Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC002615A_C01 KCC002615A_c01
(485 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAH35907.1| Similar to ubiquitin specific protease 27, X chro... 42 0.003
ref|XP_166577.2| similar to KIAA0877 protein [Homo sapiens] gi|3... 39 0.043
ref|NP_891431.1| putative membrane protein [Bordetella bronchise... 33 0.049
ref|ZP_00016151.1| COG0621: 2-methylthioadenine synthetase [Rhod... 38 0.056
gb|AAH58689.1| Unknown (protein for MGC:65672) [Mus musculus] 38 0.056
>gb|AAH35907.1| Similar to ubiquitin specific protease 27, X chromosome [Homo
sapiens]
Length = 308
Score = 42.4 bits (98), Expect = 0.003
Identities = 30/90 (33%), Positives = 38/90 (41%), Gaps = 5/90 (5%)
Frame = +3
Query: 231 PSDQAQRRTHTSCAWVRSGASGWKLPSPVLQLCSIQHQ*HCNPSDSGRCVGAAPAWPRRQ 410
P + + + W SG LPS L+ C+ S S C P PR Q
Sbjct: 60 PLQEREPAPEENLTWSSSGGDEKVLPSIPLR---------CHSSSSPVCPRRKPR-PRPQ 109
Query: 411 PQTQTRS-----ARPPPRLRTPAAPPPGPP 485
P+ ++RS A PPP R P PPP PP
Sbjct: 110 PRARSRSQPGLSAPPPPPARPPPPPPPPPP 139
>ref|XP_166577.2| similar to KIAA0877 protein [Homo sapiens]
gi|37538869|ref|XP_353574.1| similar to KIAA0877 protein
[Homo sapiens]
Length = 594
Score = 38.5 bits (88), Expect = 0.043
Identities = 42/125 (33%), Positives = 51/125 (40%), Gaps = 7/125 (5%)
Frame = -3
Query: 426 GSGSAAAAEATQAPRL----RSVPNRWDCSATGAGWSTAGAPAMGASNRRRHCEPRRMRC 259
GS +AA A L RS P+ C+ +G + GAP A +R C PR R
Sbjct: 11 GSDTAALVPVPLATPLLLEGRSEPSTRACAVSGGQAALPGAPVRPAPDRAARCAPRAKRV 70
Query: 258 ---AFAVALGRLAPASPALAPR*VAMMQPRRAASNRRPPEQLQAREFRPRAVGKFSQGTS 88
A A GR A A P P +Q RR+A P + AR AVGK T
Sbjct: 71 GANAGARGQGRGAAAGPERPPH----VQGRRSA----PRGAVGARRALLGAVGKAGGLTR 122
Query: 87 GAVTR 73
TR
Sbjct: 123 ARETR 127
>ref|NP_891431.1| putative membrane protein [Bordetella bronchiseptica]
gi|33577996|emb|CAE35261.1| putative membrane protein
[Bordetella bronchiseptica]
Length = 461
Score = 32.7 bits (73), Expect(2) = 0.049
Identities = 25/69 (36%), Positives = 30/69 (43%)
Frame = +1
Query: 229 RQATKRNGERTPHAPGFAVAPPVGSSHRRCSSCAPSSTSSTAIPAIRDAA*ARRLRGLGG 408
RQA R P A A P + + A S+T + A PA A A R LGG
Sbjct: 378 RQAAARQYAPRPAAAAAAAGP------HQAGTYAASATPAPARPAPSFPAHAYRQYALGG 431
Query: 409 SRRPRPAAR 435
+RRP P R
Sbjct: 432 ARRPPPRVR 440
Score = 24.6 bits (52), Expect(2) = 0.049
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = +3
Query: 435 RPPPRLRTPAAPPPGP 482
RPPPR+R P P P
Sbjct: 434 RPPPRVRRDDRPAPAP 449
>ref|ZP_00016151.1| COG0621: 2-methylthioadenine synthetase [Rhodospirillum rubrum]
Length = 540
Score = 38.1 bits (87), Expect = 0.056
Identities = 27/89 (30%), Positives = 38/89 (42%)
Frame = +3
Query: 210 PKRGSRAPSDQAQRRTHTSCAWVRSGASGWKLPSPVLQLCSIQHQ*HCNPSDSGRCVGAA 389
P+RG R PS + R S + R PSP S + C+P R
Sbjct: 394 PRRGRRRPSRSSCRAPSPSPSRSRFRRPPPSRPSPSRPFPSRLRRRRCHPPPRRRRPRPR 453
Query: 390 PAWPRRQPQTQTRSARPPPRLRTPAAPPP 476
P++PR P++ R +RP R R+ P P
Sbjct: 454 PSFPRACPRSSPRRSRPRRRRRSFPKPSP 482
>gb|AAH58689.1| Unknown (protein for MGC:65672) [Mus musculus]
Length = 503
Score = 38.1 bits (87), Expect = 0.056
Identities = 42/150 (28%), Positives = 60/150 (40%), Gaps = 5/150 (3%)
Frame = -3
Query: 459 ACGGVAEAARCGSGSAAAAEATQAPRLRSVPNRWDCSATGAGWSTAGAPAMGASNRRRHC 280
A G+ C S SA AA ++ + S + +D ++ G + + S RRR
Sbjct: 310 ASPGILSVEPCPSSSAVAAAQQESSQAASASSSFDSWSSFEGKPGKPSRSRSRSPRRRAH 369
Query: 279 EPRRMRCAFAVALGRLAPASPALAPR*VAMMQPRRAASNRRPPEQLQAREFRPRAVGKF- 103
P R R +V SP ++ R+ +R P E+ + R R R K
Sbjct: 370 SPERRREERSVPTAYRMSGSPGVS---------RKRTRSRSPHEKKKKRRSRSRTKAKAR 420
Query: 102 SQGTS---GAVTRPFSTDKHSLRIT-VERR 25
SQ TS A RP HS I+ VE R
Sbjct: 421 SQSTSPSKQAAQRPSPHSAHSASISPVESR 450
