Arabidopsi...    40  0.007
gb|AAF06353.1|AF199413_1 thymidine kinase [Pseudorabies virus]         40  0.009

>dbj|BAB68382.1| gametolysin [Chlamydomonas reinhardtii] gi|15718395|dbj|BAB68384.1|
           gametolysin [Chlamydomonas reinhardtii]
          Length = 639

 Score =  154 bits (388), Expect = 4e-37
 Identities = 73/75 (97%), Positives = 73/75 (97%)
 Frame = +3

Query: 66  MSLATRRFGAAAALLVAACVLCTAPAWAQNETSGTGMVKTKSAFRWIRPPPARPPPFRRT 245
           MSLATRRFGAAAALLVAACVLCTAPAWAQNETSGTGMVKTKSAFRWIRPPPARPPPFRR 
Sbjct: 1   MSLATRRFGAAAALLVAACVLCTAPAWAQNETSGTGMVKTKSAFRWIRPPPARPPPFRRP 60

Query: 246 PTAQVPYVHKVEYTE 290
           P AQVPYVHKVEYTE
Sbjct: 61  PPAQVPYVHKVEYTE 75

>sp|P31178|GLE_CHLRE Autolysin precursor (Gametolysin) (Gamete lytic enzyme) (GLE)
           gi|541537|pir||A45287 gamete lytic enzyme (EC 3.4.24.-)
           precursor - Chlamydomonas reinhardtii
           gi|167439|gb|AAA33094.1| cell wall lytic enzyme
           gi|217895|dbj|BAA01400.1| GLE preproprotein
           [Chlamydomonas reinhardtii]
          Length = 638

 Score =  151 bits (381), Expect = 3e-36
 Identities = 71/75 (94%), Positives = 72/75 (95%)
 Frame = +3

Query: 66  MSLATRRFGAAAALLVAACVLCTAPAWAQNETSGTGMVKTKSAFRWIRPPPARPPPFRRT 245
           MSLATRRFGAAAALLVAACVLCTAPAWAQNET+GTGMVKTKSAFRWIRPPPARPPPFRR 
Sbjct: 1   MSLATRRFGAAAALLVAACVLCTAPAWAQNETTGTGMVKTKSAFRWIRPPPARPPPFRRP 60

Query: 246 PTAQVPYVHKVEYTE 290
           P AQ PYVHKVEYTE
Sbjct: 61  PPAQTPYVHKVEYTE 75

>ref|NP_173107.1| arginine/serine-rich protein, putative [Arabidopsis thaliana]
           gi|25402809|pir||C86301 arginine/serine-rich protein
           [imported] - Arabidopsis thaliana
           gi|6601502|gb|AAF19004.1|AF151366_1 arginine/serine-rich
           protein [Arabidopsis thaliana]
           gi|9989058|gb|AAG10821.1|AC011808_9 arginine/serine-rich
           protein [Arabidopsis thaliana]
          Length = 414

 Score = 40.4 bits (93), Expect = 0.007
 Identities = 31/86 (36%), Positives = 39/86 (45%)
 Frame = +1

Query: 31  GSGLPVPRARTPCRWRRGASAPQRRF*SPHACCAQLLRGPRMRLLAPAWSRRRAPSVGFA 210
           G   P  R  +P R R  +S P RR+ SP     + +RG  +R  +P   RRR+P     
Sbjct: 262 GDTPPRRRPASPSRGRSPSSPPPRRYRSPPRGSPRRIRGSPVRRRSPLPLRRRSPPPRRL 321

Query: 211 RLPPARLPSDGLRLRRSRMCTRSSTR 288
           R PP R P      RRSR   R   R
Sbjct: 322 RSPPRRSPI----RRRSRSPIRRPGR 343

>gb|AAK76509.1| putative arginine/serine-rich protein [Arabidopsis thaliana]
          Length = 414

 Score = 40.4 bits (93), Expect = 0.007
 Identities = 31/86 (36%), Positives = 39/86 (45%)
 Frame = +1

Query: 31  GSGLPVPRARTPCRWRRGASAPQRRF*SPHACCAQLLRGPRMRLLAPAWSRRRAPSVGFA 210
           G   P  R  +P R R  +S P RR+ SP     + +RG  +R  +P   RRR+P     
Sbjct: 262 GDTPPRRRPASPSRGRSPSSPPPRRYRSPPRGSPRRIRGSPVRRRSPLPLRRRSPPPRRL 321

Query: 211 RLPPARLPSDGLRLRRSRMCTRSSTR 288
           R PP R P      RRSR   R   R
Sbjct: 322 RSPPRRSPI----RRRSRSPIRRPGR 343

>gb|AAF06353.1|AF199413_1 thymidine kinase [Pseudorabies virus]
          Length = 297

 Score = 40.0 bits (92), Expect = 0.009
 Identities = 32/94 (34%), Positives = 44/94 (46%), Gaps = 5/94 (5%)
 Frame = -3

Query: 285 CTRPCAHTGPAQS---ESVGREAGGREAGESNGRRSSS*PC-RCQKSHSGPTQELCTARM 118
           C+R CA + P  S    ++ R A G   G    RR+S+ PC    +S S   +    +  
Sbjct: 177 CSRACATSTPCWSTRRATLARGAAGATTG--GARRASTRPCATASRSTSSAARATAPSSR 234

Query: 117 RRLEAPLRRRSAASPATWRSR-ARHRQTRTWKDC 19
               A  RR S+A+ A  RSR  R R TR+W  C
Sbjct: 235 TPSSARTRRPSSATGAGARSRCTRGRWTRSWPSC 268



EST assemble image


clone accession position
1 HCL079e11_r AV643981 1 375
2 LCL083c08_r AV630723 85 380
3 LCL024a04_r AV627264 102 297




Chlamydomonas reinhardtii
Kazusa DNA Research Institute