KCC002622A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC002622A_C01 KCC002622A_c01
ttgatacgttgctgaaattcaattgcacaagtAGCTGTCCCCGCGTTCACGCGTGTAGGA
AGCCCTTGCTTTCACGTTTTGACCAACGCGCGCGTTGCTGCACCCTTCGCCACACCTTCT
GAAGTATCAGTCGCTCGACAACATGCAGTCGCTTTCAAGGAAGCAGACATGCGTGCAGAC
GCAGCGGCGCAGTGTCGGAGCGGTCGGCCGCCGCGCGGTCGTCATTCGCGCGCAAGCCGC
GCCTTCCGCGCCCTCCTCGTCTGTTGAGTCCATCAGCGGCGTGCGCCAAGAGGTGGTGGA
CGCCATCGCCAAGGCCCGGCACAACTGCCTGACCGCCACCCACCTGCCGCTGCCCAACCG
CCGCCAGGGCAAGGTGCGCGACACGTACGACCTGGGCGACACGGTGGTGATCGTGACCAC
CGACCGCCAGTCCGCCTTCGACCGCCTGCTGGCGTCCGTGCCCTTCAAGGGCGCCGTGCT
CAAnCAGACCGCCGCCTGGTGGCTGGGCGCCACCGCCCACATCGCGCCC


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC002622A_C01 KCC002622A_c01
         (529 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

sp|Q07463|PUR7_VIGAC Phosphoribosylamidoimidazole-succinocarboxa...    95  6e-19
pir||S43323 5'-phosphoribosyl-4-(N-succinocarboxamide )-5-ami no...    94  1e-18
gb|AAC37399.1| 5'-phosphoribosyl-4-(N-succinocarboxamide)-5-ami ...    93  2e-18
gb|AAL48317.1| succinoaminoimidazolecarboximide ribonucleotide s...    93  2e-18
ref|NP_188748.1| phosphoribosyamidoimidazole-succinocarboxamide ...    90  2e-17

>sp|Q07463|PUR7_VIGAC Phosphoribosylamidoimidazole-succinocarboxamide synthase,
           chloroplast precursor (SAICAR synthetase)
           gi|629655|pir||S45524
           5'-phosphoribosyl-4-(N-succinocarboxamide
           )-5-aminoimidazole synthetase - moth bean
          Length = 341

 Score = 94.7 bits (234), Expect = 6e-19
 Identities = 58/113 (51%), Positives = 72/113 (63%), Gaps = 11/113 (9%)
 Frame = +2

Query: 224 IRAQAAPSA---PSSSVESI--SGVRQEVVDAIAK-ARHNCLTATHLP-----LPNRRQG 370
           IRA   PS     SS  +S+  S  R +VVD I K A  NCL+ T+L      L ++ +G
Sbjct: 29  IRASVMPSEGQQQSSLGDSLVNSPHRNDVVDVIRKSAISNCLSETNLHNTVPGLVSKTRG 88

Query: 371 KVRDTYDLGDTVVIVTTDRQSAFDRLLASVPFKGAVLXQTAAWWLGATAHIAP 529
           KVRD YD GD +V+VTTDRQSAFDR+LAS+PFKG VL +T+ WW   T  I P
Sbjct: 89  KVRDIYDAGDYLVLVTTDRQSAFDRILASIPFKGQVLNETSLWWFERTKQIVP 141

>pir||S43323 5'-phosphoribosyl-4-(N-succinocarboxamide )-5-ami noimidazole
           synthetase - moth bean
          Length = 341

 Score = 93.6 bits (231), Expect = 1e-18
 Identities = 60/119 (50%), Positives = 74/119 (61%), Gaps = 11/119 (9%)
 Frame = +2

Query: 206 GRRAVVIRAQAAPSA---PSSSVESI--SGVRQEVVDAIAK-ARHNCLTATHLP-----L 352
           G RA  IR    PS     SS  +S+  S  R +VVD I K A  NCL+ T+L      L
Sbjct: 25  GHRA--IRQSVMPSEGQQQSSLGDSLVNSPHRNDVVDVIRKSAISNCLSETNLHNTVPGL 82

