KCC002628A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC002628A_C01 KCC002628A_c01
taaaaatacatgcgcagggcaaagcagttaacaagcgtgcgacttgagagtgagagcgag
agagcgacgacagtccgcctATTTCGGCGACCGATTCATCCCCCACAGCGAAGCGGCACC
GATTCTTCAATTGCTAGCTCAATTAGCCGACGTGTACTACTTCACTCTGCCACGCTGCCA
CTCCTTTCTGCAGTCGCAAGCCAACCGGCGACCGCCTCAGTCCCGGCACCGTCAGCTCTG
ACCACTCCACTTGACACCGGCGCCCTTTTAGCCCCTAGCACTACCTTTATTTCTAGATCA
TCTACAAGCATGCCGATTGAGGGCATCGAGCTGGACGATGAGAAATTTGTCGACCTCCTC
GGCAAGCTCATAGGGGAGAGCAAGCACCTGCAAAACAACCCACCCGAATTTGTTCCCAAG
GAAGACCGAGCTGCCCGGCACGTGTTGGAGGTGCTTCAGCCTCTAAGCCAGGAAAATGGT
GGGCCGCTGCGCATCCGCCGCATCTCCTACGTGGAGGGCCGCGGCAACATAGTGGTGGAG
TATCCCGGCGAGCACGACGGCGGCATAATGAGCTTCGTGGGCTGCCACATGGACGTGGTG
ACTGCCAACCCAGACACGTGGACGTTCGACCCCTTCTCGCTGTCCATTGACGGGGACAAG
CTGCGCGGCCGCGGCACCACGGACTGCCTGGGTCACGTGGCCCTGGTGACTGAGTTCTTC
AGGCAGCTGGCCGAGCGGCGGCCCAAGCTGAAGCGCACCATCGTGGGGGTGTACATCG


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC002628A_C01 KCC002628A_c01
         (778 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

gb|AAK28643.1|AF360346_1 putative N-acetylornithine deacetylase ...   208  9e-53
dbj|BAA95409.1| DIP-1 [Citrullus lanatus]                             201  1e-50
gb|AAG25896.1|AF170086_1 silverleaf whitefly-induced protein 1; ...   195  6e-49
pir||B85200 hypothetical protein AT4g17830 [imported] - Arabidop...   171  1e-41
sp|P54638|ARGE_DICDI Acetylornithine deacetylase (Acetylornithin...   162  6e-39

>gb|AAK28643.1|AF360346_1 putative N-acetylornithine deacetylase [Arabidopsis thaliana]
           gi|17979097|gb|AAL47492.1| putative N-acetylornithine
           deacetylase [Arabidopsis thaliana]
          Length = 440

 Score =  208 bits (529), Expect = 9e-53
 Identities = 103/162 (63%), Positives = 123/162 (75%), Gaps = 2/162 (1%)
 Frame = +1

Query: 298 SSTSMPIEGI-ELDDEKFVDLLGKLIGESKHLQNNPPEFVPKEDRAARHVLEVLQPLSQE 474
           SS+   IE I  LD + +V LL KLIGESK +QNNPPE +P+ED   +HVL+ L+P S E
Sbjct: 3   SSSKALIESIGSLDKDSYVSLLSKLIGESKFVQNNPPELIPQEDLIVKHVLDSLRPYSTE 62

Query: 475 NGG-PLRIRRISYVEGRGNIVVEYPGEHDGGIMSFVGCHMDVVTANPDTWTFDPFSLSID 651
            GG PL I  ++Y  GRGN++VEYPG   G I+SFVG HMDVVTANPD W FDPFSLSID
Sbjct: 63  TGGGPLVINHVAYHSGRGNLIVEYPGSVPGKILSFVGMHMDVVTANPDDWEFDPFSLSID 122

Query: 652 GDKLRGRGTTDCLGHVALVTEFFRQLAERRPKLKRTIVGVYI 777
           GDKLRGRGTTDCLGHVALVTE  ++L + +P LK T+V V+I
Sbjct: 123 GDKLRGRGTTDCLGHVALVTELMKKLGQAKPALKSTVVAVFI 164

>dbj|BAA95409.1| DIP-1 [Citrullus lanatus]
          Length = 438

 Score =  201 bits (510), Expect = 1e-50
 Identities = 90/149 (60%), Positives = 121/149 (80%)
 Frame = +1

Query: 331 LDDEKFVDLLGKLIGESKHLQNNPPEFVPKEDRAARHVLEVLQPLSQENGGPLRIRRISY 510
           L  E ++ LL KLIGE++ +QNNPP+ +P+ED+  +HVL+VL P S +NGG L I++++Y
Sbjct: 14  LQKESYIPLLSKLIGEAEFVQNNPPDLIPEEDKIIKHVLDVLNPFSIDNGGSLVIKQVNY 73

Query: 511 VEGRGNIVVEYPGEHDGGIMSFVGCHMDVVTANPDTWTFDPFSLSIDGDKLRGRGTTDCL 690
           V GRGN+++EYPG   G ++SFVG HMDVV AN DTW FDPFSLSIDGDKLRGRGTTDCL
Sbjct: 74  VCGRGNLIIEYPGTVRGKVVSFVGSHMDVVPANRDTWEFDPFSLSIDGDKLRGRGTTDCL 133

