Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC002642A_C01 KCC002642A_c01
(550 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_566620.1| transducin / WD-40 repeat protein family [Arabi... 110 2e-23
ref|NP_850612.1| transducin / WD-40 repeat protein family [Arabi... 110 2e-23
dbj|BAA92105.1| unnamed protein product [Homo sapiens] 90 2e-17
pir||T43447 hypothetical protein DKFZp434J1217.1 - human gi|6599... 90 2e-17
dbj|BAA91803.1| unnamed protein product [Homo sapiens] 90 2e-17
>ref|NP_566620.1| transducin / WD-40 repeat protein family [Arabidopsis thaliana]
gi|9294695|dbj|BAB03095.1|
emb|CAB63739.1~gene_id:MCB22.3~similar to unknown
protein [Arabidopsis thaliana]
gi|15294240|gb|AAK95297.1|AF410311_1 AT3g18860/MCB22_3
[Arabidopsis thaliana]
Length = 760
Score = 110 bits (274), Expect = 2e-23
Identities = 59/141 (41%), Positives = 89/141 (62%), Gaps = 2/141 (1%)
Frame = +2
Query: 134 EFKLRGELRGHDEDVRGVVVC-PLGVLTGSRDKTVKVWAPDEATG-SYSLVQTLVGHTDF 307
E+KLR EL GHD+DVRG+ VC + T SRD+T++VW+ D + Y+ + L+GHT F
Sbjct: 9 EYKLRCELHGHDDDVRGICVCNDENIATSSRDRTIRVWSLDPSDKRKYTSEKILLGHTSF 68
Query: 308 VVAVLYVPPGANDDYPAGAIVSGSRDKTVRVWDPQTAACVAVLSGHEYQVTALGLLPKAD 487
V + ++PP D+YP G +VSGS D V VW+ + L GH+ QVT + + D
Sbjct: 69 VGPLAWIPP--TDEYPEGRLVSGSMDTFVFVWNLMNGENIQTLKGHQMQVTGVAI----D 122
Query: 488 GQAGGLVSASLDKTVRVWRDG 550
+ +VS+S+D+T++ WR+G
Sbjct: 123 NE--DIVSSSVDQTLKRWRNG 141
Score = 58.2 bits (139), Expect = 7e-08
Identities = 39/129 (30%), Positives = 67/129 (51%)
Frame = +2
Query: 155 LRGHDEDVRGVVVCPLGVLTGSRDKTVKVWAPDEATGSYSLVQTLVGHTDFVVAVLYVPP 334
L+GH V GV + +++ S D+T+K W + LV++ H + AV+ +
Sbjct: 109 LKGHQMQVTGVAIDNEDIVSSSVDQTLKRWRNGQ------LVESWDAHQSPIQAVIRL-- 160
Query: 335 GANDDYPAGAIVSGSRDKTVRVWDPQTAACVAVLSGHEYQVTALGLLPKADGQAGGLVSA 514
P+G +VSGS D ++++W +T+ + LSGH V L ++P G +SA
Sbjct: 161 ------PSGELVSGSSDASLKLWKGKTS--LQTLSGHTDTVRGLAVMPDL-----GFLSA 207
Query: 515 SLDKTVRVW 541
S D ++R+W
Sbjct: 208 SHDGSIRLW 216
>ref|NP_850612.1| transducin / WD-40 repeat protein family [Arabidopsis thaliana]
Length = 760
Score = 110 bits (274), Expect = 2e-23
Identities = 59/141 (41%), Positives = 89/141 (62%), Gaps = 2/141 (1%)
Frame = +2
Query: 134 EFKLRGELRGHDEDVRGVVVC-PLGVLTGSRDKTVKVWAPDEATG-SYSLVQTLVGHTDF 307
E+KLR EL GHD+DVRG+ VC + T SRD+T++VW+ D + Y+ + L+GHT F
Sbjct: 9 EYKLRCELHGHDDDVRGICVCNDENIATSSRDRTIRVWSLDPSDKRKYTSEKILLGHTSF 68
