KCC002613A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC002613A_C01 KCC002613A_c01
tctacagtatcggcaaaccaaaccagcgcctcggcctggtgccacggaggcataacggca
tgcatttcgggatgggctcgCAGGACCTATTTGTCTGCTGGAGGGCCGCCCTACAGCCAG
ACTGCACAGGCTCTCCATAAGGGAGCCAAACATAATAGATCTAAGCACAGCCTGGCCGCT
GCACGAGATTCGCTTGGTCAGGCCAGAACCCTAAGGCGAAGCCAAAGTCTTGCAGCGCCC
GTTTTTTCGTCCGCGAGGCGTTCTCAAAGATGGCTCTTAGATTGCTAGGTGCAGCTGTGG
TGCTGGCGGCCTTCGCCAGCGCCGGGGGCCCTCCAGGACCGCCTTCTGCGCGCGCAGCAC
ACGCAAATGCTGCTGGAGGCCCAGGCAAACCCTCTGGGCGCCTTCAAGGAGTGGGCCCAG
ACGCATTCCCGGTCCTACGGTTAACGACGTCGCGGAGTTTGAGAACCGCTTCAAGGTCTG
GCTCGAGAACCTTGAGTACGTTCTCGCCTACAACGCGCGCACCACGTCGCACTGGCTCAC
GCTCAACCACCTGGCCGACCTGTCGACGCCCGAGTACAAGTCGAAGCTGCTGGGCTTCGA
TAACCAGGCTCGCGTTGCTCGCAACAAGTTGAAGACCGGCTTCAGGTACGAGGACGTGGA
TGCCGAGGCGCTGCCCCCCGCCATCGATTGGCGCAAGAAGAACGCCGTTGCCGAGGTCAA
GAACCAGGGCCAGTGCGGCTCCTGCTGGGCCTTCGCCACCACCGGTAGCGTGGAGGGCAT
CAACGCCATCGTGACTGGCAGCCTGGTGTCACTGTCGGAGCAGGAGCTGGTGGACTGCGA
CACGGAGCAGGATAAGGGCTGCAGCGGCGGCCTGATGGACTACGCCTACGCCTGGATCAT
CAAGAACAAGGGCATCAACACGGAGGAGGACTACCCCTACACCGCCATGGACGGCCAGTG
CGACGTCGCCAAGATGAAGCGCCGCGTGGTC


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC002613A_C01 KCC002613A_c01
         (991 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

gb|AAL60580.1|AF454958_1 senescence-associated cysteine protease...   204  2e-51
ref|NP_568620.1| cysteine proteinase RD21A [Arabidopsis thaliana...   201  1e-50
gb|AAL60579.1|AF454957_1 senescence-associated cysteine protease...   201  2e-50
gb|AAK62661.1| F2G19.31/F2G19.31 [Arabidopsis thaliana] gi|19548...   201  2e-50
ref|NP_564497.1| cysteine proteinase RD21A [Arabidopsis thaliana...   201  2e-50

>gb|AAL60580.1|AF454958_1 senescence-associated cysteine protease [Brassica oleracea]
          Length = 485

 Score =  204 bits (518), Expect = 2e-51
 Identities = 96/187 (51%), Positives = 132/187 (70%)
 Frame = +2

Query: 431 GPTVNDVAEFENRFKVWLENLEYVLAYNARTTSHWLTLNHLADLSTPEYKSKLLGFDNQA 610
           G   N + E + RF+++ +NL ++  +N +  S+ L L   ADL+  EY+S  LG    +
Sbjct: 56  GKAQNSLTEKDRRFEIFKDNLRFIDEHNGKNLSYRLGLTKFADLTNDEYRSMYLG----S 111

Query: 611 RVARNKLKTGFRYEDVDAEALPPAIDWRKKNAVAEVKNQGQCGSCWAFATTGSVEGINAI 790
           R+ R   K+  RYE    +A+P ++DWRK+ AVAEVK+QG CGSCWAF+T G+VEGIN I
Sbjct: 112 RLKRKATKSSLRYEVRVGDAIPESVDWRKEGAVAEVKDQGSCGSCWAFSTIGAVEGINKI 171

