KCC002605A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC002605A_C01 KCC002605A_c01
caaacacatacCAAAAGCTGTAACTGCAGCTGGCTTGCCCTGTTTTAGGTTCTAGGAAAC
AAACAGCAATGCCTCGCTCGCTGTGACGGGCATCAGCAGCCGCTGGTCTATCAAATACTT
ACTTTCATAGTGTGCTAGACTAGCTCAGAAATCAGGTGGCATGTTGGCTGGGTAGGGGTC
TCGCGCGCACGGGCGAATGGCGGAGAACTACGTCCGCGGCGCCCTGCTGGGACAGGGCAC
GTTCGCGGCCGTGTACAAGGGTTCGGACAAGCGGACAGGGAAGCCGGTTGCTTTGAAGGA
GATCTTCCCTGATGACAAGGGAGGTGCGGAGGGGAAAAAGGGCCTGGACCCAACCGCGCT
GCGGGAGATCAAGCTGCTTCGCGAGTTGCAGCACGAACACATCATCCGGCTGATGGACGC
CTACCCGAAAAAGAAGTCGGTAGTGCTGGTTTTGGAGTACATGCACAGCGACCTGGAGGC
GGTGATCAAGGACGGCAACCTGGTCCTGGCTGCGGCGGACGTCAAGAGCTACATGCAGCA


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC002605A_C01 KCC002605A_c01
         (540 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|NP_177510.1| cell division protein kinase, putative [Arabido...   115  4e-25
ref|NP_176847.1| cell division protein kinase, putative [Arabido...   113  1e-24
ref|NP_173244.1| cell division protein kinase, putative [Arabido...   110  2e-23
gb|AAF78394.1|AC069551_27 T10O22.1 [Arabidopsis thaliana]             110  2e-23
sp|P29620|KC47_ORYSA CDC2+/CDC28-related protein kinase R2 gi|82...   107  1e-22

>ref|NP_177510.1| cell division protein kinase, putative [Arabidopsis thaliana]
           gi|25387092|pir||A96764 cell division protein kinase,
           43057-44962 [imported] - Arabidopsis thaliana
           gi|12324215|gb|AAG52081.1|AC012679_19 cell division
           protein kinase; 43057-44962 [Arabidopsis thaliana]
           gi|15147867|dbj|BAB62844.1| CDK-activating kinase 3
           [Arabidopsis thaliana] gi|17380738|gb|AAL36199.1|
           putative cell division protein kinase [Arabidopsis
           thaliana] gi|20259619|gb|AAM14166.1| putative cell
           division protein kinase [Arabidopsis thaliana]
          Length = 398

 Score =  115 bits (288), Expect = 4e-25
 Identities = 58/115 (50%), Positives = 88/115 (76%)
 Frame = +2

Query: 194 RMAENYVRGALLGQGTFAAVYKGSDKRTGKPVALKEIFPDDKGGAEGKKGLDPTALREIK 373
           ++A+ Y++  +LGQGT+  V+K +D + G+ VA+K+I    + G E K+G++ TALREIK
Sbjct: 6   KVADRYLKREVLGQGTYGVVFKATDTKNGETVAIKKI----RLGKE-KEGVNVTALREIK 60

Query: 374 LLRELQHEHIIRLMDAYPKKKSVVLVLEYMHSDLEAVIKDGNLVLAAADVKSYMQ 538
           LL+EL+H HII L+DA+P K+++ +V E+M +DLEAVI+D NL L+  DVKSY+Q
Sbjct: 61  LLKELKHPHIIELIDAFPHKENLHIVFEFMETDLEAVIRDRNLYLSPGDVKSYLQ 115

>ref|NP_176847.1| cell division protein kinase, putative [Arabidopsis thaliana]
           gi|12597763|gb|AAG60076.1|AC013288_10 cell division
           protein kinase, putative [Arabidopsis thaliana]
           gi|20521157|dbj|BAB91558.1| cdk-activating kinase 4
           [Arabidopsis thaliana] gi|22531034|gb|AAM97021.1| cell
           division protein kinase, putative [Arabidopsis thaliana]
           gi|23197980|gb|AAN15517.1| cell division protein kinase,
           putative [Arabidopsis thaliana]
          Length = 348

 Score =  113 bits (283), Expect = 1e-24
 Identities = 57/111 (51%), Positives = 81/111 (72%)
 Frame = +2

Query: 203 ENYVRGALLGQGTFAAVYKGSDKRTGKPVALKEIFPDDKGGAEGKKGLDPTALREIKLLR 382
           + Y+R  +LG+GT+  VYK +D +TGK VA+K+I   ++     K+G++ TALREIKLL+
Sbjct: 11  DRYLRRQILGEGTYGVVYKATDTKTGKTVAVKKIRLGNQ-----KEGVNFTALREIKLLK 65

