KCC002610A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC002610A_C01 KCC002610A_c01
atcttcttcatgtttggcctgctgttctcgttctgcatcattggcgcggtgtacttctcc
atctggacggagaagaagtcGCCCAACCACTGGTACGTGGGCTCAGCCAACGCCACGGGC
CAGTACGCGCAGTACGCCCCCGGCAACCCGGCTTTCGTGGGCTTCGCCTCCTTCATCACC
TCGTTCATCCTGTACGGCTACCTCATCCCGATTTCGCTGTACGTGTCGATGGAGCTGGTG
AAGATTGCGCAGTCCATGGGCTATATCAACCTGGACCGTGACATGTACCACGCGGAGACG
GACACGCCCGCGCTGGCGCGCACGTCCAACCTGAACGAGGAGCTGGGCATGGTGAACACA
ATCTTGTCGGATAAGACCGGCACGCTGACACGCAACGTGATGGAGTTTTTCAAGTGCTCC
ATTGCGGGCGTGCCGTACGGGGCGGGCATTACGGAGATCGAAAAGGCGAATGCGCTCAGG
AAGGGCCAGGTTCTGGACGACCGCGAGCGGCCCGACGCGGCCAAGTTCCGCGAGCGCTTC
TTCAACTTCTACGACGACCGCCTGATGGGCGAGGCGTGGTACAGCGCCAAGGACCCCGTC
ACCATCGAGATGTTTTTCCGCCTGCTGGCCGTGTGCCACACCGTCATCCCCGACGGCCCC
ACAGATGAGAAGAGCATTAAGTACGAGGCCGAGTCCCCCGACGAGGCTGCGCTGGTGGTG
GCTGCCAAGGCGTTTGGCTTCTTCTTCTTCAAGCGCACCAACACCACCATCACGGTGCGC
GAGCGCACGCCGCGCGGCACCGCGGACGTGGAGTATGAGGTGCTGAACATCCTGGAGTTC
AACTCCACCCGCAAGCGCATGAGCGTAGTGGTCAAGGAGAAGGCCAATGACAAGATCATC
ATCTTCTGCAAGGGTGCGGACACGGTCATCTACGAGCGCCTGGACCCCAACTACGCGCCT
AACGAGGAGATGAAGACCACAACCTCACGGGACATGGAGAACTTTGGTGCCGCAGGCCTG
CGCACGCTGTGCCTGTCGTACGCCGAGGTGGACCGCGACTGGTACACCAATGTGTGGATG
CCGGAGTGGGTCAACGCCAAGACGTCGCTGGAGGACCGCGAAAACAAGGTGGGCGAGGTC
AGCGAGAAGATCGAGCGCAAGCTGCGGCTGCTGGGCTGCACGGGCATCGAGGACAAGCTG
CAGGAGGGCGTGCCGGACTGCATCCGGA


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC002610A_C01 KCC002610A_c01
         (1228 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|NP_176191.1| haloacid dehalogenase-like hydrolase family [Ar...   382  e-105
pir||C96622 probable ATPase F23H11.14 [imported] - Arabidopsis t...   382  e-105
sp|Q9LK90|ALA8_ARATH Potential phospholipid-transporting ATPase ...   348  1e-94
ref|NP_177038.1| haloacid dehalogenase-like hydrolase family [Ar...   346  4e-94
ref|NP_189425.1| haloacid dehalogenase-like hydrolase family [Ar...   346  5e-94

>ref|NP_176191.1| haloacid dehalogenase-like hydrolase family [Arabidopsis thaliana]
            gi|30316321|sp|Q9XIE6|ALA3_ARATH Potential
            phospholipid-transporting ATPase 3 (Aminophospholipid
            flippase 3) gi|20147219|gb|AAM10325.1|
            At1g59820/F23H11_14 [Arabidopsis thaliana]
          Length = 1213

 Score =  382 bits (980), Expect = e-105
 Identities = 207/411 (50%), Positives = 278/411 (67%), Gaps = 3/411 (0%)
 Frame = +1

Query: 1    IFFMFGLLFSFCIIGAVYFSIWTEKKSPNHWYVGSANATGQYAQYAPGNPAFVGFASFIT 180
            I  +F +L + C+IGA+  SI T+++     Y+G  N+  +Y      N   +GF +F T
Sbjct: 298  IITIFCVLVTMCLIGAIGCSIVTDREDK---YLGLHNSDWEYR-----NGLMIGFFTFFT 349

