KCC002577A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC002577A_C01 KCC002577A_c01
CGACAAGCCCACGTTGTAAACTCACCCAAGCCTGAGTCCATTCAAACTGCGCCTTGCCGT
TGCTCACGCTTATTGCGTAGACCGGCCCCGGCCCTCCAGCATTTGGTCTTGCGGGCCTAA
TGGAGACCTCGGGACGGCTCTACAGAAACCGGGAGAGCTCGGGAGCACTCTGGAGAATGC
CGGAATGCTCTCGAACGCGCTCAGCCAAGTCGCGATGTAGCGCCCCGCCAGGGCCGCCAG
TATATAATAGGTATTGGGACCACACGTGCATTCACAATCAGCCATTGCTATACACACGAT
TTAGAGCTGCTACCCAACGCGACACTGCCAGTTGTACCGACACACGGAACAAGCTTCAAT
TCTAGCAGTATTCAATTGCAGCGGAATACAAGCTTCTAATCTACTGATTTATTACACGTC
AAACTAGCAACACCGTCTGTGGCAACCACTCGCTTTAGCACCGTCACCGTCGCCTGGAAA
GATGTCGTTTGACACCAAGAAAGCGACAGAGAAGGTCAATAATGTGCTTGGAGACGCGAT
TAACCTAGCCAAGGAGGACAAGCACGCGGCGCTGACGCCGACTCATCTAGCGGTTGTTCT
CTTCGAGGAGCCGCATGGCCTGGCCAAGGTTGCTGCCACCAAGGTGGCCGGCGAGGAGGT
GTGGCGCTCCGCCATCCGAGTGCTGCGCAAGCGCCTCACCAAGCTGCCCAAGGTCGACCC
CGCGCCCGAATCCGTCTCGCCCGGCCGCGAGCTGAGCAAGGTCCTGACCGCGGCCTGCCA
AGCTGCAGAAGGACCGCGGCGATGCCTTCCTGGGCACCGACACGCTGCTGACGGCGGTGA
TCAACGCCGCCGAGGTGTCGGAGGCGCTGGGAGAGGCGGGCATCAGCAAGGCTGCAGCTG
GAGACCGCGCTGAGCGAGGTGCGGCAGGCGGCCGGCGGCGGCCCCATCAACAGCGAGACG
GCGGACGCCAACTTCGACGCGCTGGCAAAGTACGGCACCGACCTCACTGCCAACGCCGCA
CGTGCCGACCCTGTGATCGGCCGTGACGACGAGATCCGGCGTGTGGTGCGCGTGCTGTGC
CGTCGCACCAAATAACAATCCGGTGCTTATCGGCGAGCCGGGTGTGGGCAAGACCGCCAT
TGTGGAGGGACTGGCGCAGCGCATCGTCAAGAACGACGTGCCTGAGACGCTCCAGGGCGT
GCGCCTGATCAGCCTGGACATGGGGTCGCTGGTGGCGGGCGCCAAGTACCGCGGCGAGTT
CGAGGAGCGGCTCAAGGCGGTGCTGAACGAGGTGGCCCAGCAGCAG


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC002577A_C01 KCC002577A_c01
         (1306 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

gb|AAA67927.1| AtHSP101                                               115  2e-51
ref|NP_565083.1| heat shock protein 101 (HSP101) [Arabidopsis th...   115  2e-51
gb|AAL32674.1| heat shock protein 101 [Arabidopsis thaliana]          115  5e-51
pir||T07807 endopeptidase Clp (EC 3.4.21.-) ATP-binding chain SB...   114  3e-50
gb|AAD25223.1|AF077337_1 heat shock protein 101; 101 kDa heat sh...   114  4e-48

>gb|AAA67927.1| AtHSP101
          Length = 911

 Score =  115 bits (289), Expect(3) = 2e-51
 Identities = 58/67 (86%), Positives = 62/67 (91%)
 Frame = +2

