Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC002645A_C01 KCC002645A_c01
(377 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAK18837.1|AC082645_7 putative alpha-coat protein [Oryza sativa] 94 5e-19
gb|AAK18834.1|AC082645_4 putative alpha-coat protein [Oryza sativa] 92 1e-18
ref|NP_176393.1| coatomer alpha subunit -related [Arabidopsis th... 91 3e-18
emb|CAE45585.1| coatomer alpha subunit-like protein [Lotus corni... 90 7e-18
ref|NP_179734.1| coatomer alpha subunit [Arabidopsis thaliana] g... 89 2e-17
>gb|AAK18837.1|AC082645_7 putative alpha-coat protein [Oryza sativa]
Length = 1218
Score = 94.0 bits (232), Expect = 5e-19
Identities = 58/134 (43%), Positives = 76/134 (56%), Gaps = 9/134 (6%)
Frame = +2
Query: 2 FAVLDKSTNSIQIRNLQNEITKKVPTPCATTDAIFYAGTGMLLCRSGG-------QGDAV 160
FAVL+KS+N + +RNL+NEI KK P P A TDAI+YAGTG LLC++ Q +
Sbjct: 426 FAVLEKSSNQVLVRNLKNEIVKKSPLPIA-TDAIYYAGTGSLLCKAEDRVTIFDLQQRLI 484
Query: 161 RHPAAAP--PWPTWPRPSSSTWCGTPTCPWWRCCPSTAIIIADKRLGGAQTVHETIRVKS 334
AP + W S A++IA+K+L T+HETIRVKS
Sbjct: 485 LGELQAPSVKYVVWSSDMESV----------ALLSKHAVVIANKKLVHRCTLHETIRVKS 534
Query: 335 AAWDDSGVLLYTTL 376
AWD++GV +YTTL
Sbjct: 535 GAWDENGVFIYTTL 548
Score = 40.0 bits (92), Expect(2) = 9e-05
Identities = 17/27 (62%), Positives = 21/27 (76%)
Frame = +1
Query: 184 MADLATPFVKYVVWNTDMSMVALLSKH 264
+ +L P VKYVVW++DM VALLSKH
Sbjct: 485 LGELQAPSVKYVVWSSDMESVALLSKH 511
Score = 25.8 bits (55), Expect(2) = 9e-05
Identities = 10/16 (62%), Positives = 14/16 (87%)
Frame = +3
Query: 141 EDKVTLFDIQQLLLHG 188
ED+VT+FD+QQ L+ G
Sbjct: 471 EDRVTIFDLQQRLILG 486
>gb|AAK18834.1|AC082645_4 putative alpha-coat protein [Oryza sativa]
Length = 1218
Score = 92.4 bits (228), Expect = 1e-18
Identities = 57/134 (42%), Positives = 76/134 (56%), Gaps = 9/134 (6%)
Frame = +2
Query: 2 FAVLDKSTNSIQIRNLQNEITKKVPTPCATTDAIFYAGTGMLLCRSGG-------QGDAV 160
FAVL+KS+N + ++NL+NEI KK P P A TDAI+YAGTG LLC++ Q +
Sbjct: 426 FAVLEKSSNQVLVKNLKNEIVKKSPLPIA-TDAIYYAGTGNLLCKAEDRVTIFDLQQRLI 484
Query: 161 RHPAAAP--PWPTWPRPSSSTWCGTPTCPWWRCCPSTAIIIADKRLGGAQTVHETIRVKS 334
AP + W S A++IA+K+L T+HETIRVKS
Sbjct: 485 LGELQAPSVKYVVWSSDMESV----------ALLSKHAVVIANKKLVHRCTLHETIRVKS 534
Query: 335 AAWDDSGVLLYTTL 376
AWD++GV +YTTL
Sbjct: 535 GAWDENGVFIYTTL 548
Score = 40.0 bits (92), Expect(2) = 9e-05
Identities = 17/27 (62%), Positives = 21/27 (76%)
Frame = +1
Query: 184 MADLATPFVKYVVWNTDMSMVALLSKH 264
+ +L P VKYVVW++DM VALLSKH
Sbjct: 485 LGELQAPSVKYVVWSSDMESVALLSKH 511
Score = 25.8 bits (55), Expect(2) = 9e-05
Identities = 10/16 (62%), Positives = 14/16 (87%)
Frame = +3
Query: 141 EDKVTLFDIQQLLLHG 188
ED+VT+FD+QQ L+ G
Sbjct: 471 EDRVTIFDLQQRLILG 486
>ref|NP_176393.1| coatomer alpha subunit -related [Arabidopsis thaliana]
gi|7444289|pir||T02146 coatomer complex alpha chain
homolog F8K4.21 - Arabidopsis thaliana
gi|3367534|gb|AAC28519.1| Strong similarity to coatamer
alpha subunit (HEPCOP) homolog gb|U24105 from Homo
sapiens. [Arabidopsis thaliana]
Length = 1216
Score = 91.3 bits (225), Expect = 3e-18
Identities = 60/134 (44%), Positives = 72/134 (52%), Gaps = 9/134 (6%)
Frame = +2
Query: 2 FAVLDKSTNSIQIRNLQNEITKKVPTPCATTDAIFYAGTGMLLCRSGG-------QGDAV 160
FAVL+KST+ + ++NL+NE+ KK P P TDAIFYAGTG LLCRS Q V
Sbjct: 426 FAVLEKSTSQVLVKNLKNEVVKKSPLP-IPTDAIFYAGTGNLLCRSEDKVVIFDLQQRLV 484
Query: 161 RHPAAAP--PWPTWPRPSSSTWCGTPTCPWWRCCPSTAIIIADKRLGGAQTVHETIRVKS 334
P + W S IIIA K+L T+HETIRVKS
Sbjct: 485 LGELQTPFVRYVVWSSDMESV----------ALLSKHTIIIASKKLVLQCTLHETIRVKS 534
Query: 335 AAWDDSGVLLYTTL 376
AWDD+GV +YTTL
Sbjct: 535 GAWDDNGVFIYTTL 548
Score = 43.9 bits (102), Expect = 6e-04
Identities = 18/27 (66%), Positives = 23/27 (84%)
Frame = +1
Query: 184 MADLATPFVKYVVWNTDMSMVALLSKH 264
+ +L TPFV+YVVW++DM VALLSKH
Sbjct: 485 LGELQTPFVRYVVWSSDMESVALLSKH 511
>emb|CAE45585.1| coatomer alpha subunit-like protein [Lotus corniculatus var.
