Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC002574A_C01 KCC002574A_c01
(458 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_233556.2| similar to Ser/Arg-related nuclear matrix prote... 39 0.036
ref|NP_058079.1| Ser/Arg-related nuclear matrix protein; plenty-... 39 0.036
gb|AAH36187.1| SRRM1 protein [Homo sapiens] 38 0.047
gb|AAO38851.1| sublingual apomucin [Mus musculus] 37 0.080
ref|ZP_00102602.1| COG0739: Membrane proteins related to metallo... 37 0.080
>ref|XP_233556.2| similar to Ser/Arg-related nuclear matrix protein;
plenty-of-prolines-101; serine/arginine repetitive
matrix protein 1 [Rattus norvegicus]
Length = 958
Score = 38.5 bits (88), Expect = 0.036
Identities = 30/98 (30%), Positives = 43/98 (43%), Gaps = 10/98 (10%)
Frame = +3
Query: 165 PQRHATRALP--KWRRCCSACGRASARQPSSRRRSPRNRRSAR--------RHLPALLAL 314
P RH P + RR ++ +S+ SSR RSP + R R L +
Sbjct: 392 PPRHRRSRSPGRRRRRSSASLSGSSSSSSSSRSRSPPKKPPKRTSSPPRKTRRLSPSASP 451
Query: 315 PRPRQHPSR*ARP*PRALHAHTSGVGLRSAEHSVSLAP 428
PR R PS A P P+ H+ T R+ + VS++P
Sbjct: 452 PRRRHRPSSPATPPPKTRHSPTPQQSNRARKSRVSVSP 489
Score = 32.3 bits (72), Expect = 2.6
Identities = 28/70 (40%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
Frame = +3
Query: 225 RASARQPSSRRR-SPRNRRSARRHLPALLALPRPRQHPSR*ARP*PRALHAHTSGVGLRS 401
R+ +R S RRR SPR R S RR P P PR SR R A SG S
Sbjct: 360 RSRSRSYSPRRRPSPRRRPSPRRRTPPRRMPPPPRHRRSRSPGRRRRRSSASLSG-SSSS 418
Query: 402 AEHSVSLAPP 431
+ S S +PP
Sbjct: 419 SSSSRSRSPP 428
Score = 32.3 bits (72), Expect = 2.6
Identities = 25/91 (27%), Positives = 38/91 (41%), Gaps = 5/91 (5%)
Frame = +3
Query: 168 QRHATRALPKWRRCCSACGRASARQPSSRRRSPRNRRSARRHLPALLALPRPRQHPSR*A 347
++ + P+ R + R +R PS R R+R +R + P P PR+ PS
Sbjct: 325 KKEKEKTRPRSRSRSKSRSRTRSRSPSHTRPRRRHRSRSRSYSPR--RRPSPRRRPSPRR 382
Query: 348 RP*PRAL-----HAHTSGVGLRSAEHSVSLA 425
R PR + H + G R S SL+
Sbjct: 383 RTPPRRMPPPPRHRRSRSPGRRRRRSSASLS 413
Score = 30.4 bits (67), Expect = 9.8
Identities = 16/33 (48%), Positives = 17/33 (51%)
Frame = -1
Query: 281 APPVARGPPPRARLPSACPTAG*TTSPPLRQRS 183
APP PPPR R P T SPP R+RS
Sbjct: 612 APPPPPPPPPRRRRSPTPPPRRRTPSPPPRRRS 644
>ref|NP_058079.1| Ser/Arg-related nuclear matrix protein; plenty-of-prolines-101;
serine/arginine repetitive matrix protein 1 [Mus
musculus] gi|3153821|gb|AAC17422.1|
plenty-of-prolines-101; POP101; SH3-philo-protein [Mus
musculus]
Length = 897
Score = 38.5 bits (88), Expect = 0.036
Identities = 30/98 (30%), Positives = 43/98 (43%), Gaps = 10/98 (10%)
Frame = +3
Query: 165 PQRHATRALP--KWRRCCSACGRASARQPSSRRRSPRNRRSAR--------RHLPALLAL 314
P RH P + RR ++ +S+ SSR RSP + R R L +
Sbjct: 333 PPRHRRSRSPGRRRRRSSASLSGSSSSSSSSRSRSPPKKPPKRTSSPPRKTRRLSPSASP 392
Query: 315 PRPRQHPSR*ARP*PRALHAHTSGVGLRSAEHSVSLAP 428
PR R PS A P P+ H+ T R+ + VS++P
Sbjct: 393 PRRRHRPSSPATPPPKTRHSPTPQQSNRTRKSRVSVSP 430
Score = 32.3 bits (72), Expect = 2.6
Identities = 28/70 (40%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
Frame = +3
Query: 225 RASARQPSSRRR-SPRNRRSARRHLPALLALPRPRQHPSR*ARP*PRALHAHTSGVGLRS 401