Query: 1094 NNPVLIGEPGVGKTAIVEGLAQRIVKNDVPETLQGVRLISLDMGSLVAGAKYRGEFEERL 1273
            NNPVLIGEPGVGKTA+VEGLAQRIVK DVP +L  VRLISLDMG+LVAGAKYRGEFEERL
Sbjct: 201  NNPVLIGEPGVGKTAVVEGLAQRIVKGDVPNSLTDVRLISLDMGALVAGAKYRGEFEERL 260

Query: 1274 KAVLNEV 1294
            K+VL EV
Sbjct: 261  KSVLKEV 267

 Score = 67.4 bits (163), Expect(3) = 2e-51
 Identities = 35/62 (56%), Positives = 41/62 (65%), Gaps = 2/62 (3%)
 Frame = +1

Query: 913  SEVRQAAG--GGPINSETADANFDALAKYGTDLTANAARADPVIGRDDEIRRVVRVLCRR 1086
            SEV +  G  G  + S + D NF AL  YG DL   A + DPVIGRD+EIRRVVR+L RR
Sbjct: 139  SEVEKLRGKEGKKVESASGDTNFQALKTYGRDLVEQAGKLDPVIGRDEEIRRVVRILSRR 198

Query: 1087 TK 1092
            TK
Sbjct: 199  TK 200

 Score = 63.9 bits (154), Expect(3) = 2e-51
 Identities = 38/101 (37%), Positives = 50/101 (48%)
 Frame = +2

Query: 497 KKATEKVNNVLGDAINLAKEDKHAALTPTHLAVVLFEEPHGLAKVAATKVAGEEVWRSAI 676
           +K T K N  +  A  LA    HA  TP HLA  L  +P G+   A +   GE   +SA 
Sbjct: 4   EKFTHKTNETIATAHELAVNAGHAQFTPLHLAGALISDPTGIFPQAISSAGGENAAQSAE 63

Query: 677 RVLRKRLTKLPKVDPAPESVSPGRELSKVLTAACQAAEGPR 799
           RV+ + L KLP   P P+ +     L KV+  A QAA+  R
Sbjct: 64  RVINQALKKLPSQSPPPDDIPASSSLIKVIRRA-QAAQKSR 103

 Score = 36.6 bits (83), Expect = 1.0
 Identities = 18/70 (25%), Positives = 33/70 (46%)
 Frame = +3

Query: 708 PRSTPRPNPSRPAAS*ARS*PRPAKLQKDRGDAFLGTDTLLTAVINAAEVSEALGEAGIS 887
           P  +P P+    ++S  +   R    QK RGD  L  D L+  ++  +++ + L E G++
Sbjct: 74  PSQSPPPDDIPASSSLIKVIRRAQAAQKSRGDTHLAVDQLIMGLLEDSQIRDLLNEVGVA 133

Query: 888 KAAAGDRAER 917
            A      E+
Sbjct: 134 TARVKSEVEK 143

>ref|NP_565083.1| heat shock protein 101 (HSP101) [Arabidopsis thaliana]
            gi|21264430|sp|P42730|H101_ARATH Heat shock protein 101
            gi|25289887|pir||F96771 heat shock protein 101,
            13093-16240 [imported] - Arabidopsis thaliana
            gi|6715468|gb|AAF26423.1|AF218796_1 heat shock protein
            101 [Arabidopsis thaliana]
            gi|12324908|gb|AAG52410.1|AC020579_12 heat shock protein
            101; 13093-16240 [Arabidopsis thaliana]
          Length = 911

 Score =  115 bits (289), Expect(3) = 2e-51
 Identities = 58/67 (86%), Positives = 62/67 (91%)
 Frame = +2