Query: 308 VVAVLYVPPGANDDYPAGAIVSGSRDKTVRVWDPQTAACVAVLSGHEYQVTALGLLPKAD 487
V + ++PP D+YP G +VSGS D V VW+ + L GH+ QVT + + D
Sbjct: 69 VGPLAWIPP--TDEYPEGRLVSGSMDTFVFVWNLMNGENIQTLKGHQMQVTGVAI----D 122
Query: 488 GQAGGLVSASLDKTVRVWRDG 550
+ +VS+S+D+T++ WR+G
Sbjct: 123 NE--DIVSSSVDQTLKRWRNG 141
Score = 58.2 bits (139), Expect = 7e-08
Identities = 39/129 (30%), Positives = 67/129 (51%)
Frame = +2
Query: 155 LRGHDEDVRGVVVCPLGVLTGSRDKTVKVWAPDEATGSYSLVQTLVGHTDFVVAVLYVPP 334
L+GH V GV + +++ S D+T+K W + LV++ H + AV+ +
Sbjct: 109 LKGHQMQVTGVAIDNEDIVSSSVDQTLKRWRNGQ------LVESWDAHQSPIQAVIRL-- 160
Query: 335 GANDDYPAGAIVSGSRDKTVRVWDPQTAACVAVLSGHEYQVTALGLLPKADGQAGGLVSA 514
P+G +VSGS D ++++W +T+ + LSGH V L ++P G +SA
Sbjct: 161 ------PSGELVSGSSDASLKLWKGKTS--LQTLSGHTDTVRGLAVMPDL-----GFLSA 207
Query: 515 SLDKTVRVW 541
S D ++R+W
Sbjct: 208 SHDGSIRLW 216
>dbj|BAA92105.1| unnamed protein product [Homo sapiens]
Length = 544
Score = 90.1 bits (222), Expect = 2e-17
Identities = 49/141 (34%), Positives = 80/141 (55%), Gaps = 3/141 (2%)
Frame = +2
Query: 128 AMEFKLRGELRGHDEDVRGVVVC---PLGVLTGSRDKTVKVWAPDEATGSYSLVQTLVGH 298
A ++L LRGH+ DVRG+V C P ++ SRD+T ++WAPD S++ + + GH
Sbjct: 5 ATRYRLSCSLRGHELDVRGLVCCAYPPGAFVSVSRDRTTRLWAPDSPNRSFTEMHCMSGH 64
Query: 299 TDFVVAVLYVPPGANDDYPAGAIVSGSRDKTVRVWDPQTAACVAVLSGHEYQVTALGLLP 478
++FV V +P ++D YP G I +G D + ++ + + +L GH+ V +L
Sbjct: 65 SNFVSCVCIIP--SSDIYPHGLIATGGNDHNICIFSLDSPMPLYILKGHKNTVCSL---- 118
Query: 479 KADGQAGGLVSASLDKTVRVW 541
+ G+ G L+S S D T +VW
Sbjct: 119 -SSGKFGTLLSGSWDTTAKVW 138
Score = 47.4 bits (111), Expect = 1e-04
Identities = 38/136 (27%), Positives = 62/136 (44%), Gaps = 4/136 (2%)
Frame = +2
Query: 155 LRGHDEDVRGVVVCPLG--VLTGSRDKTVKVWAPDEATGSYSLVQTLVGHTDFV--VAVL 322
L+GH V V + P +LTGS DKTVK+W ++S GH D V +A+L
Sbjct: 147 LQGHTAAVWAVKILPEQGLMLTGSADKTVKLWKAGRCERTFS------GHEDCVRGLAIL 200
Query: 323 YVPPGANDDYPAGAIVSGSRDKTVRVWDPQTAACVAVLSGHEYQVTALGLLPKADGQAGG 502
+S + D ++R W T C+ V GH + ++ + P
Sbjct: 201 ----------SETEFLSCANDASIRRWQ-ITGECLEVYYGHTNYIYSISVFP----NCRD 245
Query: 503 LVSASLDKTVRVWRDG 550
V+ + D+++R+W+ G
Sbjct: 246 FVTTAEDRSLRIWKHG 261
>pir||T43447 hypothetical protein DKFZp434J1217.1 - human
gi|6599218|emb|CAB63739.1| hypothetical protein [Homo
sapiens] gi|21618443|gb|AAH32551.1| PLAA protein [Homo
sapiens]
Length = 795
Score = 90.1 bits (222), Expect = 2e-17
Identities = 49/141 (34%), Positives = 80/141 (55%), Gaps = 3/141 (2%)