Query: 181  SFILYGYLIPISLYVSMELVKIAQSMGYINLDRDMYHAETDTPALARTSNLNEELGMVNT 360
               L+  +IPISLYVS+E++K  QS  +IN D +MYHAET+TPA ARTSNLNEELG V  
Sbjct: 350  LVTLFSSIIPISLYVSIEMIKFIQSTQFINRDLNMYHAETNTPASARTSNLNEELGQVEY 409

Query: 361  ILSDKTGTLTRNVMEFFKCSIAGVPYGAGITEIEKANALRKGQVLDDRERPDAAKFRERF 540
            I SDKTGTLTRN+MEFFKCSI GV YG G+TEIEK  A R G  + + +R   A  RE+ 
Sbjct: 410  IFSDKTGTLTRNLMEFFKCSIGGVSYGCGVTEIEKGIAQRHGLKVQEEQRSTGA-IREKG 468

Query: 541  FNFYDDRLMGEAWYSAKDPVTIEMFFRLLAVCHTVIPDGPTDEKSIKYEAESPDEAALVV 720
            FNF D RLM  AW +  +P   +  FR LA+CHTV+P+G    + I Y+A SPDEAALV 
Sbjct: 469  FNFDDPRLMRGAWRNEPNPDLCKELFRCLAICHTVLPEGDESPEKIVYQAASPDEAALVT 528

Query: 721  AAKAFGFFFFKRTNTTITVRERTPRGTA---DVEYEVLNILEFNSTRKRMSVVVKEKAND 891
            AAK FGFFF++RT T + VRE          DV YE+LN+LEFNSTRKR SVV +   + 
Sbjct: 529  AAKNFGFFFYRRTPTMVYVRESHVEKMGKIQDVAYEILNVLEFNSTRKRQSVVCR-FPDG 587

Query: 892  KIIIFCKGADTVIYERLDPNYAPNEEMKTTTSRDMENFGAAGLRTLCLSYAEVDRDWYTN 1071
            +++++CKGAD VI+ERL       ++++  T   +E+FG++GLRTLCL+Y +++ + Y +
Sbjct: 588  RLVLYCKGADNVIFERLANGM---DDVRKVTREHLEHFGSSGLRTLCLAYKDLNPETYDS 644

Query: 1072 VWMPEWVNAKTSLEDRENKVGEVSEKIERKLRLLGCTGIEDKLQEGVPDCI 1224
             W  +++ AK++L DRE K+ EV+E IE+ L L+G T IEDKLQEGVP CI
Sbjct: 645  -WNEKFIQAKSALRDREKKLDEVAELIEKDLILIGSTAIEDKLQEGVPTCI 694

>pir||C96622 probable ATPase F23H11.14 [imported] - Arabidopsis thaliana
            gi|5080816|gb|AAD39325.1|AC007258_14 Putative ATPase
            [Arabidopsis thaliana]
          Length = 1123

 Score =  382 bits (980), Expect = e-105
 Identities = 207/411 (50%), Positives = 278/411 (67%), Gaps = 3/411 (0%)
 Frame = +1

Query: 1    IFFMFGLLFSFCIIGAVYFSIWTEKKSPNHWYVGSANATGQYAQYAPGNPAFVGFASFIT 180
            I  +F +L + C+IGA+  SI T+++     Y+G  N+  +Y      N   +GF +F T
Sbjct: 298  IITIFCVLVTMCLIGAIGCSIVTDREDK---YLGLHNSDWEYR-----NGLMIGFFTFFT 349

Query: 181  SFILYGYLIPISLYVSMELVKIAQSMGYINLDRDMYHAETDTPALARTSNLNEELGMVNT 360
               L+  +IPISLYVS+E++K  QS  +IN D +MYHAET+TPA ARTSNLNEELG V  
Sbjct: 350  LVTLFSSIIPISLYVSIEMIKFIQSTQFINRDLNMYHAETNTPASARTSNLNEELGQVEY 409

Query: 361  ILSDKTGTLTRNVMEFFKCSIAGVPYGAGITEIEKANALRKGQVLDDRERPDAAKFRERF 540
            I SDKTGTLTRN+MEFFKCSI GV YG G+TEIEK  A R G  + + +R   A  RE+ 
Sbjct: 410  IFSDKTGTLTRNLMEFFKCSIGGVSYGCGVTEIEKGIAQRHGLKVQEEQRSTGA-IREKG 468

