Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC002591A_C01 KCC002591A_c01
(492 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pdb|1N0Q|A Chain A, 3ank: A Designed Ankyrin Repeat Protein With... 76 3e-13
pdb|1N0R|A Chain A, 4ank: A Designed Ankyrin Repeat Protein With... 76 3e-13
gb|AAO25691.1| ankyrin repeat protein E4_2 [synthetic construct] 69 2e-11
gb|AAO25690.1| ankyrin repeat protein E3_19 [synthetic construct] 67 1e-10
gb|AAO25692.1| ankyrin repeat protein E4_8 [synthetic construct] 67 2e-10
>pdb|1N0Q|A Chain A, 3ank: A Designed Ankyrin Repeat Protein With Three
Identical Consensus Repeats gi|28373836|pdb|1N0Q|B Chain
B, 3ank: A Designed Ankyrin Repeat Protein With Three
Identical Consensus Repeats
Length = 93
Score = 75.9 bits (185), Expect = 3e-13
Identities = 46/90 (51%), Positives = 55/90 (61%)
Frame = +2
Query: 221 SGATPLHLAAAAGLPAFVRELLLHGAPHDVMDNSGNVPLHLAAEQGSVESVVELLTGPGR 400
+G TPLHLAA G V+ LL GA + D +G PLHLAA G +E VV+LL G
Sbjct: 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLE-VVKLLLEAGA 59
Query: 401 KLMVKQKNRDGQTPLHLAVRNSHIEVVAKL 490
+ K KN G+TPLHLA RN H+EVV L
Sbjct: 60 DVNAKDKN--GRTPLHLAARNGHLEVVKLL 87
Score = 47.4 bits (111), Expect = 1e-04
Identities = 29/59 (49%), Positives = 35/59 (59%)
Frame = +2
Query: 221 SGATPLHLAAAAGLPAFVRELLLHGAPHDVMDNSGNVPLHLAAEQGSVESVVELLTGPG 397
+G TPLHLAA G V+ LL GA + D +G PLHLAA G +E VV+LL G
Sbjct: 34 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLE-VVKLLLEAG 91
>pdb|1N0R|A Chain A, 4ank: A Designed Ankyrin Repeat Protein With Four
Identical Consensus Repeats
Length = 126
Score = 75.9 bits (185), Expect = 3e-13
Identities = 46/90 (51%), Positives = 55/90 (61%)
Frame = +2
Query: 221 SGATPLHLAAAAGLPAFVRELLLHGAPHDVMDNSGNVPLHLAAEQGSVESVVELLTGPGR 400
+G TPLHLAA G V+ LL GA + D +G PLHLAA G +E VV+LL G
Sbjct: 34 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLE-VVKLLLEAGA 92
Query: 401 KLMVKQKNRDGQTPLHLAVRNSHIEVVAKL 490
+ K KN G+TPLHLA RN H+EVV L
Sbjct: 93 DVNAKDKN--GRTPLHLAARNGHLEVVKLL 120
Score = 75.9 bits (185), Expect = 3e-13
Identities = 46/90 (51%), Positives = 55/90 (61%)
Frame = +2
Query: 221 SGATPLHLAAAAGLPAFVRELLLHGAPHDVMDNSGNVPLHLAAEQGSVESVVELLTGPGR 400
+G TPLHLAA G V+ LL GA + D +G PLHLAA G +E VV+LL G
Sbjct: 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLE-VVKLLLEAGA 59
Query: 401 KLMVKQKNRDGQTPLHLAVRNSHIEVVAKL 490
+ K KN G+TPLHLA RN H+EVV L
Sbjct: 60 DVNAKDKN--GRTPLHLAARNGHLEVVKLL 87
Score = 47.4 bits (111), Expect = 1e-04
Identities = 29/59 (49%), Positives = 35/59 (59%)
Frame = +2
Query: 221 SGATPLHLAAAAGLPAFVRELLLHGAPHDVMDNSGNVPLHLAAEQGSVESVVELLTGPG 397