Query: 1094 NNPVLIGEPGVGKTAIVEGLAQRIVKNDVPETLQGVRLISLDMGSLVAGAKYRGEFEERL 1273
            NNPVLIGEPGVGKTA+VEGLAQRIVK DVP +L  VRLISLDMG+LVAGAKYRGEFEERL
Sbjct: 201  NNPVLIGEPGVGKTAVVEGLAQRIVKGDVPNSLTDVRLISLDMGALVAGAKYRGEFEERL 260

Query: 1274 KAVLNEV 1294
            K+VL EV
Sbjct: 261  KSVLKEV 267

 Score = 67.4 bits (163), Expect(3) = 2e-51
 Identities = 35/62 (56%), Positives = 41/62 (65%), Gaps = 2/62 (3%)
 Frame = +1

Query: 913  SEVRQAAG--GGPINSETADANFDALAKYGTDLTANAARADPVIGRDDEIRRVVRVLCRR 1086
            SEV +  G  G  + S + D NF AL  YG DL   A + DPVIGRD+EIRRVVR+L RR
Sbjct: 139  SEVEKLRGKEGKKVESASGDTNFQALKTYGRDLVEQAGKLDPVIGRDEEIRRVVRILSRR 198

Query: 1087 TK 1092
            TK
Sbjct: 199  TK 200

 Score = 63.9 bits (154), Expect(3) = 2e-51
 Identities = 38/101 (37%), Positives = 50/101 (48%)
 Frame = +2

Query: 497 KKATEKVNNVLGDAINLAKEDKHAALTPTHLAVVLFEEPHGLAKVAATKVAGEEVWRSAI 676
           +K T K N  +  A  LA    HA  TP HLA  L  +P G+   A +   GE   +SA 
Sbjct: 4   EKFTHKTNETIATAHELAVNAGHAQFTPLHLAGALISDPTGIFPQAISSAGGENAAQSAE 63

Query: 677 RVLRKRLTKLPKVDPAPESVSPGRELSKVLTAACQAAEGPR 799
           RV+ + L KLP   P P+ +     L KV+  A QAA+  R
Sbjct: 64  RVINQALKKLPSQSPPPDDIPASSSLIKVIRRA-QAAQKSR 103

 Score = 36.6 bits (83), Expect = 1.0
 Identities = 18/70 (25%), Positives = 33/70 (46%)
 Frame = +3

Query: 708 PRSTPRPNPSRPAAS*ARS*PRPAKLQKDRGDAFLGTDTLLTAVINAAEVSEALGEAGIS 887
           P  +P P+    ++S  +   R    QK RGD  L  D L+  ++  +++ + L E G++
Sbjct: 74  PSQSPPPDDIPASSSLIKVIRRAQAAQKSRGDTHLAVDQLIMGLLEDSQIRDLLNEVGVA 133

Query: 888 KAAAGDRAER 917
            A      E+
Sbjct: 134 TARVKSEVEK 143

>gb|AAL32674.1| heat shock protein 101 [Arabidopsis thaliana]
          Length = 460

 Score =  115 bits (289), Expect(3) = 5e-51
 Identities = 58/67 (86%), Positives = 62/67 (91%)
 Frame = +2

Query: 1094 NNPVLIGEPGVGKTAIVEGLAQRIVKNDVPETLQGVRLISLDMGSLVAGAKYRGEFEERL 1273
            NNPVLIGEPGVGKTA+VEGLAQRIVK DVP +L  VRLISLDMG+LVAGAKYRGEFEERL
Sbjct: 201  NNPVLIGEPGVGKTAVVEGLAQRIVKGDVPNSLTDVRLISLDMGALVAGAKYRGEFEERL 260

Query: 1274 KAVLNEV 1294
            K+VL EV
Sbjct: 261  KSVLKEV 267

 Score = 66.2 bits (160), Expect(3) = 5e-51
 Identities = 36/71 (50%), Positives = 45/71 (62%)
 Frame = +1

