KCC002654A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC002654A_C01 KCC002654A_c01
caaaacgtgctcaagtcgacggtcccagtaatgggacaaaaaatcctgtacttatacgcc
taccaacaatttgtttggtaCATGTTCCTCAGCGCCCAAGACCAAACATCCGGCTCCACT
GTTGATAACGCTAGCTCGTTCCACAACTGCAATCCTAGCCATACCGAAACGTCTGCGAAG
TGCTGAACCATGCGTGACCGTCAAATGGCTGGACGAAGCTGGGTCGCAGCGCTGGACGTG
CCTTCCTGGCTTGTCAACGGCGGAGAAATGGCAAGGCTGCGCGTCTTGCTTCTGCGGAAA
TCTCAGGAGGAGGCCTCGCTGCTTGTCTCGGGCTTACCAGACGTGGCTGCAGAGGCAATA
AAGGAGATCCTTCGCCAGGAAGGTCGCAAATGCGGAAGCCGAGCAAATGCAAACCGAGGG
CCTCCTGCTGAATTTCTTGAGGTTGGCGCGAGGCCCCGGACGCGGAGACGGGTGCGGAGA
GGTGGAAGACGC


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC002654A_C01 KCC002654A_c01
         (492 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|XP_046581.6| similar to KIAA1511 protein [Homo sapiens]            37  0.13
dbj|BAC38556.1| unnamed protein product [Mus musculus]                 35  0.65
ref|NP_732413.1| CG31212-PA [Drosophila melanogaster] gi|2317171...    34  0.85
gb|AAL39931.1| SD02886p [Drosophila melanogaster]                      34  0.85
ref|XP_297801.2| hypothetical protein XP_297801 [Homo sapiens]         33  1.9

>ref|XP_046581.6| similar to KIAA1511 protein [Homo sapiens]
          Length = 1294

 Score = 37.0 bits (84), Expect = 0.13
 Identities = 22/53 (41%), Positives = 27/53 (50%)
 Frame = -3

Query: 472 PVSASGASRQPQEIQQEALGLHLLGFRICDLPGEGSPLLPLQPRLVSPRQAAR 314
           PV AS A+R P+   +   G   L  R    PG GSPL P   R++SPR   R
Sbjct: 24  PVFASAAARTPRAASRYPAGRPRLPSRRAPGPGRGSPLGPAGSRVLSPRPPRR 76

>dbj|BAC38556.1| unnamed protein product [Mus musculus]
          Length = 185

 Score = 34.7 bits (78), Expect = 0.65
 Identities = 22/55 (40%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
 Frame = +1

Query: 322 LVSGLPDVAAEAIKEILRQ-EGRKCGSRANANRGPPAEFLEVGARPRTRRRVRRG 483
           +V   PD ++ A   ++R  EGR+ G RA A+ GP +  L V AR R R    RG
Sbjct: 1   MVGARPDYSSRAPLSLVRAPEGRQVGGRAEAHLGPSSRGLLVRARVRRRAGGGRG 55

>ref|NP_732413.1| CG31212-PA [Drosophila melanogaster] gi|23171713|gb|AAF55658.2|
            CG31212-PA [Drosophila melanogaster]
          Length = 1638

 Score = 34.3 bits (77), Expect = 0.85
 Identities = 26/79 (32%), Positives = 37/79 (45%)
 Frame = +3

Query: 228  SAGRAFLACQRRRNGKAARLASAEISGGGLAACLGLTRRGCRGNKGDPSPGRSQMRKPSK 407
            +A +A  A      G ++ L   E+SGGG  A + L     R +    SPG S  R P +
Sbjct: 1517 TASQAAAAGTGAAAGTSSPLPQQEVSGGGDNAGVPLHEEEYRTSPSGQSPGVSCKRGPGR 1576

Query: 408  CKPRASC*IS*GWREAPDA 464
             + + +  IS G R AP A
Sbjct: 1577 PRSKTATPISRGTRGAPRA 1595

>gb|AAL39931.1| SD02886p [Drosophila melanogaster]
          Length = 1638

 Score = 34.3 bits (77), Expect = 0.85
 Identities = 26/79 (32%), Positives = 37/79 (45%)
 Frame = +3

Query: 228  SAGRAFLACQRRRNGKAARLASAEISGGGLAACLGLTRRGCRGNKGDPSPGRSQMRKPSK 407
            +A +A  A      G ++ L   E+SGGG  A + L     R +    SPG S  R P +
Sbjct: 1517 TASQAAAAGTGAAAGTSSPLPQQEVSGGGDNAGVPLHEEEYRTSPSGQSPGVSCKRGPGR 1576

Query: 408  CKPRASC*IS*GWREAPDA 464
             + + +  IS G R AP A
Sbjct: 1577 PRSKTATPISRGTRGAPRA 1595

>ref|XP_297801.2| hypothetical protein XP_297801 [Homo sapiens]
          Length = 356

 Score = 33.1 bits (74), Expect = 1.9
 Identities = 22/70 (31%), Positives = 35/70 (49%), Gaps = 2/70 (2%)
 Frame = +3

Query: 216 KLGRSAGRAFLACQRRRNGKAARLASAEISGGGLAACLGLTRRGCRGNKGDPSPGRSQMR 395
           K+GR AGR  L   + R    ++    ++   G A+C G +     G +G+    R+++R
Sbjct: 205 KMGRPAGRDVLLRSQHRRQAGSQGFRVQLLTEGGASCTGASAPSPEGERGE----RAELR 260

Query: 396 KPS--KCKPR 419
            PS  K KPR
Sbjct: 261 GPSILKAKPR 270



EST assemble image


clone accession position
1 HCL079a04_r AV643950 1 492
2 MXL033g08_r BP094982 114 481




Chlamydomonas reinhardtii
Kazusa DNA Research Institute