+G TPLHLAA G V+ LL GA + D +G PLHLAA G +E VV+LL G
Sbjct: 67 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLE-VVKLLLEAG 124
>gb|AAO25691.1| ankyrin repeat protein E4_2 [synthetic construct]
Length = 199
Score = 69.3 bits (168), Expect = 2e-11
Identities = 41/89 (46%), Positives = 52/89 (58%)
Frame = +2
Query: 224 GATPLHLAAAAGLPAFVRELLLHGAPHDVMDNSGNVPLHLAAEQGSVESVVELLTGPGRK 403
G TPLHLAA+ G V LL HGA + D +G PLHLAA+ G +E +VE+L G
Sbjct: 47 GNTPLHLAASKGHLEIVEVLLKHGADVNANDTNGTTPLHLAAQAGHLE-IVEVLLKHGAD 105
Query: 404 LMVKQKNRDGQTPLHLAVRNSHIEVVAKL 490
V + G TPLHLA + H+E+V L
Sbjct: 106 --VNASDELGSTPLHLAATHGHLEIVEVL 132
Score = 68.2 bits (165), Expect = 5e-11
Identities = 43/93 (46%), Positives = 52/93 (55%)
Frame = +2
Query: 212 NPVSGATPLHLAAAAGLPAFVRELLLHGAPHDVMDNSGNVPLHLAAEQGSVESVVELLTG 391
N +G TPLHLAA AG V LL HGA + D G+ PLHLAA G +E +VE+L
Sbjct: 76 NDTNGTTPLHLAAQAGHLEIVEVLLKHGADVNASDELGSTPLHLAATHGHLE-IVEVLLK 134
Query: 392 PGRKLMVKQKNRDGQTPLHLAVRNSHIEVVAKL 490
G V + G TPLHLA H+E+V L
Sbjct: 135 YGAD--VNADDTVGITPLHLAAFFGHLEIVEVL 165
Score = 58.2 bits (139), Expect = 5e-08
Identities = 36/82 (43%), Positives = 48/82 (57%)
Frame = +2
Query: 245 AAAAGLPAFVRELLLHGAPHDVMDNSGNVPLHLAAEQGSVESVVELLTGPGRKLMVKQKN 424
AA AG VR L+ +GA + D GN PLHLAA +G +E +VE+L G V +
Sbjct: 21 AARAGQDDEVRILMANGADVNADDQHGNTPLHLAASKGHLE-IVEVLLKHGAD--VNAND 77
Query: 425 RDGQTPLHLAVRNSHIEVVAKL 490
+G TPLHLA + H+E+V L
Sbjct: 78 TNGTTPLHLAAQAGHLEIVEVL 99
Score = 47.8 bits (112), Expect = 7e-05
Identities = 32/82 (39%), Positives = 46/82 (56%)
Frame = +2
Query: 224 GATPLHLAAAAGLPAFVRELLLHGAPHDVMDNSGNVPLHLAAEQGSVESVVELLTGPGRK 403
G+TPLHLAA G V LL +GA + D G PLHLAA G +E +VE+L G
Sbjct: 113 GSTPLHLAATHGHLEIVEVLLKYGADVNADDTVGITPLHLAAFFGHLE-IVEVLLKYGAD 171
Query: 404 LMVKQKNRDGQTPLHLAVRNSH 469
V +++ G+T +++ N +
Sbjct: 172 --VNAQDKFGKTAFDISIDNGN 191
>gb|AAO25690.1| ankyrin repeat protein E3_19 [synthetic construct]
Length = 166
Score = 67.0 bits (162), Expect = 1e-10
Identities = 41/89 (46%), Positives = 53/89 (59%)
Frame = +2
Query: 224 GATPLHLAAAAGLPAFVRELLLHGAPHDVMDNSGNVPLHLAAEQGSVESVVELLTGPGRK 403
G TPLHLAA G V LL +GA + +D SG+ PLHLAA++G +E +VE+L G
Sbjct: 47 GDTPLHLAARVGHLEIVEVLLKNGADVNALDFSGSTPLHLAAKRGHLE-IVEVLLKYGAD 105
Query: 404 LMVKQKNRDGQTPLHLAVRNSHIEVVAKL 490
V + G TPLHLA H+E+V L
Sbjct: 106 --VNADDTIGSTPLHLAADTGHLEIVEVL 132
Score = 54.7 bits (130), Expect = 6e-07
Identities = 35/82 (42%), Positives = 46/82 (55%)
Frame = +2
Query: 245 AAAAGLPAFVRELLLHGAPHDVMDNSGNVPLHLAAEQGSVESVVELLTGPGRKLMVKQKN 424
AA AG VR L+ +GA + D G+ PLHLAA G +E +VE+L G V +