Query: 880  ASARLQLETALSEVRQAAGGGPINSETADANFDALAKYGTDLTANAARADPVIGRDDEIR 1059
            A+AR++ E    E  +   G  + S + D NF AL  YG DL   A + DPVIGRD+EIR
Sbjct: 133  ATARVKSEF---EKLRGKEGKKVESASGDTNFQALKTYGRDLVEQAGKLDPVIGRDEEIR 189

Query: 1060 RVVRVLCRRTK 1092
            RVVR+L RRTK
Sbjct: 190  RVVRILSRRTK 200

 Score = 63.9 bits (154), Expect(3) = 5e-51
 Identities = 38/101 (37%), Positives = 50/101 (48%)
 Frame = +2

Query: 497 KKATEKVNNVLGDAINLAKEDKHAALTPTHLAVVLFEEPHGLAKVAATKVAGEEVWRSAI 676
           +K T K N  +  A  LA    HA  TP HLA  L  +P G+   A +   GE   +SA 
Sbjct: 4   EKFTHKTNETIATAHELAVNAGHAQFTPLHLAGALISDPTGIFPQAISSAGGENAAQSAE 63

Query: 677 RVLRKRLTKLPKVDPAPESVSPGRELSKVLTAACQAAEGPR 799
           RV+ + L KLP   P P+ +     L KV+  A QAA+  R
Sbjct: 64  RVINQALKKLPSQSPPPDDIPASSSLIKVIRRA-QAAQKSR 103

 Score = 35.8 bits (81), Expect = 1.7
 Identities = 18/70 (25%), Positives = 33/70 (46%)
 Frame = +3

Query: 708 PRSTPRPNPSRPAAS*ARS*PRPAKLQKDRGDAFLGTDTLLTAVINAAEVSEALGEAGIS 887
           P  +P P+    ++S  +   R    QK RGD  L  D L+  ++  +++ + L E G++
Sbjct: 74  PSQSPPPDDIPASSSLIKVIRRAQAAQKSRGDTHLAVDQLIMGLLEDSQIRDLLNEVGVA 133

Query: 888 KAAAGDRAER 917
            A      E+
Sbjct: 134 TARVKSEFEK 143

>pir||T07807 endopeptidase Clp (EC 3.4.21.-) ATP-binding chain SB100 [similarity]
            - soybean gi|530207|gb|AAA66338.1| heat shock protein
          Length = 911

 Score =  114 bits (286), Expect(3) = 3e-50
 Identities = 56/71 (78%), Positives = 63/71 (87%)
 Frame = +2

Query: 1094 NNPVLIGEPGVGKTAIVEGLAQRIVKNDVPETLQGVRLISLDMGSLVAGAKYRGEFEERL 1273
            NNPVL+GEPGVGKTA+VEGLAQRIV+ DVP  L  VRLI+LDMG+LVAGAKYRGEFEERL
Sbjct: 202  NNPVLVGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLIALDMGALVAGAKYRGEFEERL 261

Query: 1274 KAVLNEVAQQQ 1306
            KAVL EV + +
Sbjct: 262  KAVLKEVEEAE 272

 Score = 66.6 bits (161), Expect(3) = 3e-50
 Identities = 35/62 (56%), Positives = 41/62 (65%), Gaps = 2/62 (3%)
 Frame = +1

Query: 913  SEVRQAAG--GGPINSETADANFDALAKYGTDLTANAARADPVIGRDDEIRRVVRVLCRR 1086
            SEV +  G  G  + S + D NF AL  YG DL   A + DPVIGRD+EIRRVVR+L RR
Sbjct: 140  SEVDKLRGKEGKKVESASGDTNFQALKTYGRDLVEQAGKLDPVIGRDEEIRRVVRILSRR 199

Query: 1087 TK 1092
            TK
Sbjct: 200  TK 201

 Score = 62.0 bits (149), Expect(3) = 3e-50
 Identities = 40/102 (39%), Positives = 51/102 (49%), Gaps = 1/102 (0%)
 Frame = +2