Query: 541  FNFYDDRLMGEAWYSAKDPVTIEMFFRLLAVCHTVIPDGPTDEKSIKYEAESPDEAALVV 720
            FNF D RLM  AW +  +P   +  FR LA+CHTV+P+G    + I Y+A SPDEAALV 
Sbjct: 469  FNFDDPRLMRGAWRNEPNPDLCKELFRCLAICHTVLPEGDESPEKIVYQAASPDEAALVT 528

Query: 721  AAKAFGFFFFKRTNTTITVRERTPRGTA---DVEYEVLNILEFNSTRKRMSVVVKEKAND 891
            AAK FGFFF++RT T + VRE          DV YE+LN+LEFNSTRKR SVV +   + 
Sbjct: 529  AAKNFGFFFYRRTPTMVYVRESHVEKMGKIQDVAYEILNVLEFNSTRKRQSVVCR-FPDG 587

Query: 892  KIIIFCKGADTVIYERLDPNYAPNEEMKTTTSRDMENFGAAGLRTLCLSYAEVDRDWYTN 1071
            +++++CKGAD VI+ERL       ++++  T   +E+FG++GLRTLCL+Y +++ + Y +
Sbjct: 588  RLVLYCKGADNVIFERLANGM---DDVRKVTREHLEHFGSSGLRTLCLAYKDLNPETYDS 644

Query: 1072 VWMPEWVNAKTSLEDRENKVGEVSEKIERKLRLLGCTGIEDKLQEGVPDCI 1224
             W  +++ AK++L DRE K+ EV+E IE+ L L+G T IEDKLQEGVP CI
Sbjct: 645  -WNEKFIQAKSALRDREKKLDEVAELIEKDLILIGSTAIEDKLQEGVPTCI 694

>sp|Q9LK90|ALA8_ARATH Potential phospholipid-transporting ATPase 8 (Aminophospholipid
            flippase 8) gi|11994492|dbj|BAB02533.1| P-type
            transporting ATPase-like protein [Arabidopsis thaliana]
          Length = 1189

 Score =  348 bits (892), Expect = 1e-94
 Identities = 195/421 (46%), Positives = 272/421 (64%), Gaps = 13/421 (3%)
 Frame = +1

Query: 1    IFFMFGLLFSFCIIGAVYFSIWTEKKSPNH-----WYVGSANATGQYAQYAPGNPAFVGF 165
            I+ +F +L      G+V+F I T +   ++     WY+   + T     Y P       F
Sbjct: 300  IYILFSILIVIAFTGSVFFGIATRRDMSDNGKLRRWYLRPDHTT---VFYDPRRAVAAAF 356

Query: 166  ASFITSFILYGYLIPISLYVSMELVKIAQSMGYINLDRDMYHAETDTPALARTSNLNEEL 345
              F+T+ +LYGYLIPISLYVS+E+VK+ QS+ +IN D++MYH ETD PA ARTSNLNEEL
Sbjct: 357  FHFLTALMLYGYLIPISLYVSIEVVKVLQSI-FINQDQEMYHEETDRPARARTSNLNEEL 415

Query: 346  GMVNTILSDKTGTLTRNVMEFFKCSIAGVPYGAGITEIEKANALRKG-----QVLDDRER 510
            G V+TILSDKTGTLT N MEF KCSIAG  YG G+TE+E A   +KG     +V D+   
Sbjct: 416  GQVDTILSDKTGTLTCNSMEFVKCSIAGTAYGRGMTEVEVALRKQKGLMTQEEVGDNESL 475

Query: 511  PDAAKFRERFFNFYDDRLMGEAWYSAKDPVTIEMFFRLLAVCHTVIPDGPTDEKSIKYEA 690
                +   + FNF+D+R++   W +  +   I+ FFR+LA+CHT IPD  +D   I YEA
Sbjct: 476  SIKEQKAVKGFNFWDERIVDGQWINQPNAELIQKFFRVLAICHTAIPDVNSDTGEITYEA 535

Query: 691  ESPDEAALVVAAKAFGFFFFKRTNTTITVRE--RTPRGTADVEYEVLNILEFNSTRKRMS 864
            ESPDEAA V+A++  GF FF R+ T+I++ E         D  YE+L++LEF+S+RKRMS
Sbjct: 536  ESPDEAAFVIASRELGFEFFSRSQTSISLHEIDHMTGEKVDRVYELLHVLEFSSSRKRMS 595

