Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC002617A_C01 KCC002617A_c01
(417 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAM01039.1|AC091735_12 hypothetical protein [Oryza sativa] gi... 37 0.049
gb|AAH35761.1| Sec24-related protein D [Homo sapiens] 37 0.049
ref|NP_506673.1| putative protein (5P378) [Caenorhabditis elegan... 37 0.064
ref|XP_136700.2| similar to RNA and export factor binding protei... 37 0.064
ref|NP_741365.1| prion-like Q/N-rich domain protein PQN-75, Prio... 36 0.11
>gb|AAM01039.1|AC091735_12 hypothetical protein [Oryza sativa] gi|31430938|gb|AAP52783.1|
hypothetical protein [Oryza sativa (japonica
cultivar-group)]
Length = 113
Score = 37.4 bits (85), Expect = 0.049
Identities = 18/54 (33%), Positives = 24/54 (44%)
Frame = +1
Query: 190 GGYKPRQSTTQGWGGGGTRQTSTGGQPGPRASISGGPRGSFRQSKRQSNRSVNG 351
GG+ GW GG +T G P P A ++GGP SF ++ R G
Sbjct: 22 GGFGGGGGAWHGWNGGSGGRTGMTGGPHPSARVAGGPARSFWDMTEENARGGEG 75
>gb|AAH35761.1| Sec24-related protein D [Homo sapiens]
Length = 1033
Score = 37.4 bits (85), Expect = 0.049
Identities = 20/68 (29%), Positives = 31/68 (45%)
Frame = +1
Query: 163 PPKPSQSQVGGYKPRQSTTQGWGGGGTRQTSTGGQPGPRASISGGPRGSFRQSKRQSNRS 342
PP P Q+ GY P+Q+ G G + + GG PG A ++G P+ +
Sbjct: 209 PPLPGQTLGAGYPPQQAANSGPQMAGAQLSYPGGFPGGPAQMAGPPQPQKKLDPDSIPSP 268
Query: 343 VNGAENER 366
+ EN+R
Sbjct: 269 IQVIENDR 276
>ref|NP_506673.1| putative protein (5P378) [Caenorhabditis elegans]
gi|7504896|pir||T23076 hypothetical protein H12D21.6 -
Caenorhabditis elegans gi|3947582|emb|CAB07430.1|
Hypothetical protein H12D21.6 [Caenorhabditis elegans]
Length = 163
Score = 37.0 bits (84), Expect = 0.064
Identities = 26/74 (35%), Positives = 34/74 (45%), Gaps = 8/74 (10%)
Frame = +1
Query: 175 SQSQVGGYKPRQSTTQGWGGGGTRQTSTGGQPGPRASISGGPRGSFRQ--------SKRQ 330
S + GG+ ++S + G G RQ+ GGQ G +S S G GS Q S Q
Sbjct: 86 SSNSQGGFGNQESQSSGMGSNNQRQSGFGGQMG--SSGSSGSSGSSSQSGFGGQMGSSGQ 143
Query: 331 SNRSVNGAENERLQ 372
S S NG N +Q
Sbjct: 144 SGSSSNGMGNSNIQ 157
>ref|XP_136700.2| similar to RNA and export factor binding protein 1; Tcra
enhancer-binding factor interacting protein 1 [Mus
musculus]
Length = 267
Score = 37.0 bits (84), Expect = 0.064
Identities = 16/36 (44%), Positives = 23/36 (63%)
Frame = +1
Query: 166 PKPSQSQVGGYKPRQSTTQGWGGGGTRQTSTGGQPG 273
P+P+QS+ G PR + G+GGGGTR+ + G G
Sbjct: 166 PRPAQSRNRGGMPRNPGSGGYGGGGTRRETLGDSQG 201
>ref|NP_741365.1| prion-like Q/N-rich domain protein PQN-75, Prion-like Q/N-rich
domain protein (pqn-75) [Caenorhabditis elegans]
gi|14916375|gb|AAC48255.2|
Prion-like-(q/n-rich)-domain-bearing protein protein 75,
isoform a [Caenorhabditis elegans]
Length = 524
Score = 36.2 bits (82), Expect = 0.11
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Frame = +1
Query: 148 QKKALPPK--PSQSQVGGYKPRQSTTQGWGGGGTRQTSTGGQPGPRASISGGPRGSFRQS 321
QK+ P + P+ S G P +G G G + + S+ + GPR GGPRG R+S
Sbjct: 341 QKRQAPERSPPTGSPPTGSPPTGRPPRG-GPGKSSEESSESREGPRGGPRGGPRGGPRKS 399
Query: 322 KRQSNRS 342
+S+ S
Sbjct: 400 SEESSES 406