Query: 497 KKATEKVNNVLGDAINLAKEDKHAALTPTHLAVVLFEEPHGLAKVAATKV-AGEEVWRSA 673
           +K T K N  L  A  LA    HA LTP HLA  L  +P+G+  +A      GEE  R+ 
Sbjct: 4   EKFTHKTNEALASAHELAMSSGHAQLTPIHLAHALISDPNGIFVLAINSAGGGEESARAV 63

Query: 674 IRVLRKRLTKLPKVDPAPESVSPGRELSKVLTAACQAAEGPR 799
            RVL + L KLP   P P+ V     L + +  A QAA+  R
Sbjct: 64  ERVLNQALKKLPCQSPPPDEVPASTNLVRAIRRA-QAAQKSR 104

 Score = 36.6 bits (83), Expect = 1.0
 Identities = 18/70 (25%), Positives = 34/70 (47%)
 Frame = +3

Query: 708 PRSTPRPNPSRPAAS*ARS*PRPAKLQKDRGDAFLGTDTLLTAVINAAEVSEALGEAGIS 887
           P  +P P+    + +  R+  R    QK RGD  L  D L+  ++  +++ + L EAG++
Sbjct: 75  PCQSPPPDEVPASTNLVRAIRRAQAAQKSRGDTRLAVDQLILGILEDSQIGDLLKEAGVA 134

Query: 888 KAAAGDRAER 917
            A      ++
Sbjct: 135 VAKVESEVDK 144

>gb|AAD25223.1|AF077337_1 heat shock protein 101; 101 kDa heat shock protein [Zea mays]
            gi|4928488|gb|AAD33606.1|AF133840_1 heat shock protein
            HSP101 [Zea mays]
          Length = 912

 Score =  114 bits (286), Expect(3) = 4e-48
 Identities = 57/71 (80%), Positives = 63/71 (88%)
 Frame = +2

Query: 1094 NNPVLIGEPGVGKTAIVEGLAQRIVKNDVPETLQGVRLISLDMGSLVAGAKYRGEFEERL 1273
            NNPVLIGEPGVGKTA+VEGLAQRIV+ DVP  L  VRLI+LDMG+LVAGAKYRGEFEERL
Sbjct: 203  NNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLLDVRLIALDMGALVAGAKYRGEFEERL 262

Query: 1274 KAVLNEVAQQQ 1306
            KAVL EV + +
Sbjct: 263  KAVLKEVEEAE 273

 Score = 65.9 bits (159), Expect(3) = 4e-48
 Identities = 35/71 (49%), Positives = 45/71 (63%)
 Frame = +1

Query: 880  ASARLQLETALSEVRQAAGGGPINSETADANFDALAKYGTDLTANAARADPVIGRDDEIR 1059
            ++AR++ E    E  +   G  + S + D NF AL  YG DL   A + DPVIGRD+EIR
Sbjct: 135  SAARVRAEL---EKLRGGEGRRVESASGDTNFQALKTYGRDLVEQAGKLDPVIGRDEEIR 191

Query: 1060 RVVRVLCRRTK 1092
            RVVR+L RRTK
Sbjct: 192  RVVRILSRRTK 202

 Score = 55.8 bits (133), Expect(3) = 4e-48
 Identities = 39/100 (39%), Positives = 50/100 (50%), Gaps = 2/100 (2%)
 Frame = +2

Query: 506 TEKVNNVLGDAINLAKEDKHAALTPTHLAVVLFEEPHGLAKVAATKVAGEE--VWRSAIR 679
           T K N  +  A  +A E  HA LTP HLA VL  +  G+ + A T  +G +     S  R
Sbjct: 7   THKTNEAIVGAHEIAVEAGHAQLTPLHLAAVLAADKGGILRQAITGASGGDGAAGDSFER 66

