Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC002652A_C01 KCC002652A_c01
(653 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_191587.1| uclacyanin 3 [Arabidopsis thaliana] gi|11250060... 48 1e-04
ref|NP_871800.1| HMG-I and HMG-Y DNA-binding domain containing p... 48 1e-04
emb|CAE01965.1| OSJNBa0085H03.6 [Oryza sativa (japonica cultivar... 46 4e-04
ref|ZP_00055313.1| COG3898: Uncharacterized membrane-bound prote... 46 6e-04
gb|AAC33839.1| 2-aminomuconic acid semialdehyde dehydrogenase [P... 45 7e-04
>ref|NP_191587.1| uclacyanin 3 [Arabidopsis thaliana] gi|11250060|pir||T49223
uclacyanin 3 [imported] - Arabidopsis thaliana
gi|1518059|gb|AAB07009.1| blue-copper binging protein
III [Arabidopsis thaliana] gi|3395770|gb|AAC32461.1|
uclacyanin 3 [Arabidopsis thaliana]
gi|7576204|emb|CAB87865.1| uclacyanin 3 [Arabidopsis
thaliana]
Length = 222
Score = 48.1 bits (113), Expect = 1e-04
Identities = 32/78 (41%), Positives = 43/78 (55%), Gaps = 11/78 (14%)
Frame = +2
Query: 296 NTMPYPVG*LASSAEPSTPQSP--TCSSASRQPIMPSTP---------PPPALKPA*SVK 442
N M V LA++ PSTP SP T S+ S P PSTP P P+L P+ S+
Sbjct: 110 NGMKLAVPVLAAAPSPSTPSSPPSTPSTPSSPPSTPSTPSSPPSPPSPPSPSLPPS-SLP 168
Query: 443 SAASPPSSGRPRSASIAP 496
+ASPP++G P S ++ P
Sbjct: 169 PSASPPTNGTPDSETLTP 186
>ref|NP_871800.1| HMG-I and HMG-Y DNA-binding domain containing protein (1N394)
[Caenorhabditis elegans] gi|7509445|pir||T26517
hypothetical protein Y18D10A.1 - Caenorhabditis elegans
gi|3979929|emb|CAA22308.1| Hypothetical protein
Y18D10A.1 [Caenorhabditis elegans]
Length = 1634
Score = 47.8 bits (112), Expect = 1e-04
Identities = 34/97 (35%), Positives = 50/97 (51%), Gaps = 6/97 (6%)
Frame = +2
Query: 278 RRSTRTNTMPYPVG*LASSAEPSTPQSPTCSSASRQPIMPSTPPPPALKPA*SVKSAASP 457
RRS R + +P +SS++ P SP+ S+ R+ P T +++PA +A +P
Sbjct: 486 RRSARLSALPVTPKKASSSSKMPPPPSPSPSTPGRRGRRPRTLSTMSMEPA---AAAVTP 542
Query: 458 PSSGRPRSASIAPQA------SVAASAPARRRRRQPR 550
GRPRS S A + S A SAP +R R +PR
Sbjct: 543 APRGRPRSRSAAKVSENTEPLSEAPSAPVKRGRGRPR 579
>emb|CAE01965.1| OSJNBa0085H03.6 [Oryza sativa (japonica cultivar-group)]
Length = 299
Score = 46.2 bits (108), Expect = 4e-04
Identities = 35/99 (35%), Positives = 46/99 (46%), Gaps = 6/99 (6%)
Frame = +2
Query: 329 SSAEPSTPQSPTCSSASRQPI-MPSTPPPPALKPA*SVKSAASPPSSGRPRSASIAPQAS 505
S P +P +P +SA P P+ PPPP PA + KSA S P P+ A A A
Sbjct: 145 SPPPPPSPPAPLPASAPLAPSPAPAPPPPPPPPPAPAAKSAPSGPWQTTPQPAPAAKSAP 204
Query: 506 VAASAPA---RRRRRQPRCGRRLMSRRC--PRTGALPRR 607
APA R R+ +P R + + PR AL +R
Sbjct: 205 TPQPAPAAKSRSRQYEPAPSRPMKKAKSDEPRLPALKKR 243
>ref|ZP_00055313.1| COG3898: Uncharacterized membrane-bound protein [Magnetospirillum
magnetotacticum]
Length = 711
Score = 45.8 bits (107), Expect = 6e-04
Identities = 43/136 (31%), Positives = 50/136 (36%), Gaps = 10/136 (7%)
Frame = +2
Query: 230 PRQGRLALRRSK*RRARRSTRTNTMPYPVG*LASSAEPSTPQSPTCSSASRQPIMPSTP- 406
P GR + RS+ RRA R P P G P+ C RQP P
Sbjct: 115 PPSGRRTVARSRRRRAELRVRMARRPRPGGRGQRKPRPARRAEALCGHGHRQPRHPGATL 174
Query: 407 ------PPPALKPA*SVKSAASPPSSGRPRSASIAPQASVAASAPARRRRRQPRCG--RR 562
P P PA + AS P G + P P RRR +PR G +
Sbjct: 175 RDPGPRPDPRRNPARRRRLVASYP--GPAAVSGHHPPRGRRGPGPERRRHHRPRPGGHQP 232
Query: 563 LMSRRCP-RTGALPRR 607
S RCP R G L RR
Sbjct: 233 RRSGRCPGRAGRLERR 248
>gb|AAC33839.1| 2-aminomuconic acid semialdehyde dehydrogenase [Pseudomonas
pseudoalcaligenes]
Length = 542
Score = 45.4 bits (106), Expect = 7e-04
Identities = 50/167 (29%), Positives = 61/167 (35%), Gaps = 26/167 (15%)
Frame = +3
Query: 138 WPTTAHSRAALHTTA-IMPPSARAGATVGISDLG--------KGGWPY------------ 254
WP T RAA + + P RA G GG+P
Sbjct: 378 WPRTVARRAAAESAGDVGDPGGRASCGAARRSAGGAQRGPHVPGGYPLGTAGATRRVHRA 437
Query: 255 AGASEGVPEEVRGRIQ-CRIQSADWRRPPSRQRLSHR--RAPPPAGSPSC-RAHPRLQL* 422
AGA+ G P G+ Q + S R PP +RL+ R P A P+ RA PR
Sbjct: 438 AGAAGGAPGAGGGKRQRAGLSSRPGRDPPRSRRLARSPWRTPRGAALPAAWRARPRRP-- 495
Query: 423 SRRDP*SRRHLLPALG-GHGARRSRHRHRSPPRRRRGGGGGSRGAAG 560
+RRH G G +HR P RRR GG R AG
Sbjct: 496 ------ARRHRAGVAGHAQGGAGDQHRRDQPDHRRRTGGDRRRPGAG 536
