Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC002655A_C01 KCC002655A_c01
(702 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|ZP_00126001.1| COG1172: Ribose/xylose/arabinose/galactoside ... 36 0.65
dbj|BAB17154.1| P0698A04.15 [Oryza sativa (japonica cultivar-gro... 35 1.5
pir||T46388 hypothetical protein DKFZp434A1820.1 - human (fragme... 34 1.9
gb|AAG30103.1|AF282130_66 RSORF2 ICP4 regulatory protein [Meleag... 34 1.9
ref|NP_073381.1| RS1 immediate-early gene transactivator, ICP4 l... 34 1.9
>ref|ZP_00126001.1| COG1172: Ribose/xylose/arabinose/galactoside ABC-type transport
systems, permease components [Pseudomonas syringae pv.
syringae B728a]
Length = 343
Score = 35.8 bits (81), Expect = 0.65
Identities = 30/78 (38%), Positives = 34/78 (43%), Gaps = 10/78 (12%)
Frame = +2
Query: 308 RQSPQAYMGAGCGCAGGQL-TPRRSWS--PLAHMPIACMQLGEGRRGRGRRTG------- 457
R P +GAG GC GGQ PR WS P A + IAC L G TG
Sbjct: 90 RHRPVGRLGAGAGCFGGQCGNPRLGWSVFPAALLGIACATLA------GTITGSITVAWR 143
Query: 458 IRSFVGRAFACVWARGSA 511
I SF+ ARG+A
Sbjct: 144 IPSFIVSLGVLEMARGAA 161
>dbj|BAB17154.1| P0698A04.15 [Oryza sativa (japonica cultivar-group)]
gi|14090230|dbj|BAB55491.1| P0494A10.31 [Oryza sativa
(japonica cultivar-group)]
Length = 348
Score = 34.7 bits (78), Expect = 1.5
Identities = 19/58 (32%), Positives = 26/58 (44%)
Frame = +2
Query: 332 GAGCGCAGGQLTPRRSWSPLAHMPIACMQLGEGRRGRGRRTGIRSFVGRAFACVWARG 505
G GCG GG+ + H+ +A + G RGRG + + SF AC A G
Sbjct: 41 GGGCGSGGGEPPETGKTAGRGHLIVAASRRKRGGRGRGLASTVDSFRPAGEACGGAMG 98
>pir||T46388 hypothetical protein DKFZp434A1820.1 - human (fragment)
gi|6808227|emb|CAB70803.1| hypothetical protein [Homo
sapiens]
Length = 129
Score = 34.3 bits (77), Expect = 1.9
Identities = 24/81 (29%), Positives = 38/81 (46%)
Frame = -3
Query: 574 CVDLPFASSPERVLEHCSGIAGTASRPHTRKGPAHKRANTGTSPTPSPTFS*LHARNRHM 395
C L +S P R S ++GTA++P + K+ ++ S TP P+ +H N
Sbjct: 3 CHTLVCSSLPRR-----SAVSGTATQPRAAAVHSSKKPSSTPSSTPGPSAQIIHPSNGR- 56
Query: 394 C*RGPGPPGGQLTARAAAART 332
RG G P +L A+ +T
Sbjct: 57 --RGRGRPPQKLRAQELTLQT 75
>gb|AAG30103.1|AF282130_66 RSORF2 ICP4 regulatory protein [Meleagrid herpesvirus 1]
Length = 2161
Score = 34.3 bits (77), Expect = 1.9
Identities = 30/93 (32%), Positives = 38/93 (40%), Gaps = 8/93 (8%)
Frame = -3
Query: 619 PPVTPTDPKSHAESGCVDLPFASSPERVLEHCSGIAGTA-SRPH-------TRKGPAHKR 464
P V+P+ S SG D S ER H SG+ SRPH R P+ K
Sbjct: 1009 PSVSPSSRSS--SSGTSDSSATSGSER--RHRSGLQDNRNSRPHGSARGRAARLCPSEKN 1064
Query: 463 ANTGTSPTPSPTFS*LHARNRHMC*RGPGPPGG 365
+ SPTP P+ + R+ P PP G
Sbjct: 1065 LSPSGSPTPGPSCAATRPRSSEPLIEVPDPPRG 1097
>ref|NP_073381.1| RS1 immediate-early gene transactivator, ICP4 like protein [Meleagrid
herpesvirus 1] gi|12084920|ref|NP_073366.1| RS1
immediate-early gene transactivator, ICP4 like protein
[Meleagrid herpesvirus 1]
gi|12025192|gb|AAG45818.1|AF291866_85 RS1 immediate-early
gene transactivator, ICP4 like protein [Meleagrid
herpesvirus 1] gi|12025203|gb|AAG45829.1|AF291866_96 RS1
immediate-early gene transactivator, ICP4 like protein
[Meleagrid herpesvirus 1]
Length = 2164
Score = 34.3 bits (77), Expect = 1.9
Identities = 30/93 (32%), Positives = 38/93 (40%), Gaps = 8/93 (8%)
Frame = -3
Query: 619 PPVTPTDPKSHAESGCVDLPFASSPERVLEHCSGIAGTA-SRPH-------TRKGPAHKR 464
P V+P+ S SG D S ER H SG+ SRPH R P+ K
Sbjct: 1010 PSVSPSSRSS--SSGTSDSSATSGSER--RHRSGLQDNRNSRPHGSARGRAARLCPSEKN 1065
Query: 463 ANTGTSPTPSPTFS*LHARNRHMC*RGPGPPGG 365
+ SPTP P+ + R+ P PP G
Sbjct: 1066 LSPSGSPTPGPSCAATRPRSSEPLIEVPDPPRG 1098