Query: 680 VLRKRLTKLPKVDPAPESVSPGRELSKVLTAACQAAEGPR 799
           VL   L KLP   P P+SV     L KV+  A Q+A+  R
Sbjct: 67  VLNNSLKKLPSQSPPPDSVPASTALIKVIRRA-QSAQKKR 105

 Score = 42.0 bits (97), Expect = 0.024
 Identities = 24/78 (30%), Positives = 38/78 (47%)
 Frame = +3

Query: 708 PRSTPRPNPSRPAAS*ARS*PRPAKLQKDRGDAFLGTDTLLTAVINAAEVSEALGEAGIS 887
           P  +P P+    + +  +   R    QK RGD+ L  D LL  ++  +++S+ L EAG+S
Sbjct: 76  PSQSPPPDSVPASTALIKVIRRAQSAQKKRGDSHLAVDQLLLGLLEDSQISDCLKEAGVS 135

Query: 888 KAAAGDRAERGAAGGRRR 941
            A      E+   G  RR
Sbjct: 136 AARVRAELEKLRGGEGRR 153



EST assemble image


clone accession position
1 HCL084h05_r AV644259 1 564
2 LCL097g08_r AV631660 85 272
3 MXL040a02_r BP095326 95 554
4 LCL099d07_r AV631762 96 634
5 LCL096d09_r AV631578 121 417
6 HCL062d07_r AV643021 139 640
7 LCL058f07_r AV629432 359 827
8 MXL019f09_r BP094217 381 736
9 MXL032h01_r BP094938 381 600
10 MXL005e11_r BP093246 381 829
11 MXL063f03_r BP096716 386 724
12 MXL079d03_r BP097668 387 757
13 MXL004f11_r BP093183 395 826
14 MXL025e07_r BP094603 396 793
15 MXL074a10_r BP097335 397 836
16 MXL071f12_r BP097201 397 837
17 MXL020b04_r BP094251 397 926
18 MXL071g02_r BP097203 397 763
19 MXL010e06_r BP093583 397 585
20 MXL025h06_r BP094624 397 712
21 MXL096g07_r BP098639 397 722
22 MXL063c08_r BP096697 397 782
23 MXL087b12_r BP098107 397 732
24 MXL098c10_r BP098740 397 780
25 MXL083e10_r BP097920 397 829
26 MXL098e09_r BP098753 397 753
27 MXL072b11_r BP097232 397 797
28 MXL058g01_r BP096438 397 790
29 MXL013c11_r BP093762 400 821
30 MXL006e06_r BP093307 400 670
31 MXL069d03_r BP097060 400 866
32 MXL006b10_r BP093286 401 700
33 MXL091b06_r BP098300 401 868
34 MXL022g06_r BP094416 401 927
35 MXL094h07_r BP098535 401 769
36 MXL014a05_r BP093803 406 918
37 MXL049e02_r BP095924 408 812
38 MXL036c12_r BP095129 408 799
39 MXL095b10_r BP098546 409 782
40 MXL076b09_r BP097466 409 774
41 MXL072b01_r BP097225 409 862
42 MXL003b08_r BP093084 430 630
43 MXL001d01_r BP092953 432 677
44 MXL069f06_r BP097077 437 792
45 MXL088c09_r BP098151 437 936
46 MXL071b11_r BP097170 451 819
47 MXL076a10_r BP097458 454 826
48 MXL096g06_r BP098638 469 835
49 MXL039c12_r BP095283 473 863
50 LCL055f05_r AV629267 483 952
51 MXL049h03_r BP095946 507 904
52 MXL005d02_r BP093229 538 977
53 MXL065h09_r BP096852 552 951
54 MXL038g11_r BP095248 570 896
55 HCL078e08_r AV643927 608 1097
56 MXL033f03_r BP094971 621 1011
57 MXL051b06_r BP096017 651 1111
58 MXL013d10_r BP093766 904 1257
59 MXL032a10_r BP094904 1023 1412




Chlamydomonas reinhardtii
Kazusa DNA Research Institute