Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC002629A_C01 KCC002629A_c01
(552 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAC45212.1| putative eukaryotic translation initiation facto... 164 6e-40
ref|NP_191121.1| eukaryotic translation initiation factor 6 (EIF... 157 7e-38
sp|O81920|IF6_BETVU EUKARYOTIC TRANSLATION INITIATION FACTOR 6 (... 154 8e-37
pdb|1G62|A Chain A, Crystal Structure Of S.Cerevisiae Eif6 154 1e-36
ref|NP_015341.1| similar to human translation initiation factor ... 154 1e-36
>dbj|BAC45212.1| putative eukaryotic translation initiation factor 6 [Oryza sativa
(japonica cultivar-group)]
Length = 245
Score = 164 bits (416), Expect = 6e-40
Identities = 75/99 (75%), Positives = 92/99 (92%)
Frame = +1
Query: 256 MATRTQFENSNDVGVFAKLTNAYCICALGGAENFYSVFEAELSDHIPVIKTSVAGTRLVG 435
MATR QFEN+ +VGVF+KLTNAYC+ A+GG+ENFYS FE+EL+D IPV+KTS+ GTR++G
Sbjct: 1 MATRIQFENNCEVGVFSKLTNAYCLVAIGGSENFYSAFESELADVIPVVKTSIGGTRIIG 60
Query: 436 RLTVGNRNGLLLPNTTSDQELQHIRNCLPDEVVVQRIDE 552
RL VGN+NGLLLP+TT+DQELQH+RNCLPD+VVVQRIDE
Sbjct: 61 RLCVGNKNGLLLPHTTTDQELQHLRNCLPDQVVVQRIDE 99
>ref|NP_191121.1| eukaryotic translation initiation factor 6 (EIF-6) - like protein
[Arabidopsis thaliana] gi|11280199|pir||T47701
translation initiation factor eIF-6-like protein
[imported] - Arabidopsis thaliana
gi|7263550|emb|CAB81587.1| eukaryotic translation
initiation factor 6 (EIF-6)-like protein [Arabidopsis
thaliana] gi|22135944|gb|AAM91554.1| eukaryotic
translation initiation factor 6 (EIF-6)-like protein
[Arabidopsis thaliana] gi|32189303|gb|AAP75806.1|
At3g55620 [Arabidopsis thaliana]
Length = 245
Score = 157 bits (398), Expect = 7e-38
Identities = 71/99 (71%), Positives = 90/99 (90%)
Frame = +1
Query: 256 MATRTQFENSNDVGVFAKLTNAYCICALGGAENFYSVFEAELSDHIPVIKTSVAGTRLVG 435
MATR QFEN+ +VGVF+KLTNAYC+ A+GG+ENFYS FE+EL+D IP++KTS+ GTR++G
Sbjct: 1 MATRLQFENNCEVGVFSKLTNAYCLVAIGGSENFYSAFESELADVIPIVKTSIGGTRIIG 60
Query: 436 RLTVGNRNGLLLPNTTSDQELQHIRNCLPDEVVVQRIDE 552
RL GN+NGLL+P+TT+DQELQH+RN LPD+VVVQRIDE
Sbjct: 61 RLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIDE 99
>sp|O81920|IF6_BETVU EUKARYOTIC TRANSLATION INITIATION FACTOR 6 (EIF-6)
gi|7484648|pir||T14618 probable translation initiation
factor 6 - beet (fragment) gi|3355311|emb|CAA08809.1|
eukaryotic translation initiation factor 6 [Beta
vulgaris subsp. vulgaris]
Length = 193
Score = 154 bits (389), Expect = 8e-37
Identities = 70/99 (70%), Positives = 88/99 (88%)
Frame = +1
Query: 256 MATRTQFENSNDVGVFAKLTNAYCICALGGAENFYSVFEAELSDHIPVIKTSVAGTRLVG 435
MATR QFEN+ +VGVF+KLTNAYC+ A+GG+ENFYS FE EL+D+IPV+KTS+AGTR++G
Sbjct: 1 MATRLQFENNCEVGVFSKLTNAYCLVAIGGSENFYSTFETELADYIPVVKTSIAGTRIIG 60
Query: 436 RLTVGNRNGLLLPNTTSDQELQHIRNCLPDEVVVQRIDE 552
N+NGLL+P+TT+DQELQH+RNCLPD VVVQRI+E
Sbjct: 61 PNVCRNKNGLLVPHTTTDQELQHLRNCLPDSVVVQRIEE 99
>pdb|1G62|A Chain A, Crystal Structure Of S.Cerevisiae Eif6
Length = 224
Score = 154 bits (388), Expect = 1e-36
Identities = 67/99 (67%), Positives = 86/99 (86%)
Frame = +1
Query: 256 MATRTQFENSNDVGVFAKLTNAYCICALGGAENFYSVFEAELSDHIPVIKTSVAGTRLVG 435
MATRTQFENSN++GVF+KLTN YC+ A+GG+ENFYS FEAEL D IP++ T++AGTR++G
Sbjct: 1 MATRTQFENSNEIGVFSKLTNTYCLVAVGGSENFYSAFEAELGDAIPIVHTTIAGTRIIG 60
Query: 436 RLTVGNRNGLLLPNTTSDQELQHIRNCLPDEVVVQRIDE 552
R+T GNR GLL+P T+DQELQH+RN LPD V +QR++E
Sbjct: 61 RMTAGNRRGLLVPTQTTDQELQHLRNSLPDSVKIQRVEE 99
>ref|NP_015341.1| similar to human translation initiation factor 6 (eIF6); however,
TIF6 does not act as a true translation initiation
factor.The protein may be involved in the biogenesis and
or stability of the 60S ribosomal subunits; Tif6p
[Saccharomyces cerevisiae]
gi|3122261|sp|Q12522|IF6_YEAST Eukaryotic translation
initiation factor 6 (eIF-6) gi|1362412|pir||S57550
hypothetical protein YPR016c - yeast (Saccharomyces
cerevisiae) gi|887594|emb|CAA90161.1| unknown
[Saccharomyces cerevisiae] gi|939749|gb|AAA97594.1|
Lpz15p gi|1314090|emb|CAA95012.1| unknown [Saccharomyces
cerevisiae]
Length = 245
Score = 154 bits (388), Expect = 1e-36
Identities = 67/99 (67%), Positives = 86/99 (86%)
Frame = +1
Query: 256 MATRTQFENSNDVGVFAKLTNAYCICALGGAENFYSVFEAELSDHIPVIKTSVAGTRLVG 435
MATRTQFENSN++GVF+KLTN YC+ A+GG+ENFYS FEAEL D IP++ T++AGTR++G
Sbjct: 1 MATRTQFENSNEIGVFSKLTNTYCLVAVGGSENFYSAFEAELGDAIPIVHTTIAGTRIIG 60
Query: 436 RLTVGNRNGLLLPNTTSDQELQHIRNCLPDEVVVQRIDE 552
R+T GNR GLL+P T+DQELQH+RN LPD V +QR++E
Sbjct: 61 RMTAGNRRGLLVPTQTTDQELQHLRNSLPDSVKIQRVEE 99
