KCC002583A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC002583A_C01 KCC002583A_c01
gcttgtaTCAATGCAAAACGCGGCCGGTCATAAGCGGCTGAGCCTGCTGACACGATTGTG
ACTCGTTGCTAGTTCAGCAGCCGGTGGCCCCAGGTGTTGTCGCTGATACGTAAATGTCAT
TGGTAATTCAATGCAATGCTAGCGCGCCTGTAGGCGCGACCGACTAAGCTTGAAGAAGAA
AGCTGAGGCGACTTGCACGAGTTCGTGCCGCCAGTTGCGCCATCATACGGACAAGGGGGA
GGCATGCAAAGCATTGCACATCGCATTATTAGTGGCTTGGGCAGCGCGGTGGACAGCTCC
GGAGCATGGCGCTGCGCCCGTCAATCTCTTCACGTCGGGTCCACGGCTTCGTGCGCGGAG
TTTCAGTTAAATACCGTTAGGGCGGAGAGCTTCTACGACTCGACGGTAGAGAAGTATGCG
GCGCAAGACGTGGAGGTGTTGTCTCTGCGTCAAATGCTAAGCTTCGGTCGCAATGCATGG
AACGATCCGGACAAGGTCCTCAAGAGCGCTCGATATGTGCAGCGGGAGCTGCCCAAGCGC
CTGGCGCGGCGGCTGCTGGACCTGCAGCTGCTGCCGTACATCGTGGTGACCAAACCACAC
ATCACAAAGGTGTACAACCAGTACTACATCAGCTTTGAGACGCT


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC002583A_C01 KCC002583A_c01
         (644 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

gb|AAK70872.1|AF387365_1 pyruvate dehydrogenase kinase-like prot...   261  6e-69
ref|XP_323097.1| related to branched-chain alpha-ketoacid dehydr...    64  1e-09
ref|XP_323702.1| hypothetical protein [Neurospora crassa] gi|289...    54  2e-06
gb|AAG46146.1|AC082644_28 putative pyruvate dehydrogenase kinase...    54  2e-06
gb|AAH09872.1| BCKDK protein [Homo sapiens]                            53  3e-06

>gb|AAK70872.1|AF387365_1 pyruvate dehydrogenase kinase-like protein [Chlamydomonas
           reinhardtii]
          Length = 512

 Score =  261 bits (667), Expect = 6e-69
 Identities = 131/133 (98%), Positives = 131/133 (98%)
 Frame = +1

Query: 244 MQSIAHRIISGLGSAVDSSGAWRCARQSLHVGSTASCAEFQLNTVRAESFYDSTVEKYAA 423
           MQSIAHRIISGLGSAVDSSGAWRCARQSLHVGSTASCAEFQLNTVRAESFYDSTVEKYAA
Sbjct: 1   MQSIAHRIISGLGSAVDSSGAWRCARQSLHVGSTASCAEFQLNTVRAESFYDSTVEKYAA 60

Query: 424 QDVEVLSLRQMLSFGRNAWNDPDKVLKSARYVQRELPKRLARRLLDLQLLPYIVVTKPHI 603
           QDVEVLSLRQMLSFGRNAWNDPDKVLKSARYVQRELPKRLARRLLDLQLLPYIVVT PHI
Sbjct: 61  QDVEVLSLRQMLSFGRNAWNDPDKVLKSARYVQRELPKRLARRLLDLQLLPYIVVTNPHI 120

Query: 604 TKVYNQYYISFET 642
            KVYNQYYISFET
Sbjct: 121 KKVYNQYYISFET 133

>ref|XP_323097.1| related to branched-chain alpha-ketoacid dehydrogenase kinase
           [MIPS] [Neurospora crassa] gi|16944688|emb|CAC28800.2|
           related to branched-chain alpha-ketoacid dehydrogenase
           kinase [Neurospora crassa] gi|28922726|gb|EAA31949.1|
           related to branched-chain alpha-ketoacid dehydrogenase
           kinase [MIPS] [Neurospora crassa]
          Length = 430

 Score = 64.3 bits (155), Expect = 1e-09
 Identities = 29/60 (48%), Positives = 43/60 (71%)
 Frame = +1

Query: 463 FGRNAWNDPDKVLKSARYVQRELPKRLARRLLDLQLLPYIVVTKPHITKVYNQYYISFET 642
           FGR+      +++ SA YV+ ELP R+A R+ D+Q LPY+VVT PH+ +VY+ YY +F+T
Sbjct: 3   FGRSLTES--RLISSANYVRTELPTRIAHRIRDMQRLPYVVVTNPHMNEVYDLYYSAFDT 60

>ref|XP_323702.1| hypothetical protein [Neurospora crassa] gi|28917389|gb|EAA27094.1|
           hypothetical protein [Neurospora crassa]
          Length = 659

 Score = 53.9 bits (128), Expect = 2e-06
 Identities = 31/75 (41%), Positives = 45/75 (59%)
 Frame = +1

Query: 418 AAQDVEVLSLRQMLSFGRNAWNDPDKVLKSARYVQRELPKRLARRLLDLQLLPYIVVTKP 597
           A Q +  LSL  ++  GR   +  + +L SAR+    LP RLA R+  L+ LPYIVV+ P
Sbjct: 222 ANQPLHQLSLADLVKHGRPPLS-AEALLSSARFTLSLLPIRLAHRIQALRNLPYIVVSNP 280

Query: 598 HITKVYNQYYISFET 642
           +I+++YN Y  S  T
Sbjct: 281 NISRIYNNYQHSLST 295

>gb|AAG46146.1|AC082644_28 putative pyruvate dehydrogenase kinase [Oryza sativa]
          Length = 365

 Score = 53.9 bits (128), Expect = 2e-06
 Identities = 31/66 (46%), Positives = 44/66 (65%)
 Frame = +1

Query: 439 LSLRQMLSFGRNAWNDPDKVLKSARYVQRELPKRLARRLLDLQLLPYIVVTKPHITKVYN 618
           ++LR M+ FG  A      +L+SA++++RELP R+ARR LDL  LP+ + TKP I KV +
Sbjct: 27  VTLRYMMEFG--ARPTERNLLRSAQFLRRELPIRIARRALDLDSLPFGLSTKPAILKVRD 84

Query: 619 QYYISF 636
            Y  SF
Sbjct: 85  WYLDSF 90

>gb|AAH09872.1| BCKDK protein [Homo sapiens]
          Length = 335

 Score = 53.1 bits (126), Expect = 3e-06
 Identities = 33/85 (38%), Positives = 49/85 (56%), Gaps = 1/85 (1%)
 Frame = +1

Query: 388 SFYDSTVEKYAAQDVEV-LSLRQMLSFGRNAWNDPDKVLKSARYVQRELPKRLARRLLDL 564
           SFY+ +    AA+   V L+   ML  GR+   D   +LKSARY+Q+ELP R+A R+   
Sbjct: 52  SFYNQSAIDAAAEKPSVRLTPTMMLYAGRS--QDGSHLLKSARYLQQELPVRIAHRIKGF 109

Query: 565 QLLPYIVVTKPHITKVYNQYYISFE 639
           + LP+I+   P I  V+  Y  +F+
Sbjct: 110 RCLPFIIGCNPTILHVHELYIRAFQ 134



EST assemble image


clone accession position
1 MXL069g07_r BP097086 1 490
2 MXL032f06_r BP094924 8 409
3 HCL063e10_r AV643090 133 644




Chlamydomonas reinhardtii
Kazusa DNA Research Institute