Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC002623A_C01 KCC002623A_c01
(661 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAD40134.1| OSJNBa0061C06.18 [Oryza sativa (japonica cultiva... 41 0.014
dbj|BAC84006.1| putative squamosa-promoter binding protein [Oryz... 40 0.040
gb|AAN28165.1| fibroin [Antheraea mylitta] 40 0.040
ref|ZP_00011793.1| COG3846: Type IV secretory pathway, TrbL comp... 40 0.040
sp|P25032|EMP1_WHEAT DNA-binding EMBP-1 protein gi|7489683|pir||... 39 0.069
>emb|CAD40134.1| OSJNBa0061C06.18 [Oryza sativa (japonica cultivar-group)]
Length = 251
Score = 41.2 bits (95), Expect = 0.014
Identities = 27/59 (45%), Positives = 30/59 (50%)
Frame = -1
Query: 643 SVPPLPLPPRPACAATLRLGRRARRDARRPVTATAAEPAPATLARGAWLDPAARRVPID 467
S P P PPRPA L GRR RR R P+ + A A ARG LD A RR P +
Sbjct: 58 SARPPPAPPRPAGFVLLCAGRRRRRGWRPPLGSAARRVA---AARGRELDTARRRRPAE 113
>dbj|BAC84006.1| putative squamosa-promoter binding protein [Oryza sativa (japonica
cultivar-group)]
Length = 216
Score = 39.7 bits (91), Expect = 0.040
Identities = 25/81 (30%), Positives = 37/81 (44%)
Frame = +3
Query: 393 APSNKGASLAAGCSQSGGALQTRVQSIGTRRAAGSSQAPLANVAGAGSAAVAVTGRRASR 572
A S + AA G AL + ++ R SS AP+A G GS++ A AS
Sbjct: 19 AASMAALAAAAAAGDGGAALPSPMEEDKKPRLVASSLAPVAGGGGGGSSSSAAVAAGASS 78
Query: 573 LARLPNLSVAAQAGRGGKGSG 635
+ +++ AA+ G G G G
Sbjct: 79 SSSSSSVAAAARRGAGRAGGG 99
>gb|AAN28165.1| fibroin [Antheraea mylitta]
Length = 507
Score = 39.7 bits (91), Expect = 0.040
Identities = 31/95 (32%), Positives = 45/95 (46%), Gaps = 7/95 (7%)
Frame = +3
Query: 375 QEMLARAPSNKGASLAAGCSQSGGALQTRVQSIGTRRAAGSSQAPLANVAGAGSAAVAVT 554
Q+ LA A + A+ A+G SGG+ + S G+ AA ++ A A AG+G+ V
Sbjct: 316 QQQLAAAAA---AASASGAGGSGGSYEWDYGSYGSDSAAAAAAAAAAAAAGSGAGGVGGG 372
Query: 555 GRRA-------SRLARLPNLSVAAQAGRGGKGSGG 638
R S A + AA +G GG+G GG
Sbjct: 373 YGRGDGGYGSDSAAAAAAAAAAAAGSGAGGRGDGG 407
Score = 32.7 bits (73), Expect = 4.9
Identities = 25/77 (32%), Positives = 34/77 (43%), Gaps = 1/77 (1%)
Frame = +3
Query: 411 ASLAAGCSQSGGALQTRVQSIGTRRAAGSSQAPLANVAGAGSAAVAVTGR-RASRLARLP 587
A+ AA S +GG S AA ++ A A +GAG G A+ A
Sbjct: 155 AAAAAAASGAGGRGHGGYGSDSAAAAAAAAAAAAAAASGAGGRGHGGYGSDSAAAAAAAA 214
Query: 588 NLSVAAQAGRGGKGSGG 638
+ AA +G GG+G GG
Sbjct: 215 AAAAAAGSGAGGRGDGG 231
>ref|ZP_00011793.1| COG3846: Type IV secretory pathway, TrbL components
[Rhodopseudomonas palustris]
Length = 432
Score = 39.7 bits (91), Expect = 0.040
Identities = 33/87 (37%), Positives = 44/87 (49%), Gaps = 5/87 (5%)
Frame = +3
Query: 408 GASLAA---GCSQSGGALQTRVQSIGTRRAAGSSQAPLANVAGAGSAAVAVTGRRASRLA 578
GA++AA G S +GGA + +G+ GS L+ VA AG++A A RRA+
Sbjct: 296 GAAMAAVRGGASVAGGA--STAYQLGSAAKGGSVAGGLSGVAQAGASAAASPLRRAAAEM 353
Query: 579 --RLPNLSVAAQAGRGGKGSGGTDEEP 653
R AA GGK +GGTD P
Sbjct: 354 GQRYQAGGRAAFEAMGGKVTGGTDASP 380
>sp|P25032|EMP1_WHEAT DNA-binding EMBP-1 protein gi|7489683|pir||T06487 probable
DNA-binding protein EmBP-1 - wheat
gi|170690|gb|AAA68428.1| DNA-binding protein
Length = 354
Score = 38.9 bits (89), Expect = 0.069
Identities = 26/79 (32%), Positives = 40/79 (49%), Gaps = 1/79 (1%)
Frame = +3
Query: 423 AGCSQSGGAL-QTRVQSIGTRRAAGSSQAPLANVAGAGSAAVAVTGRRASRLARLPNLSV 599
AG + GA+ GTR A S A + +AG SA+ A G+R + R+P+ +
Sbjct: 67 AGAAYGAGAVPHVPPPPAGTRHAHASMAAGVPYMAGE-SASAAGKGKRVGKTQRVPSGEI 125
Query: 600 AAQAGRGGKGSGGTDEEPD 656
+ +G G GS G+ E+ D
Sbjct: 126 NSSSGSGDAGSQGSSEKGD 144