Sbjct: 21 AARAGQDDEVRILMANGADVNAEDTYGDTPLHLAARVGHLE-IVEVLLKNGAD--VNALD 77
Query: 425 RDGQTPLHLAVRNSHIEVVAKL 490
G TPLHLA + H+E+V L
Sbjct: 78 FSGSTPLHLAAKRGHLEIVEVL 99
Score = 53.5 bits (127), Expect = 1e-06
Identities = 33/83 (39%), Positives = 49/83 (58%)
Frame = +2
Query: 221 SGATPLHLAAAAGLPAFVRELLLHGAPHDVMDNSGNVPLHLAAEQGSVESVVELLTGPGR 400
SG+TPLHLAA G V LL +GA + D G+ PLHLAA+ G +E +VE+L G
Sbjct: 79 SGSTPLHLAAKRGHLEIVEVLLKYGADVNADDTIGSTPLHLAADTGHLE-IVEVLLKYGA 137
Query: 401 KLMVKQKNRDGQTPLHLAVRNSH 469
V +++ G+T +++ N +
Sbjct: 138 D--VNAQDKFGKTAFDISIDNGN 158
>gb|AAO25692.1| ankyrin repeat protein E4_8 [synthetic construct]
Length = 199
Score = 66.6 bits (161), Expect = 2e-10
Identities = 41/91 (45%), Positives = 52/91 (57%)
Frame = +2
Query: 218 VSGATPLHLAAAAGLPAFVRELLLHGAPHDVMDNSGNVPLHLAAEQGSVESVVELLTGPG 397
V+G TPLHLAA G V LL +GA + +D G PLHLAA G +E +VE+L G
Sbjct: 78 VTGFTPLHLAAVWGHLEIVEVLLKNGADVNAIDTIGYTPLHLAANNGHLE-IVEVLLKNG 136
Query: 398 RKLMVKQKNRDGQTPLHLAVRNSHIEVVAKL 490
V + +G TPLHLA H+E+V L
Sbjct: 137 AD--VNAHDTNGVTPLHLAAHEGHLEIVEVL 165
Score = 61.6 bits (148), Expect = 5e-09
Identities = 41/89 (46%), Positives = 50/89 (56%)
Frame = +2
Query: 224 GATPLHLAAAAGLPAFVRELLLHGAPHDVMDNSGNVPLHLAAEQGSVESVVELLTGPGRK 403
G TPLHLAA G V LL +GA + D +G PLHLAA G +E +VE+L G
Sbjct: 47 GNTPLHLAADMGHLEIVEVLLKNGADVNADDVTGFTPLHLAAVWGHLE-IVEVLLKNGAD 105
Query: 404 LMVKQKNRDGQTPLHLAVRNSHIEVVAKL 490
V + G TPLHLA N H+E+V L
Sbjct: 106 --VNAIDTIGYTPLHLAANNGHLEIVEVL 132
Score = 54.7 bits (130), Expect = 6e-07
Identities = 36/82 (43%), Positives = 46/82 (55%)
Frame = +2
Query: 245 AAAAGLPAFVRELLLHGAPHDVMDNSGNVPLHLAAEQGSVESVVELLTGPGRKLMVKQKN 424
AA AG VR L+ +GA + D GN PLHLAA+ G +E +VE+L G V +
Sbjct: 21 AARAGQDDEVRILMANGADVNARDRDGNTPLHLAADMGHLE-IVEVLLKNGAD--VNADD 77
Query: 425 RDGQTPLHLAVRNSHIEVVAKL 490
G TPLHLA H+E+V L
Sbjct: 78 VTGFTPLHLAAVWGHLEIVEVL 99
Score = 50.1 bits (118), Expect = 1e-05
Identities = 32/82 (39%), Positives = 47/82 (57%)
Frame = +2
Query: 224 GATPLHLAAAAGLPAFVRELLLHGAPHDVMDNSGNVPLHLAAEQGSVESVVELLTGPGRK 403
G TPLHLAA G V LL +GA + D +G PLHLAA +G +E +VE+L G
Sbjct: 113 GYTPLHLAANNGHLEIVEVLLKNGADVNAHDTNGVTPLHLAAHEGHLE-IVEVLLKYGAD 171
Query: 404 LMVKQKNRDGQTPLHLAVRNSH 469
V +++ G+T +++ N +
Sbjct: 172 --VNAQDKFGKTAFDISIDNGN 191
Score = 35.4 bits (80), Expect = 0.38
Identities = 20/55 (36%), Positives = 29/55 (52%)
Frame = +2
Query: 221 SGATPLHLAAAAGLPAFVRELLLHGAPHDVMDNSGNVPLHLAAEQGSVESVVELL 385
+G TPLHLAA G V LL +GA + D G ++ + G+ E + E+L
Sbjct: 145 NGVTPLHLAAHEGHLEIVEVLLKYGADVNAQDKFGKTAFDISIDNGN-EDLAEIL 198
