Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC002627A_C01 KCC002627A_c01
(447 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_788552.1| knirps-like CG4761-PA [Drosophila melanogaster]... 41 0.003
ref|NP_044109.1| MC158R [Molluscum contagiosum virus] gi|7515157... 32 0.044
dbj|BAB85218.1| matrix metalloproteinase [Volvox carteri f. naga... 37 0.061
dbj|BAA78762.1| Similar to Zea mays PRP gene.(X60432) [Oryza sat... 37 0.080
emb|CAD13232.1| polyprotein [Sugarcane mosaic virus] gi|17384392... 36 0.10
>ref|NP_788552.1| knirps-like CG4761-PA [Drosophila melanogaster]
gi|125519|sp|P13054|KNRL_DROME Knirps-related protein
gi|103406|pir||S06450 steroid hormone receptor homolog -
fruit fly (Drosophila melanogaster)
gi|8156|emb|CAA32365.1| unnamed protein product
[Drosophila melanogaster] gi|18447289|gb|AAL68221.1|
LD23140p [Drosophila melanogaster]
gi|23094177|gb|AAF51627.2| CG4761-PA [Drosophila
melanogaster] gi|226215|prf||1501350A knirps related
gene
Length = 647
Score = 41.2 bits (95), Expect = 0.003
Identities = 41/122 (33%), Positives = 52/122 (42%), Gaps = 8/122 (6%)
Frame = +3
Query: 27 GAAGAH----GGGGGGLWTKRPPPVTRTPSPRTPP*RRRWPSLPFQPSLPPALALT*SAL 194
GA G+H GGGGGG+ RPP + + SP P +P L P +PP L S L
Sbjct: 243 GADGSHSGGGGGGGGGVTPGRPPQMRKDLSPFLP---LPFPGLASMPVMPPPAFLPPSHL 299
Query: 195 L----TAAACRCCSPMLLSTPQQYDLCIWHKGHSYCPARL*SPGAHLRVHPTGTSPISRG 362
L A +L TP+Q + + S GA R P GTSP +
Sbjct: 300 LFPGYHPALYSHHQGLLKPTPEQQQAAVAAAAVQHL---FNSSGAGQRFAP-GTSPFANH 355
Query: 363 QQ 368
QQ
Sbjct: 356 QQ 357
>ref|NP_044109.1| MC158R [Molluscum contagiosum virus] gi|7515157|pir||T30760
hypothetical protein 158R - Molluscum contagiosum virus
1 gi|1492101|gb|AAC55286.1| MC158R [Molluscum
contagiosum virus subtype 1]
Length = 182
Score = 32.0 bits (71), Expect(2) = 0.044
Identities = 21/57 (36%), Positives = 28/57 (48%), Gaps = 3/57 (5%)
Frame = -3
Query: 202 AVSKALQVSANAGGKEGWKGKDG---HRRR*GGVRGLGVRVTGGGRLVHSPPPPPPC 41
A+ AL A AGG+ +GK+ HR+ G G RV+ G +PP PPC
Sbjct: 15 AILFALLALAGAGGRNSKEGKNDCYMHRQH-----GPGPRVSAGPCTSSNPPAAPPC 66
Score = 24.6 bits (52), Expect(2) = 0.044
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = -3
Query: 61 PPPPPPCAPAAPHA 20
PPPPPP P P A
Sbjct: 102 PPPPPPPPPPLPGA 115
>dbj|BAB85218.1| matrix metalloproteinase [Volvox carteri f. nagariensis]
Length = 625
Score = 37.0 bits (84), Expect = 0.061
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = +3
Query: 78 PPPVTRTPSPRTPP*RRRWPSLPFQPSLPP 167
PPP+++ PSPR PP R P P P PP
Sbjct: 541 PPPISKPPSPRPPPRPRSPPRSPLPPPRPP 570
>dbj|BAA78762.1| Similar to Zea mays PRP gene.(X60432) [Oryza sativa (japonica
cultivar-group)]
Length = 333
Score = 36.6 bits (83), Expect = 0.080
Identities = 24/58 (41%), Positives = 27/58 (46%), Gaps = 11/58 (18%)
Frame = +3
Query: 27 GAAGAHGGGGGGLWTK--------RPPPVTRTPS---PRTPP*RRRWPSLPFQPSLPP 167
G G GGGG K +PPP R PS P TPP R P+ P+ PS PP
Sbjct: 128 GKPPGSGSGGGGHHGKPPEHHHHHKPPPSPRCPSCHPPYTPPTPRPPPTPPYVPSPPP 185
>emb|CAD13232.1| polyprotein [Sugarcane mosaic virus] gi|17384392|emb|CAD13233.1|
polyprotein [Sugarcane mosaic virus]
Length = 362
Score = 36.2 bits (82), Expect = 0.10
Identities = 18/37 (48%), Positives = 20/37 (53%)
Frame = -2
Query: 161 QGRLEGQGWPSPALGWRAGTRGAGDRRGTFGPQPPTS 51
QG G G P+PA G +GTR GT G PPTS
Sbjct: 75 QGGSSGSGTPAPAAGGGSGTRTPSTGSGTQGSTPPTS 111