Frame = +2
Query: 128 AMEFKLRGELRGHDEDVRGVVVC---PLGVLTGSRDKTVKVWAPDEATGSYSLVQTLVGH 298
A ++L LRGH+ DVRG+V C P ++ SRD+T ++WAPD S++ + + GH
Sbjct: 5 ATRYRLSCSLRGHELDVRGLVCCAYPPGAFVSVSRDRTTRLWAPDSPNRSFTEMHCMSGH 64
Query: 299 TDFVVAVLYVPPGANDDYPAGAIVSGSRDKTVRVWDPQTAACVAVLSGHEYQVTALGLLP 478
++FV V +P ++D YP G I +G D + ++ + + +L GH+ V +L
Sbjct: 65 SNFVSCVCIIP--SSDIYPHGLIATGGNDHNICIFSLDSPMPLYILKGHKNTVCSL---- 118
Query: 479 KADGQAGGLVSASLDKTVRVW 541
+ G+ G L+S S D T +VW
Sbjct: 119 -SSGKFGTLLSGSWDTTAKVW 138
Score = 47.4 bits (111), Expect = 1e-04
Identities = 38/136 (27%), Positives = 62/136 (44%), Gaps = 4/136 (2%)
Frame = +2
Query: 155 LRGHDEDVRGVVVCPLG--VLTGSRDKTVKVWAPDEATGSYSLVQTLVGHTDFV--VAVL 322
L+GH V V + P +LTGS DKTVK+W ++S GH D V +A+L
Sbjct: 147 LQGHTAAVWAVKILPEQGLMLTGSADKTVKLWKAGRCERTFS------GHEDCVRGLAIL 200
Query: 323 YVPPGANDDYPAGAIVSGSRDKTVRVWDPQTAACVAVLSGHEYQVTALGLLPKADGQAGG 502
+S + D ++R W T C+ V GH + ++ + P
Sbjct: 201 ----------SETEFLSCANDASIRRWQ-ITGECLEVYYGHTNYIYSISVFP----NCRD 245
Query: 503 LVSASLDKTVRVWRDG 550
V+ + D+++R+W+ G
Sbjct: 246 FVTTAEDRSLRIWKHG 261
>dbj|BAA91803.1| unnamed protein product [Homo sapiens]
Length = 795
Score = 90.1 bits (222), Expect = 2e-17
Identities = 49/141 (34%), Positives = 80/141 (55%), Gaps = 3/141 (2%)
Frame = +2
Query: 128 AMEFKLRGELRGHDEDVRGVVVC---PLGVLTGSRDKTVKVWAPDEATGSYSLVQTLVGH 298
A ++L LRGH+ DVRG+V C P ++ SRD+T ++WAPD S++ + + GH
Sbjct: 5 ATRYRLSCSLRGHELDVRGLVCCAYPPGAFVSVSRDRTTRLWAPDSPNRSFTEMHCMSGH 64
Query: 299 TDFVVAVLYVPPGANDDYPAGAIVSGSRDKTVRVWDPQTAACVAVLSGHEYQVTALGLLP 478
++FV V +P ++D YP G I +G D + ++ + + +L GH+ V +L
Sbjct: 65 SNFVSCVCIIP--SSDIYPHGLIATGGNDHNICIFSLDSPMPLYILKGHKNTVCSL---- 118
Query: 479 KADGQAGGLVSASLDKTVRVW 541
+ G+ G L+S S D T +VW
Sbjct: 119 -SSGKFGTLLSGSWDTTAKVW 138
Score = 44.7 bits (104), Expect = 8e-04
Identities = 37/136 (27%), Positives = 61/136 (44%), Gaps = 4/136 (2%)
Frame = +2
Query: 155 LRGHDEDVRGVVVCPLG--VLTGSRDKTVKVWAPDEATGSYSLVQTLVGHTDFV--VAVL 322
L+GH V V + P +LTGS KTVK+W ++S GH D V +A+L
Sbjct: 147 LQGHTAAVWAVKILPEQGLMLTGSAGKTVKLWKAGRCERTFS------GHEDCVRGLAIL 200
Query: 323 YVPPGANDDYPAGAIVSGSRDKTVRVWDPQTAACVAVLSGHEYQVTALGLLPKADGQAGG 502
+S + D ++R W T C+ V GH + ++ + P
Sbjct: 201 ----------SETEFLSCANDASIRRWQ-ITGECLEVYYGHTNYIYSISVFP----NCRD 245
Query: 503 LVSASLDKTVRVWRDG 550
V+ + D+++R+W+ G
Sbjct: 246 FVTTAEDRSLRIWKHG 261
