KCC002614A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC002614A_C01 KCC002614A_c01
cgCGGTCACGAAGTCCAGAGCAAGTTGTGGAGAAGAAGAATGCCCCCTGGGCATCTGCGT
ATCGCCCGGGGGAGACAGTGCGAGCTGTCAATTAGTTCCTTGTTGCTGACTATATGCTGG
TCGCTGTTCCTCTCGCAAGGCTGTTCGGCGCTGCGGCTTCCCTCGCTGTCACTCCGGCAC
GCTGTGCGCCGTCCAAAGCCCACGCGACAAGAGGACGTGGAAGTATCAGCACGAGCCGCC
ACCCTCACTCCGGCCGCCAAGAAGCCGACCGACTTTGCGGACGGGGATGACGTGACGGTC
CGCAACCACTGGGCGCTGCTAGTGGCCGGCAGTGCGGGCTGGGGCAACTACCGGCACCAG
GCGGACGTGTGCCACGCCTACCAGGTGCTACTGCGGGGCGGCCTGCGGCCCGCGCATATT
GTGACCATGATGTACGATGACATCGCACATGACCCGGAGAACCCCTACCCGGGCCACGTG
TTCAACTCGCCAGGCGGCCCG


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC002614A_C01 KCC002614A_c01
         (501 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

emb|CAB64545.1| legumain-like protease [Zea mays]                     105  2e-22
emb|CAC18099.1| putative legumain [Zea mays]                          103  9e-22
emb|CAC18100.1| putative legumain [Zea mays]                          103  2e-21
gb|AAD04883.1| C13 endopeptidase NP1 precursor [Zea mays]             103  2e-21
emb|CAB64544.1| legumain-like protease [Zea mays]                     102  2e-21

>emb|CAB64545.1| legumain-like protease [Zea mays]
          Length = 481

 Score =  105 bits (263), Expect = 2e-22
 Identities = 48/85 (56%), Positives = 60/85 (70%)
 Frame = +1

Query: 244 LTPAAKKPTDFADGDDVTVRNHWALLVAGSAGWGNYRHQADVCHAYQVLLRGGLRPAHIV 423
           L P  + P+D A  DD  V   WA+L+AGS G+ NYRHQAD+CHAYQ++ +GGL+  +IV
Sbjct: 25  LEPTIRLPSDRAAADDA-VGTRWAVLIAGSNGYYNYRHQADICHAYQIMKKGGLKDENIV 83

Query: 424 TMMYDDIAHDPENPYPGHVFNSPGG 498
             MYDDIAH PENP PG + N P G
Sbjct: 84  VFMYDDIAHSPENPRPGVIINHPQG 108

>emb|CAC18099.1| putative legumain [Zea mays]
          Length = 486

 Score =  103 bits (258), Expect = 9e-22
 Identities = 47/89 (52%), Positives = 62/89 (68%), Gaps = 4/89 (4%)
 Frame = +1

Query: 244 LTPAAKKPTDFA----DGDDVTVRNHWALLVAGSAGWGNYRHQADVCHAYQVLLRGGLRP 411
           L PA + P+  A    + DD  V   WA+L+AGS+G+ NYRHQAD+CHAYQ++ +GGL+ 
Sbjct: 25  LEPAIRLPSQRAAAADETDDGDVGTRWAVLIAGSSGYYNYRHQADICHAYQIMKKGGLKD 84

Query: 412 AHIVTMMYDDIAHDPENPYPGHVFNSPGG 498
            +I+  MYDDIAH PENP PG + N P G
Sbjct: 85  ENIIVFMYDDIAHSPENPRPGVIINHPQG 113

>emb|CAC18100.1| putative legumain [Zea mays]
          Length = 485

 Score =  103 bits (256), Expect = 2e-21
 Identities = 47/88 (53%), Positives = 61/88 (68%), Gaps = 3/88 (3%)
 Frame = +1

Query: 244 LTPAAKKPTDFA---DGDDVTVRNHWALLVAGSAGWGNYRHQADVCHAYQVLLRGGLRPA 414
           L P  + P++ A   + DD  V   WA+L+AGS G+ NYRHQAD+CHAYQ++ +GGL+  
Sbjct: 25  LEPTIRLPSERAAADETDDDAVGTRWAVLIAGSNGYYNYRHQADICHAYQIMKKGGLKDE 84

Query: 415 HIVTMMYDDIAHDPENPYPGHVFNSPGG 498
           +IV  MYDDIAH PENP PG + N P G
Sbjct: 85  NIVVFMYDDIAHSPENPRPGVIINHPQG 112

>gb|AAD04883.1| C13 endopeptidase NP1 precursor [Zea mays]
          Length = 485

 Score =  103 bits (256), Expect = 2e-21
 Identities = 47/88 (53%), Positives = 61/88 (68%), Gaps = 3/88 (3%)
 Frame = +1

Query: 244 LTPAAKKPTDFA---DGDDVTVRNHWALLVAGSAGWGNYRHQADVCHAYQVLLRGGLRPA 414
           L P  + P++ A   + DD  V   WA+L+AGS G+ NYRHQAD+CHAYQ++ +GGL+  
Sbjct: 25  LEPTIRLPSERAAADETDDDAVGTRWAVLIAGSNGYYNYRHQADICHAYQIMKKGGLKDE 84

Query: 415 HIVTMMYDDIAHDPENPYPGHVFNSPGG 498
           +IV  MYDDIAH PENP PG + N P G
Sbjct: 85  NIVVFMYDDIAHSPENPRPGVIINHPQG 112

>emb|CAB64544.1| legumain-like protease [Zea mays]
          Length = 486

 Score =  102 bits (255), Expect = 2e-21
 Identities = 58/134 (43%), Positives = 75/134 (55%)
 Frame = +1

Query: 97  SLLLTICWSLFLSQGCSALRLPSLSLRHAVRRPKPTRQEDVEVSARAATLTPAAKKPTDF 276
           +LLL++C        CSA   P L    A+R P          S RAA            
Sbjct: 9   ALLLSVCL-------CSAWARPRLET--AIRLP----------SQRAAAAD--------- 40

Query: 277 ADGDDVTVRNHWALLVAGSAGWGNYRHQADVCHAYQVLLRGGLRPAHIVTMMYDDIAHDP 456
            + DD  V   WA+L+AGS+G+ NYRHQAD+CHAYQ++ +GGL+  +I+  MYDDIAH P
Sbjct: 41  -ETDDGAVGTRWAVLIAGSSGYYNYRHQADICHAYQIMKKGGLKDENIIVFMYDDIAHSP 99

Query: 457 ENPYPGHVFNSPGG 498
           ENP PG + N P G
Sbjct: 100 ENPRPGVIINHPQG 113



EST assemble image


clone accession position
1 LCL093a09_r AV631387 1 441
2 HCL070a05_r AV643457 3 501




Chlamydomonas reinhardtii
Kazusa DNA Research Institute