Query: 353 PNRRQGKVRDTYDLGDTVVIVTTDRQSAFDRLLASVPFKGAVLXQTAAWWLGATAHIAP 529
            ++ +GKVRD YD GD +V+VTTDRQSAFDR+LAS+PFKG VL +T+ WW   T  I P
Sbjct: 83  VSKTRGKVRDIYDAGDYLVLVTTDRQSAFDRILASIPFKGQVLNETSLWWFERTKQIVP 141

>gb|AAC37399.1| 5'-phosphoribosyl-4-(N-succinocarboxamide)-5-ami noimidazole
           synthetase
          Length = 308

 Score = 93.2 bits (230), Expect = 2e-18
 Identities = 49/88 (55%), Positives = 61/88 (68%), Gaps = 6/88 (6%)
 Frame = +2

Query: 284 RQEVVDAIAK-ARHNCLTATHLP-----LPNRRQGKVRDTYDLGDTVVIVTTDRQSAFDR 445
           R +VVD I K A  NCL+ T+L      L ++ +GKVRD YD GD +V+VTTDRQSAFDR
Sbjct: 21  RNDVVDVIRKSAISNCLSETNLHNTVPGLVSKTRGKVRDIYDAGDYLVLVTTDRQSAFDR 80

Query: 446 LLASVPFKGAVLXQTAAWWLGATAHIAP 529
           +LAS+PFKG VL +T+ WW   T  I P
Sbjct: 81  ILASIPFKGQVLNETSLWWFERTKQIVP 108

>gb|AAL48317.1| succinoaminoimidazolecarboximide ribonucleotide synthetase [Vigna
           unguiculata]
          Length = 402

 Score = 92.8 bits (229), Expect = 2e-18
 Identities = 53/105 (50%), Positives = 67/105 (63%), Gaps = 6/105 (5%)
 Frame = +2

Query: 233 QAAPSAPSSSVESISGVRQEVVDAIAKAR-HNCLTATHLP-----LPNRRQGKVRDTYDL 394
           Q  PS   S V S    R +VVD I ++   NCL+ T+L      L ++ +GKVRD YD 
Sbjct: 56  QQQPSLGDSLVNSPH--RNDVVDVIRRSGLSNCLSETNLHNTVPGLVSKTRGKVRDIYDA 113

Query: 395 GDTVVIVTTDRQSAFDRLLASVPFKGAVLXQTAAWWLGATAHIAP 529
           GD +V+VTTDRQSAFDR+LAS+PFKG VL +T+ WW   T  I P
Sbjct: 114 GDYLVLVTTDRQSAFDRILASIPFKGQVLNETSLWWFERTKQIVP 158

>ref|NP_188748.1| phosphoribosyamidoimidazole-succinocarboxamide synthase -related
           [Arabidopsis thaliana] gi|26454658|sp|P38025|PUR7_ARATH
           Phosphoribosylamidoimidazole-succinocarboxamide
           synthase, chloroplast precursor (SAICAR synthetase)
           gi|11994271|dbj|BAB01454.1|
           5'-phosphoribosyl-4-(N-succinocarboxamide)-5-ami
           noimidazole synthetase [Arabidopsis thaliana]
           gi|27754219|gb|AAO22563.1| putative
           phosphoribosyamidoimidazole-succinocarboxamide synthase
           [Arabidopsis thaliana]
          Length = 411

 Score = 90.1 bits (222), Expect = 2e-17
 Identities = 48/100 (48%), Positives = 64/100 (64%), Gaps = 7/100 (7%)
 Frame = +2

Query: 251 PSSSVESI--SGVRQEVVDAIAKARHNCLTATHL-----PLPNRRQGKVRDTYDLGDTVV 409
           P  S++ +  S  + EV+  I  +  NCL+ T+L      L +R +GKVRD YD GD +V
Sbjct: 66  PQLSLDDLVTSNRKGEVLGTIKDSLSNCLSETNLLATVPGLKSRIKGKVRDIYDAGDYLV 125

Query: 410 IVTTDRQSAFDRLLASVPFKGAVLXQTAAWWLGATAHIAP 529
           ++TTDR SAFDR LAS+PFKG VL +T+ WW   T HI P
Sbjct: 126 LITTDRLSAFDRNLASIPFKGQVLNETSLWWFNNTQHITP 165



EST assemble image


clone accession position
1 HCL071b05_r AV643523 1 529
2 MXL017a05_r BP094015 30 326




Chlamydomonas reinhardtii
Kazusa DNA Research Institute