Query: 865  VVVKEKANDKIIIFCKGADTVIYERLDPNYAPNEEMKTTTSRDMENFGAAGLRTLCLSYA 1044
            V+V+   N ++++  KGAD+V+++RL  +   NE     T   ++ +  AGLRTL ++Y 
Sbjct: 596  VIVRNPEN-RLLLLSKGADSVMFKRLAKHGRQNER---ETKEHIKKYAEAGLRTLVITYR 651

Query: 1045 EVDRDWYTNVWMPEWVNAKTSL-EDRENKVGEVSEKIERKLRLLGCTGIEDKLQEGVPDC 1221
            E+D D Y  VW  E++NAKT + EDR+  +   ++KIE+ L LLG T +EDKLQ+GVPDC
Sbjct: 652  EIDEDEYI-VWEEEFLNAKTLVTEDRDALIDAAADKIEKDLILLGSTAVEDKLQKGVPDC 710

Query: 1222 I 1224
            I
Sbjct: 711  I 711

>ref|NP_177038.1| haloacid dehalogenase-like hydrolase family [Arabidopsis thaliana]
            gi|12229673|sp|Q9SX33|ALA9_ARATH Potential
            phospholipid-transporting ATPase 9 (Aminophospholipid
            flippase 9) gi|25404765|pir||F96711 hypothetical protein
            F24J5.6 [imported] - Arabidopsis thaliana
            gi|5734708|gb|AAD49973.1|AC008075_6 Similar to
            gb|AF067820 ATPase II from Homo sapiens and is a member
            of PF|00122 E1-E2 ATPases family. [Arabidopsis thaliana]
          Length = 1200

 Score =  346 bits (888), Expect = 4e-94
 Identities = 205/426 (48%), Positives = 265/426 (62%), Gaps = 18/426 (4%)
 Frame = +1

Query: 1    IFFMFGLLFSFCIIGAVYFSIWTEKKSPN----HWYVGSANATGQYAQYAPGNPAFVGFA 168
            I+ MF ++ +   IG+V F + T     +     WY+   +++     + P         
Sbjct: 307  IYLMFFMVITMAFIGSVIFGVTTRDDLKDGVMKRWYLRPDSSS---IFFDPKRAPVAAIY 363

Query: 169  SFITSFILYGYLIPISLYVSMELVKIAQSMGYINLDRDMYHAETDTPALARTSNLNEELG 348
             F+T+ +LY Y IPISLYVS+E+VK+ QS+ +IN D  MY+ E D PA ARTSNLNEELG
Sbjct: 364  HFLTAVMLYSYFIPISLYVSIEIVKVLQSI-FINQDIHMYYEEADKPARARTSNLNEELG 422

Query: 349  MVNTILSDKTGTLTRNVMEFFKCSIAGVPYGAGITEIEKANALRKGQVL---DDRERPDA 519
             V+TILSDKTGTLT N MEF KCS+AG  YG G+TE+E A   RKG  L    D    D 
Sbjct: 423  QVDTILSDKTGTLTCNSMEFIKCSVAGTAYGRGVTEVEMAMGRRKGGPLVFQSDENDIDM 482

Query: 520  AKFRE--------RFFNFYDDRLMGEAWYSAKDPVTIEMFFRLLAVCHTVIPDGPTDEKS 675
               +E        + FNF D+R+M   W +      I+ FFRLLAVCHTVIP+   D + 
Sbjct: 483  EYSKEAITEESTVKGFNFRDERIMNGNWVTETHADVIQKFFRLLAVCHTVIPEVDEDTEK 542

Query: 676  IKYEAESPDEAALVVAAKAFGFFFFKRTNTTITVRERTPRGTADVE--YEVLNILEFNST 849
            I YEAESPDEAA V+AA+  GF FF RT TTI+VRE        VE  Y+VLN+LEFNST
Sbjct: 543  ISYEAESPDEAAFVIAARELGFEFFNRTQTTISVRELDLVSGKRVERLYKVLNVLEFNST 602

Query: 850  RKRMSVVVKEKANDKIIIFCKGADTVIYERLDPNYAPNEEMKTTTSRDMENFGAAGLRTL 1029
            RKRMSV+V+E+ + K+++ CKGAD V++ERL  N     E +  T   +  +  AGLRTL
Sbjct: 603  RKRMSVIVQEE-DGKLLLLCKGADNVMFERLSKN---GREFEEETRDHVNEYADAGLRTL 658