Query: 383 ELQHEHIIRLMDAYPKKKSVVLVLEYMHSDLEAVIKDGNLVLAAADVKSYM 535
           EL H HI+ L+DA+P   S+ LV EYM +DLEAVI+D N+ L+  D+KSYM
Sbjct: 66  ELNHPHIVELIDAFPHDGSLHLVFEYMQTDLEAVIRDRNIFLSPGDIKSYM 116

>ref|NP_173244.1| cell division protein kinase, putative [Arabidopsis thaliana]
           gi|25287635|pir||H86315 hypothetical protein T10F20.5 -
           Arabidopsis thaliana gi|9719719|gb|AAF97821.1|AC034107_4
           Strong similarity to cdc2+/CDC28-related protein kinase
           from Oryza sativa gb|X58194 and contains a eukaryotic
           protein kinase PF|00069 domain.  ESTs gb|T43700,
           gb|AA395355, gb|AV548710, gb|AV539020, gb|AV559571 come
           from this gene. [Arabidopsis thaliana]
           gi|15147865|dbj|BAB62843.1| CDK-activating kinase 2
           [Arabidopsis thaliana] gi|20466422|gb|AAM20528.1|
           putative cdc2+/CDC28-related protein kinase [Arabidopsis
           thaliana] gi|22136358|gb|AAM91257.1| putative
           cdc2+/CDC28-related protein kinase [Arabidopsis
           thaliana]
          Length = 391

 Score =  110 bits (274), Expect = 2e-23
 Identities = 54/114 (47%), Positives = 88/114 (76%)
 Frame = +2

Query: 194 RMAENYVRGALLGQGTFAAVYKGSDKRTGKPVALKEIFPDDKGGAEGKKGLDPTALREIK 373
           ++A+ Y++  +LGQGT+  V+K +D +T + VA+K+I    + G + ++G++ TALREIK
Sbjct: 7   KVADRYLKQEVLGQGTYGVVFKATDTKTEQTVAIKKI----RLGKQ-REGVNITALREIK 61

Query: 374 LLRELQHEHIIRLMDAYPKKKSVVLVLEYMHSDLEAVIKDGNLVLAAADVKSYM 535
           +L+EL+H HII L+DA+P K+++ LV E+M +DLEAVI+D N+ L+ AD+KSY+
Sbjct: 62  MLKELKHPHIILLIDAFPHKENLHLVFEFMETDLEAVIRDSNIFLSPADIKSYL 115

>gb|AAF78394.1|AC069551_27 T10O22.1 [Arabidopsis thaliana]
          Length = 146

 Score =  110 bits (274), Expect = 2e-23
 Identities = 54/114 (47%), Positives = 88/114 (76%)
 Frame = +2

Query: 194 RMAENYVRGALLGQGTFAAVYKGSDKRTGKPVALKEIFPDDKGGAEGKKGLDPTALREIK 373
           ++A+ Y++  +LGQGT+  V+K +D +T + VA+K+I    + G + ++G++ TALREIK
Sbjct: 7   KVADRYLKQEVLGQGTYGVVFKATDTKTEQTVAIKKI----RLGKQ-REGVNITALREIK 61

Query: 374 LLRELQHEHIIRLMDAYPKKKSVVLVLEYMHSDLEAVIKDGNLVLAAADVKSYM 535
           +L+EL+H HII L+DA+P K+++ LV E+M +DLEAVI+D N+ L+ AD+KSY+
Sbjct: 62  MLKELKHPHIILLIDAFPHKENLHLVFEFMETDLEAVIRDSNIFLSPADIKSYL 115

>sp|P29620|KC47_ORYSA CDC2+/CDC28-related protein kinase R2 gi|82507|pir||S13934 protein
           kinase (EC 2.7.1.37) chain cdc2/cdc28 homolog - rice
           gi|20194|emb|CAA41172.1| cdc2+/CDC28-related protein
           kinase [Oryza sativa (japonica cultivar-group)]
          Length = 424

 Score =  107 bits (267), Expect = 1e-22
 Identities = 56/115 (48%), Positives = 84/115 (72%)
 Frame = +2

Query: 194 RMAENYVRGALLGQGTFAAVYKGSDKRTGKPVALKEIFPDDKGGAEGKKGLDPTALREIK 373
           R+A+ Y++  +LG+GT+  V+K  D +TG  VA+K+I        + K+G++ TALREIK
Sbjct: 14  RVADRYLKREVLGEGTYGVVFKAVDTKTGNTVAIKKIRL-----GKYKEGVNFTALREIK 68

Query: 374 LLRELQHEHIIRLMDAYPKKKSVVLVLEYMHSDLEAVIKDGNLVLAAADVKSYMQ 538
           LL+EL+  +II L+DA+P K ++ LV E+M +DLEAVI+D N+VL+ AD KSY+Q
Sbjct: 69  LLKELKDSNIIELIDAFPYKGNLHLVFEFMETDLEAVIRDRNIVLSPADTKSYIQ 123



EST assemble image


clone accession position
1 LCL096c04_r AV631565 1 540
2 HCL067h10_r AV643342 12 493




Chlamydomonas reinhardtii
Kazusa DNA Research Institute