Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC002579A_C01 KCC002579A_c01
(491 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAO63769.1| protein kinase [Chlamydomonas reinhardtii] 198 3e-50
gb|AAK30075.1|AF324829_1 serine-alanine-and proline-rich protein... 41 0.009
ref|NP_055656.1| synaptosomal-associated protein, 91kDa homolog;... 39 0.026
ref|NP_002865.1| UV excision repair protein RAD23 homolog B; XP-... 39 0.026
emb|CAB89292.1| dJ120N9.1 (KIAA0656 protein (similar to clathrin... 39 0.026
>gb|AAO63769.1| protein kinase [Chlamydomonas reinhardtii]
Length = 499
Score = 198 bits (504), Expect = 3e-50
Identities = 103/103 (100%), Positives = 103/103 (100%)
Frame = +2
Query: 182 MQAQQGTLRRSSAGSTRQATAPSRAAAFKPCSFTCTRRGQHMVTRATGPELASLAEAVTS 361
MQAQQGTLRRSSAGSTRQATAPSRAAAFKPCSFTCTRRGQHMVTRATGPELASLAEAVTS
Sbjct: 1 MQAQQGTLRRSSAGSTRQATAPSRAAAFKPCSFTCTRRGQHMVTRATGPELASLAEAVTS 60
Query: 362 VVAAATAAAPAPLQPAVATIGGDVAALATLSPTLPGIGRLTAL 490
VVAAATAAAPAPLQPAVATIGGDVAALATLSPTLPGIGRLTAL
Sbjct: 61 VVAAATAAAPAPLQPAVATIGGDVAALATLSPTLPGIGRLTAL 103
>gb|AAK30075.1|AF324829_1 serine-alanine-and proline-rich protein [Trypanosoma cruzi]
Length = 345
Score = 40.8 bits (94), Expect = 0.009
Identities = 21/35 (60%), Positives = 26/35 (74%)
Frame = -3
Query: 444 ASAATSPPMVATAGCRGAGAAAVAAATTDVTASAS 340
A+ + SPP AT G GA +AAVAAATTD +A+AS
Sbjct: 139 AAGSPSPPPPATPGSAGANSAAVAAATTDPSAAAS 173
>ref|NP_055656.1| synaptosomal-associated protein, 91kDa homolog; clathrin coat
assembly protein AP180; assembly protein, 180kDa [Homo
sapiens] gi|27805394|sp|O60641|A180_HUMAN Clathrin coat
assembly protein AP180 (Clathrin coat associated protein
AP180) (91 kDa synaptosomal-associated protein)
gi|3327126|dbj|BAA31631.1| KIAA0656 protein [Homo
sapiens]
Length = 907
Score = 39.3 bits (90), Expect = 0.026
Identities = 24/63 (38%), Positives = 33/63 (52%)
Frame = -3
Query: 477 RPMPGSVGDRVASAATSPPMVATAGCRGAGAAAVAAATTDVTASASDASSGPVARVTMCC 298
+P SV +A+T+PP+ ATA AA AAATT TA+A+ ++ A T
Sbjct: 499 KPPETSVPVVTPTASTAPPVPATAPSPAPAVAAAAAATTAATAAATTTTTTSAATATTAP 558
Query: 297 PRL 289
P L
Sbjct: 559 PAL 561
>ref|NP_002865.1| UV excision repair protein RAD23 homolog B; XP-C repair
complementing protein; XP-C repair complementing complex
58 kDa; RAD23, yeast homolog of, B [Homo sapiens]
gi|1709985|sp|P54727|R23B_HUMAN UV excision repair
protein RAD23 homolog B (HHR23B) (XP-C repair
complementing complex 58 kDa protein) (P58)
gi|1082758|pir||S44346 RAD23 protein homolog - human
gi|498148|dbj|BAA04652.1| XP-C repair complementing
protein (p58/HHR23B) [Homo sapiens]
gi|17384416|emb|CAD13275.1| bA131A5.1 (similar to
S.cerevisiae RAD23) [Homo sapiens]
gi|24414631|gb|AAN47194.1| RAD23 homolog B (S.
cerevisiae) [Homo sapiens]
Length = 409
Score = 39.3 bits (90), Expect = 0.026
Identities = 20/56 (35%), Positives = 28/56 (49%)
Frame = -3
Query: 486 AVRRPMPGSVGDRVASAATSPPMVATAGCRGAGAAAVAAATTDVTASASDASSGPV 319
AV + G GDR + A PP A+ G + A A AAATT T + + + P+
Sbjct: 221 AVEYLLMGIPGDRESQAVVDPPQAASTGAPQSSAVAAAAATTTATTTTTSSGGHPL 276
>emb|CAB89292.1| dJ120N9.1 (KIAA0656 protein (similar to clathrin assembly lymphoid
myeloid leukemia protein (CALM))) [Homo sapiens]
Length = 902
Score = 39.3 bits (90), Expect = 0.026
Identities = 24/63 (38%), Positives = 33/63 (52%)
Frame = -3
Query: 477 RPMPGSVGDRVASAATSPPMVATAGCRGAGAAAVAAATTDVTASASDASSGPVARVTMCC 298
+P SV +A+T+PP+ ATA AA AAATT TA+A+ ++ A T
Sbjct: 494 KPPETSVPVVTPTASTAPPVPATAPSPAPAVAAAAAATTAATAAATTTTTTSAATATTAP 553
Query: 297 PRL 289
P L
Sbjct: 554 PAL 556
