Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC002624A_C01 KCC002624A_c01
(498 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|ZP_00093778.1| hypothetical protein [Novosphingobium aromati... 37 0.13
ref|ZP_00052161.1| COG3210: Large exoproteins involved in heme u... 36 0.30
pir||S55925 probable arabinogalactan protein precursor - tomato ... 35 0.39
ref|NP_073381.1| RS1 immediate-early gene transactivator, ICP4 l... 35 0.39
ref|NP_066018.1| nuclear receptor coactivator 5; coactivator ind... 35 0.51
>ref|ZP_00093778.1| hypothetical protein [Novosphingobium aromaticivorans]
Length = 357
Score = 37.0 bits (84), Expect = 0.13
Identities = 36/137 (26%), Positives = 53/137 (38%)
Frame = +3
Query: 75 ATADMACASPDSRAFLVGCLRSALEDADLVDAIAEQAFEAGLTAIAIGSGIISRDALKER 254
A + A PD+ L AL D+ D + + AIG+ + D R
Sbjct: 187 ALTALRAAYPDTPVRQSATLLKAL--VDVFDTMLDDPLPTTKLIAAIGA--VQPDTWISR 242
Query: 255 LFLTSEEAQSVLDICKQATMTTAEKPANGPVSLRMLGTSSGRVSLRLSIKERQQPAPATA 434
+ E ++ I A A P S R L T + V+ + + PAPA
Sbjct: 243 GIIHRESFPAMSHIAAIAATMVAAAKGQEPPSARPLPTKATPVAPVAAPRTAPTPAPAPK 302
Query: 435 PASPPPAQEPAVASQKL 485
PA+ PA P A++KL
Sbjct: 303 PATLAPAPRPRAATKKL 319
>ref|ZP_00052161.1| COG3210: Large exoproteins involved in heme utilization or adhesion
[Magnetospirillum magnetotacticum]
Length = 588
Score = 35.8 bits (81), Expect = 0.30
Identities = 35/117 (29%), Positives = 46/117 (38%), Gaps = 3/117 (2%)
Frame = +3
Query: 153 ADLVDAIAEQAFEAGLTAIAIGSGIISRDALKERLFLTSEEAQSVL---DICKQATMTTA 323
A +V A A AIA+ R K L T A L D A A
Sbjct: 180 ARIVQTGAANAIAGSDPAIAVQISADDRTDAKTTLVTTDGAAVPSLHFDDPALDAAADAA 239
Query: 324 EKPANGPVSLRMLGTSSGRVSLRLSIKERQQPAPATAPASPPPAQEPAVASQKLESA 494
K A L M G + + RL+ + PA T PAS P A +PA+ S + ++A
Sbjct: 240 AKAAAAIDVLNMFGLTGTQTVTRLTSVDLGVPAAGTLPASAPAAGDPALLSAEGKAA 296
>pir||S55925 probable arabinogalactan protein precursor - tomato
gi|872127|emb|CAA88023.1| putative
arabinogalactan-protein [Lycopersicon esculentum]
gi|1430842|emb|CAA67585.1| arabinogalactan [Lycopersicon
esculentum] gi|1430844|emb|CAA67584.1| arabinogalactan
[Lycopersicon esculentum]
Length = 215
Score = 35.4 bits (80), Expect = 0.39
Identities = 20/57 (35%), Positives = 26/57 (45%)
Frame = +3
Query: 294 ICKQATMTTAEKPANGPVSLRMLGTSSGRVSLRLSIKERQQPAPATAPASPPPAQEP 464
+C T + PA PV G +G + + + PAPATAPAS PP P
Sbjct: 12 LCIVVASVTGQTPAAAPV-----GAKAGTTPPAAAPTKPKTPAPATAPASAPPTAVP 63
>ref|NP_073381.1| RS1 immediate-early gene transactivator, ICP4 like protein [Meleagrid
herpesvirus 1] gi|12084920|ref|NP_073366.1| RS1
immediate-early gene transactivator, ICP4 like protein
[Meleagrid herpesvirus 1]
gi|12025192|gb|AAG45818.1|AF291866_85 RS1 immediate-early
gene transactivator, ICP4 like protein [Meleagrid
herpesvirus 1] gi|12025203|gb|AAG45829.1|AF291866_96 RS1
immediate-early gene transactivator, ICP4 like protein
[Meleagrid herpesvirus 1]
Length = 2164
Score = 35.4 bits (80), Expect = 0.39
Identities = 38/113 (33%), Positives = 51/113 (44%), Gaps = 5/113 (4%)
Frame = -3
Query: 388 RETRPEEVPSIRRLTGPLAGFSAVVIVACLQMSSTDWASSLVRKRRSLSASRLIMPLPIA 209
R TRP S A FS SS+ +SS RS SA+R P
Sbjct: 962 RRTRPPRTSSTSS-----ASFSRSPSATSSTSSSSSSSSS--SSSRSSSATRSSSP---- 1010
Query: 208 IAVRPASNACSAIASTRSASSSAERR-----QPTRNARESGLAQAMSAVARVC 65
+V P+S + S+ S SA+S +ERR Q RN+R G A+ + AR+C
Sbjct: 1011 -SVSPSSRSSSSGTSDSSATSGSERRHRSGLQDNRNSRPHGSARGRA--ARLC 1060
>ref|NP_066018.1| nuclear receptor coactivator 5; coactivator independent of AF-2
[Homo sapiens] gi|28380083|sp|Q9HCD5|NCO5_HUMAN Nuclear
receptor coactivator 5 (NCoA-5) (Coactivator independent
of AF-2) (CIA) gi|28194212|gb|AAO33457.1|AF470686_1
estrogen receptor coactivator [Homo sapiens]
Length = 579
Score = 35.0 bits (79), Expect = 0.51
Identities = 21/86 (24%), Positives = 42/86 (48%), Gaps = 3/86 (3%)
Frame = +3
Query: 243 LKERLFLTSEEAQSVLDIC---KQATMTTAEKPANGPVSLRMLGTSSGRVSLRLSIKERQ 413
L + +LT+EE +++ K+ M ++ GP+S + LG +SG SL+ +
Sbjct: 349 LADNRYLTAEETDKIINYLRERKERLMRSSTDSLPGPISRQPLGATSG-ASLKTQPSSQP 407
Query: 414 QPAPATAPASPPPAQEPAVASQKLES 491
+ P++ P P + Q+L++
Sbjct: 408 LQSGQVLPSATPTPSAPPTSQQELQA 433