Query: 1030 CLSYAEVDRDWYTNVWMPEWVNAKTSLE-DRENKVGEVSEKIERKLRLLGCTGIEDKLQE 1206
             L+Y E+D   Y  V+      AK+S+  DRE+ + EV+EKIE+ L LLG T +EDKLQ 
Sbjct: 659  ILAYRELDEKEY-KVFNERISEAKSSVSADRESLIEEVTEKIEKDLILLGATAVEDKLQN 717

Query: 1207 GVPDCI 1224
            GVPDCI
Sbjct: 718  GVPDCI 723

>ref|NP_189425.1| haloacid dehalogenase-like hydrolase family [Arabidopsis thaliana]
          Length = 1174

 Score =  346 bits (887), Expect = 5e-94
 Identities = 194/419 (46%), Positives = 271/419 (64%), Gaps = 11/419 (2%)
 Frame = +1

Query: 1    IFFMFGLLFSFCIIGAVYFSIWTEKKSPNH-----WYVGSANATGQYAQYAPGNPAFVGF 165
            I+ +F +L      G+V+F I T +   ++     WY+   + T     Y P       F
Sbjct: 300  IYILFSILIVIAFTGSVFFGIATRRDMSDNGKLRRWYLRPDHTT---VFYDPRRAVAAAF 356

Query: 166  ASFITSFILYGYLIPISLYVSMELVKIAQSMGYINLDRDMYHAETDTPALARTSNLNEEL 345
              F+T+ +LYGYLIPISLYVS+E+VK+ QS+ +IN D++MYH ETD PA ARTSNLNEEL
Sbjct: 357  FHFLTALMLYGYLIPISLYVSIEVVKVLQSI-FINQDQEMYHEETDRPARARTSNLNEEL 415

Query: 346  GMVNTILSDKTGTLTRNVMEFFKCSIAGVPYGAGITEIEKANALRKG-----QVLDDRER 510
            G V+TILSDKTGTLT N MEF KCSIAG  YG G+TE+E A   +KG     +V D+   
Sbjct: 416  GQVDTILSDKTGTLTCNSMEFVKCSIAGTAYGRGMTEVEVALRKQKGLMTQEEVGDNESL 475

Query: 511  PDAAKFRERFFNFYDDRLMGEAWYSAKDPVTIEMFFRLLAVCHTVIPDGPTDEKSIKYEA 690
                +   + FNF+D+R++   W +  +   I+ FFR+LA+CHT IPD  +D   I YEA
Sbjct: 476  SIKEQKAVKGFNFWDERIVDGQWINQPNAELIQKFFRVLAICHTAIPDVNSDTGEITYEA 535

Query: 691  ESPDEAALVVAAKAFGFFFFKRTNTTITVRERTPRGTADVEYEVLNILEFNSTRKRMSVV 870
            ESPDEAA V+A++  GF FF R+ T+I++ E          YE+L++LEF+S+RKRMSV+
Sbjct: 536  ESPDEAAFVIASRELGFEFFSRSQTSISLHEIDHM----TVYELLHVLEFSSSRKRMSVI 591

Query: 871  VKEKANDKIIIFCKGADTVIYERLDPNYAPNEEMKTTTSRDMENFGAAGLRTLCLSYAEV 1050
            V+   N ++++  KGAD+V+++RL  +   NE     T   ++ +  AGLRTL ++Y E+
Sbjct: 592  VRNPEN-RLLLLSKGADSVMFKRLAKHGRQNER---ETKEHIKKYAEAGLRTLVITYREI 647

Query: 1051 DRDWYTNVWMPEWVNAKTSL-EDRENKVGEVSEKIERKLRLLGCTGIEDKLQEGVPDCI 1224
            D D Y  VW  E++NAKT + EDR+  +   ++KIE+ L LLG T +EDKLQ+GVPDCI
Sbjct: 648  DEDEYI-VWEEEFLNAKTLVTEDRDALIDAAADKIEKDLILLGSTAVEDKLQKGVPDCI 705



EST assemble image


clone accession position
1 LCL094a03_r AV631441 1 324
2 MXL029h11_r BP094803 167 599
3 MXL088a10_r BP098142 398 923
4 MXL023g10_r BP094485 413 656
5 HCL068h10_r AV643397 538 776
6 HCL075d12_r AV643756 696 1228
7 LCL059a05_r AV629452 741 1099
8 LCL023a03_r AV627225 829 1054




Chlamydomonas reinhardtii
Kazusa DNA Research Institute