Query: 791 VTGSLVSLSEQELVDCDTEQDKGCSGGLMDYAYAWIIKNKGINTEEDYPYTAMDGQCDVA 970
           VTG L++LSEQELVDCDT  ++GC+GGLMDYA+ +II N GI+TEEDYPY  +DG+CD  
Sbjct: 172 VTGDLITLSEQELVDCDTSYNEGCNGGLMDYAFEFIINNGGIDTEEDYPYKGVDGRCDQT 231

Query: 971 KMKRRVV 991
           +   +VV
Sbjct: 232 RKNAKVV 238

>ref|NP_568620.1| cysteine proteinase RD21A [Arabidopsis thaliana]
           gi|9757832|dbj|BAB08269.1| cysteine protease component
           of protease-inhibitor complex [Arabidopsis thaliana]
           gi|17065064|gb|AAL32686.1| cysteine protease component
           of protease-inhibitor complex [Arabidopsis thaliana]
           gi|21387153|gb|AAM47980.1| cysteine protease component
           of protease-inhibitor complex [Arabidopsis thaliana]
          Length = 463

 Score =  201 bits (512), Expect = 1e-50
 Identities = 97/180 (53%), Positives = 130/180 (71%)
 Frame = +2

Query: 452 AEFENRFKVWLENLEYVLAYNARTTSHWLTLNHLADLSTPEYKSKLLGFDNQARVARNKL 631
           AE + RF+++ +NL ++  +N +  S+ L L   ADL+  EY+S  LG    A+  +  L
Sbjct: 69  AEKDQRFEIFKDNLRFIDEHNTKNLSYKLGLTRFADLTNEEYRSMYLG----AKPTKRVL 124

Query: 632 KTGFRYEDVDAEALPPAIDWRKKNAVAEVKNQGQCGSCWAFATTGSVEGINAIVTGSLVS 811
           KT  RY+    +ALP ++DWRK+ AVA+VK+QG CGSCWAF+T G+VEGIN IVTG L+S
Sbjct: 125 KTSDRYQARVGDALPDSVDWRKEGAVADVKDQGSCGSCWAFSTIGAVEGINKIVTGDLIS 184

Query: 812 LSEQELVDCDTEQDKGCSGGLMDYAYAWIIKNKGINTEEDYPYTAMDGQCDVAKMKRRVV 991
           LSEQELVDCDT  ++GC+GGLMDYA+ +IIKN GI+TE DYPY A DG+CD  +   +VV
Sbjct: 185 LSEQELVDCDTSYNQGCNGGLMDYAFEFIIKNGGIDTEADYPYKAADGRCDQNRKNAKVV 244

>gb|AAL60579.1|AF454957_1 senescence-associated cysteine protease [Brassica oleracea]
          Length = 460

 Score =  201 bits (511), Expect = 2e-50
 Identities = 97/179 (54%), Positives = 130/179 (72%)
 Frame = +2

Query: 455 EFENRFKVWLENLEYVLAYNARTTSHWLTLNHLADLSTPEYKSKLLGFDNQARVARNKLK 634
           E + RF+++ +NL ++  +N +  S+ L L   ADL+  EY+S  LG  ++ RV    LK
Sbjct: 69  EKDQRFEIFKDNLRFIDEHNNKNLSYKLGLTRFADLTNEEYRSIYLGAKSKKRV----LK 124

Query: 635 TGFRYEDVDAEALPPAIDWRKKNAVAEVKNQGQCGSCWAFATTGSVEGINAIVTGSLVSL 814
           T  RY+    +A+P ++DWRK+ AVA VK+QG CGSCWAF+T G+VEGIN IVTG L+SL
Sbjct: 125 TSDRYQPRVGDAIPDSVDWRKEGAVAAVKDQGSCGSCWAFSTIGAVEGINKIVTGDLISL 184

Query: 815 SEQELVDCDTEQDKGCSGGLMDYAYAWIIKNKGINTEEDYPYTAMDGQCDVAKMKRRVV 991
           SEQELVDCDT  ++GC+GGLMDYA+ +IIKN GI+TEEDYPY A DG+CD  +   +VV
Sbjct: 185 SEQELVDCDTSYNQGCNGGLMDYAFEFIIKNGGIDTEEDYPYKAADGRCDQTRKNAKVV 243

>gb|AAK62661.1| F2G19.31/F2G19.31 [Arabidopsis thaliana] gi|19548039|gb|AAL87383.1|
           F2G19.31/F2G19.31 [Arabidopsis thaliana]
          Length = 462

