Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC002626A_C01 KCC002626A_c01
(514 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_073381.1| RS1 immediate-early gene transactivator, ICP4 l... 38 0.086
gb|AAG30103.1|AF282130_66 RSORF2 ICP4 regulatory protein [Meleag... 38 0.086
ref|ZP_00045362.1| COG2885: Outer membrane protein and related p... 37 0.15
gb|AAP22922.1| CheR3 [Rhodospirillum centenum] 35 0.43
gb|AAC64344.1| bestrophin [Homo sapiens] 35 0.56
>ref|NP_073381.1| RS1 immediate-early gene transactivator, ICP4 like protein [Meleagrid
herpesvirus 1] gi|12084920|ref|NP_073366.1| RS1
immediate-early gene transactivator, ICP4 like protein
[Meleagrid herpesvirus 1]
gi|12025192|gb|AAG45818.1|AF291866_85 RS1 immediate-early
gene transactivator, ICP4 like protein [Meleagrid
herpesvirus 1] gi|12025203|gb|AAG45829.1|AF291866_96 RS1
immediate-early gene transactivator, ICP4 like protein
[Meleagrid herpesvirus 1]
Length = 2164
Score = 37.7 bits (86), Expect = 0.086
Identities = 35/129 (27%), Positives = 49/129 (37%), Gaps = 21/129 (16%)
Frame = -2
Query: 507 PAAQMHTSGSSTHSLQSRNHGTQSWSSEQ**PPATT*RGMECRSGSLELYCS-------R 349
P+A TS SS+ S S + + + S P+ + SG+ + + R
Sbjct: 981 PSATSSTSSSSSSSSSSSSRSSSATRSSS---PSVSPSSRSSSSGTSDSSATSGSERRHR 1037
Query: 348 KGLLAKLSSTPHGEA--------------SLSTMPVAGPPCGADRPASRKPQVNRCLLSI 211
GL +S PHG A S S P GP C A RP S +P L+ +
Sbjct: 1038 SGLQDNRNSRPHGSARGRAARLCPSEKNLSPSGSPTPGPSCAATRPRSSEP-----LIEV 1092
Query: 210 EDSASYSAW 184
D S W
Sbjct: 1093 PDPPRGSCW 1101
>gb|AAG30103.1|AF282130_66 RSORF2 ICP4 regulatory protein [Meleagrid herpesvirus 1]
Length = 2161
Score = 37.7 bits (86), Expect = 0.086
Identities = 35/129 (27%), Positives = 49/129 (37%), Gaps = 21/129 (16%)
Frame = -2
Query: 507 PAAQMHTSGSSTHSLQSRNHGTQSWSSEQ**PPATT*RGMECRSGSLELYCS-------R 349
P+A TS SS+ S S + + + S P+ + SG+ + + R
Sbjct: 980 PSATSSTSSSSSSSSSSSSRSSSATRSSS---PSVSPSSRSSSSGTSDSSATSGSERRHR 1036
Query: 348 KGLLAKLSSTPHGEA--------------SLSTMPVAGPPCGADRPASRKPQVNRCLLSI 211
GL +S PHG A S S P GP C A RP S +P L+ +
Sbjct: 1037 SGLQDNRNSRPHGSARGRAARLCPSEKNLSPSGSPTPGPSCAATRPRSSEP-----LIEV 1091
Query: 210 EDSASYSAW 184
D S W
Sbjct: 1092 PDPPRGSCW 1100
>ref|ZP_00045362.1| COG2885: Outer membrane protein and related
peptidoglycan-associated (lipo)proteins [Magnetococcus
sp. MC-1]
Length = 544
Score = 37.0 bits (84), Expect = 0.15
Identities = 23/61 (37%), Positives = 33/61 (53%), Gaps = 2/61 (3%)
Frame = -2
Query: 342 LLAKLSSTPHGEAS--LSTMPVAGPPCGADRPASRKPQVNRCLLSIEDSASYSAWHLLLP 169
LL++ S+ P GE + L+ + +AG ++PA+ KPQ L S E S AW L P
Sbjct: 333 LLSQPSTAPAGEPAPTLANLGLAGAAALLEQPAAAKPQTAPRLTSPEQPLSAGAWQLARP 392
Query: 168 S 166
S
Sbjct: 393 S 393
>gb|AAP22922.1| CheR3 [Rhodospirillum centenum]
Length = 493
Score = 35.4 bits (80), Expect = 0.43
Identities = 27/63 (42%), Positives = 29/63 (45%)
Frame = -3
Query: 410 PPRREGAWNAARAP*SCTAPGKAY*QS*AARRMAKPPCPPCPSPVLHVGLTDRLRANLRS 231
PPRREGA A AP S TAP A PP P P+PV L +R RA L
Sbjct: 326 PPRREGAATALVAPPSVTAPAGA------------PPVPEPPAPV--PDLPERYRAILEL 371
Query: 230 TVA 222
A
Sbjct: 372 LAA 374
>gb|AAC64344.1| bestrophin [Homo sapiens]
Length = 435
Score = 35.0 bits (79), Expect = 0.56
Identities = 19/51 (37%), Positives = 27/51 (52%)
Frame = -1
Query: 427 RAMIAARHDVKGHGMPLGLPRAVLLQERPISKAKQHAAWRSLPVHHARRRS 275
RA++ RH +GHG L L + QER +S+ + AW PV A R +
Sbjct: 294 RALLGWRHGQRGHGQQL-LETRMQCQERKVSRVESSQAWWRTPVIPATREA 343