Query: 691 GHVALVTEFFRQLAERRPKLKRTIVGVYI 777
           GHVAL+TE  +++A+ +PKLK ++V ++I
Sbjct: 134 GHVALLTELLKKIAQTKPKLKYSVVVIFI 162

>gb|AAG25896.1|AF170086_1 silverleaf whitefly-induced protein 1; M20B peptidase [Cucurbita
           pepo]
          Length = 439

 Score =  195 bits (496), Expect = 6e-49
 Identities = 88/150 (58%), Positives = 115/150 (76%)
 Frame = +1

Query: 328 ELDDEKFVDLLGKLIGESKHLQNNPPEFVPKEDRAARHVLEVLQPLSQENGGPLRIRRIS 507
           EL    ++ LL KLIGES+++QNNPP+ +PKED    HV EVL P S ENGGPL I+++S
Sbjct: 13  ELQKGSYISLLSKLIGESQYVQNNPPDLIPKEDLVGGHVREVLDPYSTENGGPLIIKQVS 72

Query: 508 YVEGRGNIVVEYPGEHDGGIMSFVGCHMDVVTANPDTWTFDPFSLSIDGDKLRGRGTTDC 687
           Y  GRG++++ YPG     ++SFVG HMDVV A+P  WTFDPFSLSI GD+LRGRGTTDC
Sbjct: 73  YTPGRGHLIIRYPGSDSAKVVSFVGSHMDVVPADPSAWTFDPFSLSISGDQLRGRGTTDC 132

Query: 688 LGHVALVTEFFRQLAERRPKLKRTIVGVYI 777
           LGHVAL+TE  ++LA+ + KLK ++V ++I
Sbjct: 133 LGHVALLTELLKKLAQTKLKLKNSVVVIFI 162

>pir||B85200 hypothetical protein AT4g17830 [imported] - Arabidopsis thaliana
           gi|5738376|emb|CAA17126.2| N-acetylornithine
           deacetylase-like protein, fragment [Arabidopsis
           thaliana] gi|7268535|emb|CAB78785.1| N-acetylornithine
           deacetylase-like protein, fragment [Arabidopsis
           thaliana]
          Length = 401

 Score =  171 bits (433), Expect = 1e-41
 Identities = 81/125 (64%), Positives = 97/125 (76%), Gaps = 1/125 (0%)
 Frame = +1

Query: 406 EFVPKEDRAARHVLEVLQPLSQENGG-PLRIRRISYVEGRGNIVVEYPGEHDGGIMSFVG 582
           E +P+ED   +HVL+ L+P S E GG PL I  ++Y  GRGN++VEYPG   G I+SFVG
Sbjct: 1   ELIPQEDLIVKHVLDSLRPYSTETGGGPLVINHVAYHSGRGNLIVEYPGSVPGKILSFVG 60

Query: 583 CHMDVVTANPDTWTFDPFSLSIDGDKLRGRGTTDCLGHVALVTEFFRQLAERRPKLKRTI 762
            HMDVVTANPD W FDPFSLSIDGDKLRGRGTTDCLGHVALVTE  ++L + +P LK T+
Sbjct: 61  MHMDVVTANPDDWEFDPFSLSIDGDKLRGRGTTDCLGHVALVTELMKKLGQAKPALKSTV 120

Query: 763 VGVYI 777
           V V+I
Sbjct: 121 VAVFI 125

>sp|P54638|ARGE_DICDI Acetylornithine deacetylase (Acetylornithinase) (AO)
           (N-acetylornithinase) (NAO) gi|763048|gb|AAB04942.1|
           P52D
          Length = 448

 Score =  162 bits (410), Expect = 6e-39
 Identities = 83/164 (50%), Positives = 111/164 (67%), Gaps = 9/164 (5%)
 Frame = +1

Query: 313 PIEGIELDDEKFVDLLGKLIGESKHLQNNPPEFVPKEDRAARHVLEVLQPLSQENGGPLR 492
           P+   ELD+++F+ LLGKLIGE+++LQN PP  +P ED A RHV+E L    + NGG L 
Sbjct: 4   PVASYELDEKRFLTLLGKLIGETENLQNRPPALIPIEDNAGRHVIEALTSYLKANGGVLA 63

Query: 493 IRRI-----SYVEGRGNIVVEYPGEHDGG----IMSFVGCHMDVVTANPDTWTFDPFSLS 645
           + ++     +Y + RGNI++EYPG   G      +SFVG H+DVV A+   W  +PF L 
Sbjct: 64  LEQVHCDPVNYPK-RGNIIIEYPGTSKGTSSPKTISFVGSHLDVVPADKTAWDRNPFQLI 122

Query: 646 IDGDKLRGRGTTDCLGHVALVTEFFRQLAERRPKLKRTIVGVYI 777
           I+GDKL GRGTTDCLGHVAL+T+ F QLA  +P LK +I  V+I
Sbjct: 123 IEGDKLYGRGTTDCLGHVALLTDLFIQLATEKPALKHSIFAVFI 166



EST assemble image


clone accession position
1 LCL041e10_r AV628424 1 413
2 LCL030e06_r AV627683 142 477
3 HCL071d10_r AV643544 293 778




Chlamydomonas reinhardtii
Kazusa DNA Research Institute