 Score =  201 bits (510), Expect = 2e-50
 Identities = 97/183 (53%), Positives = 130/183 (71%)
 Frame = +2

Query: 443 NDVAEFENRFKVWLENLEYVLAYNARTTSHWLTLNHLADLSTPEYKSKLLGFDNQARVAR 622
           N + E + RF+++ +NL +V  +N +  S+ L L   ADL+  EY+SK LG   + +  R
Sbjct: 64  NSLVEKDRRFEIFKDNLRFVDEHNEKNLSYRLGLTRFADLTNDEYRSKYLGAKMEKKGER 123

Query: 623 NKLKTGFRYEDVDAEALPPAIDWRKKNAVAEVKNQGQCGSCWAFATTGSVEGINAIVTGS 802
              +T  RYE    + LP +IDWRKK AVAEVK+QG CGSCWAF+T G+VEGIN IVTG 
Sbjct: 124 ---RTSLRYEARVGDELPESIDWRKKGAVAEVKDQGGCGSCWAFSTIGAVEGINQIVTGD 180

Query: 803 LVSLSEQELVDCDTEQDKGCSGGLMDYAYAWIIKNKGINTEEDYPYTAMDGQCDVAKMKR 982
           L++LSEQELVDCDT  ++GC+GGLMDYA+ +IIKN GI+T++DYPY  +DG CD  +   
Sbjct: 181 LITLSEQELVDCDTSYNEGCNGGLMDYAFEFIIKNGGIDTDKDYPYKGVDGTCDQIRKNA 240

Query: 983 RVV 991
           +VV
Sbjct: 241 KVV 243

>ref|NP_564497.1| cysteine proteinase RD21A [Arabidopsis thaliana]
           gi|1172873|sp|P43297|RD21_ARATH Cysteine proteinase
           RD21a precursor (RD21) gi|541857|pir||JN0719
           drought-inducible cysteine proteinase (EC 3.4.22.-)
           RD21A precursor - Arabidopsis thaliana
           gi|435619|dbj|BAA02374.1| thiol protease [Arabidopsis
           thaliana] gi|12321010|gb|AAG50628.1|AC083835_13 cysteine
           protease, putative [Arabidopsis thaliana]
           gi|18175926|gb|AAL59952.1| putative cysteine proteinase
           RD21A [Arabidopsis thaliana] gi|22136972|gb|AAM91715.1|
           putative cysteine proteinase RD21A [Arabidopsis
           thaliana]
          Length = 462

 Score =  201 bits (510), Expect = 2e-50
 Identities = 97/183 (53%), Positives = 130/183 (71%)
 Frame = +2

Query: 443 NDVAEFENRFKVWLENLEYVLAYNARTTSHWLTLNHLADLSTPEYKSKLLGFDNQARVAR 622
           N + E + RF+++ +NL +V  +N +  S+ L L   ADL+  EY+SK LG   + +  R
Sbjct: 64  NSLVEKDRRFEIFKDNLRFVDEHNEKNLSYRLGLTRFADLTNDEYRSKYLGAKMEKKGER 123

Query: 623 NKLKTGFRYEDVDAEALPPAIDWRKKNAVAEVKNQGQCGSCWAFATTGSVEGINAIVTGS 802
              +T  RYE    + LP +IDWRKK AVAEVK+QG CGSCWAF+T G+VEGIN IVTG 
Sbjct: 124 ---RTSLRYEARVGDELPESIDWRKKGAVAEVKDQGGCGSCWAFSTIGAVEGINQIVTGD 180

Query: 803 LVSLSEQELVDCDTEQDKGCSGGLMDYAYAWIIKNKGINTEEDYPYTAMDGQCDVAKMKR 982
           L++LSEQELVDCDT  ++GC+GGLMDYA+ +IIKN GI+T++DYPY  +DG CD  +   
Sbjct: 181 LITLSEQELVDCDTSYNEGCNGGLMDYAFEFIIKNGGIDTDKDYPYKGVDGTCDQIRKNA 240

Query: 983 RVV 991
           +VV
Sbjct: 241 KVV 243



EST assemble image


clone accession position
1 LCL002f06_r AV626118 1 329
2 HCL069g08_r AV643443 142 588
3 MXL073b06_r BP097291 390 838
4 LC025b01_r AV620657 461 970
5 LCL030b09_r AV627661 637 992




Chlamydomonas reinhardtii
Kazusa DNA Research Institute