japonicus]
Length = 1221
Score = 90.1 bits (222), Expect = 7e-18
Identities = 59/134 (44%), Positives = 72/134 (53%), Gaps = 9/134 (6%)
Frame = +2
Query: 2 FAVLDKSTNSIQIRNLQNEITKKVPTPCATTDAIFYAGTGMLLCRSGG-------QGDAV 160
FAVLDK +N + ++NL+NE+ KK P A TDAIFYAGTG LLCRS Q V
Sbjct: 429 FAVLDKGSNQVFVKNLKNELVKKSVLPIA-TDAIFYAGTGNLLCRSEDRVFIFDLQQRLV 487
Query: 161 RHPAAAP--PWPTWPRPSSSTWCGTPTCPWWRCCPSTAIIIADKRLGGAQTVHETIRVKS 334
P + W S AI+IA K+L T+HETIRVKS
Sbjct: 488 LGDLQTPFIKYVIWSNDMESV----------ALLSKHAIVIASKKLVHQCTLHETIRVKS 537
Query: 335 AAWDDSGVLLYTTL 376
AWD++GV +YTTL
Sbjct: 538 GAWDENGVFIYTTL 551
Score = 45.4 bits (106), Expect(2) = 2e-05
Identities = 18/27 (66%), Positives = 22/27 (80%)
Frame = +1
Query: 184 MADLATPFVKYVVWNTDMSMVALLSKH 264
+ DL TPF+KYV+W+ DM VALLSKH
Sbjct: 488 LGDLQTPFIKYVIWSNDMESVALLSKH 514
Score = 22.7 bits (47), Expect(2) = 2e-05
Identities = 9/16 (56%), Positives = 13/16 (81%)
Frame = +3
Query: 141 EDKVTLFDIQQLLLHG 188
ED+V +FD+QQ L+ G
Sbjct: 474 EDRVFIFDLQQRLVLG 489
>ref|NP_179734.1| coatomer alpha subunit [Arabidopsis thaliana]
gi|25301669|pir||F84600 coatomer alpha subunit
[imported] - Arabidopsis thaliana
gi|4567286|gb|AAD23699.1| coatomer alpha subunit
[Arabidopsis thaliana]
Length = 1218
Score = 88.6 bits (218), Expect = 2e-17
Identities = 59/134 (44%), Positives = 71/134 (52%), Gaps = 9/134 (6%)
Frame = +2
Query: 2 FAVLDKSTNSIQIRNLQNEITKKVPTPCATTDAIFYAGTGMLLCRSGG-------QGDAV 160
FAVL+KST+ + ++NL+NE+ KK P TDAIFYAGTG LLCRS Q V
Sbjct: 426 FAVLEKSTSQVLVKNLKNEVVKKSSLP-IPTDAIFYAGTGNLLCRSEDKVVIFDLQQRLV 484
Query: 161 RHPAAAP--PWPTWPRPSSSTWCGTPTCPWWRCCPSTAIIIADKRLGGAQTVHETIRVKS 334
P + W S IIIA K+L T+HETIRVKS
Sbjct: 485 LGELQTPFVRYVVWSNDMESV----------ALLSKHTIIIASKKLVLQCTLHETIRVKS 534
Query: 335 AAWDDSGVLLYTTL 376
AWDD+GV +YTTL
Sbjct: 535 GAWDDNGVFIYTTL 548
Score = 43.5 bits (101), Expect(2) = 2e-05
Identities = 18/27 (66%), Positives = 22/27 (80%)
Frame = +1
Query: 184 MADLATPFVKYVVWNTDMSMVALLSKH 264
+ +L TPFV+YVVW+ DM VALLSKH
Sbjct: 485 LGELQTPFVRYVVWSNDMESVALLSKH 511
Score = 24.6 bits (52), Expect(2) = 2e-05
Identities = 10/16 (62%), Positives = 13/16 (80%)
Frame = +3
Query: 141 EDKVTLFDIQQLLLHG 188
EDKV +FD+QQ L+ G
Sbjct: 471 EDKVVIFDLQQRLVLG 486