R+ +R S RRR SPR R S RR P P PR SR R A SG S
Sbjct: 301 RSRSRSYSPRRRPSPRRRPSPRRRTPPRRMPPPPRHRRSRSPGRRRRRSSASLSG-SSSS 359
Query: 402 AEHSVSLAPP 431
+ S S +PP
Sbjct: 360 SSSSRSRSPP 369
Score = 32.3 bits (72), Expect = 2.6
Identities = 25/91 (27%), Positives = 38/91 (41%), Gaps = 5/91 (5%)
Frame = +3
Query: 168 QRHATRALPKWRRCCSACGRASARQPSSRRRSPRNRRSARRHLPALLALPRPRQHPSR*A 347
++ + P+ R + R +R PS R R+R +R + P P PR+ PS
Sbjct: 266 KKEKEKTRPRSRSRSKSRSRTRSRSPSHTRPRRRHRSRSRSYSPR--RRPSPRRRPSPRR 323
Query: 348 RP*PRAL-----HAHTSGVGLRSAEHSVSLA 425
R PR + H + G R S SL+
Sbjct: 324 RTPPRRMPPPPRHRRSRSPGRRRRRSSASLS 354
>gb|AAH36187.1| SRRM1 protein [Homo sapiens]
Length = 904
Score = 38.1 bits (87), Expect = 0.047
Identities = 30/98 (30%), Positives = 43/98 (43%), Gaps = 10/98 (10%)
Frame = +3
Query: 165 PQRHATRALP--KWRRCCSACGRASARQPSSRRRSPRNRRSAR--------RHLPALLAL 314
P RH P + RR ++ +S+ SSR RSP + R R L +
Sbjct: 335 PPRHRRSRSPVRRRRRSSASLSGSSSSSSSSRSRSPPKKPPKRTSSPPRKTRRLSPSASP 394
Query: 315 PRPRQHPSR*ARP*PRALHAHTSGVGLRSAEHSVSLAP 428
PR R PS A P P+ H+ T R+ + VS++P
Sbjct: 395 PRRRHRPSPPATPPPKTRHSPTPQQSNRTRKSRVSVSP 432
Score = 32.0 bits (71), Expect = 3.4
Identities = 28/70 (40%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
Frame = +3
Query: 225 RASARQPSSRRR-SPRNRRSARRHLPALLALPRPRQHPSR*ARP*PRALHAHTSGVGLRS 401
R+ +R S RRR SPR R S RR P P PR SR R A SG S
Sbjct: 303 RSRSRSYSPRRRPSPRRRPSPRRRTPPRRMPPPPRHRRSRSPVRRRRRSSASLSG-SSSS 361
Query: 402 AEHSVSLAPP 431
+ S S +PP
Sbjct: 362 SSSSRSRSPP 371
>gb|AAO38851.1| sublingual apomucin [Mus musculus]
Length = 814
Score = 37.4 bits (85), Expect = 0.080
Identities = 24/98 (24%), Positives = 44/98 (44%)
Frame = +2
Query: 161 SAPTACDPSAAEVAEMLFSLRSGKRSAAELEEEVPAQPEERSSSSTGSACTATAAPAPKP 340
SA TA S++ + + +G + + R+++++ + ++APA
Sbjct: 288 SATTAAPASSSASSATTPAETAGSTTGPAVSTTSAGSTSARAATTSPGGSSGSSAPASST 347
Query: 341 LSKALTASSTRSYVWRGPKKCRTLGQFGSSAPVAASVA 454
+A T +ST + T+G GSSAP A+S A
Sbjct: 348 SGRAATTTSTATTTTTTTTTATTVGSAGSSAPTASSTA 385
Score = 37.4 bits (85), Expect = 0.080
Identities = 24/98 (24%), Positives = 44/98 (44%)
Frame = +2
Query: 161 SAPTACDPSAAEVAEMLFSLRSGKRSAAELEEEVPAQPEERSSSSTGSACTATAAPAPKP 340
SA TA S++ + + +G + + R+++++ + ++APA
Sbjct: 125 SATTAAPASSSASSATTPAETAGSTTGPAVSTTSAGSTSARAATTSPGGSSGSSAPASST 184
Query: 341 LSKALTASSTRSYVWRGPKKCRTLGQFGSSAPVAASVA 454
+A T +ST + T+G GSSAP A+S A
Sbjct: 185 SGRAATTTSTATTTTTTTTTATTVGSAGSSAPTASSTA 222
Score = 34.7 bits (78), Expect = 0.52
Identities = 18/58 (31%), Positives = 31/58 (53%)
Frame = +2
Query: 281 RSSSSTGSACTATAAPAPKPLSKALTASSTRSYVWRGPKKCRTLGQFGSSAPVAASVA 454
R+++++ + ++APA +A T +ST + T+G GSSAP A+S A
Sbjct: 2 RAATTSPGGSSGSSAPASSTSGRAATTTSTATTTTTTTTTATTVGSAGSSAPTASSTA 59
>ref|ZP_00102602.1| COG0739: Membrane proteins related to metalloendopeptidases
[Desulfitobacterium hafniense]
Length = 347
Score = 37.4 bits (85), Expect = 0.080
Identities = 24/58 (41%), Positives = 29/58 (49%)
Frame = +2
Query: 284 SSSSTGSACTATAAPAPKPLSKALTASSTRSYVWRGPKKCRTLGQFGSSAPVAASVAI 457
SSSS GS+ T +APAP P A S R WR P LG+F ++ P V I
Sbjct: 198 SSSSGGSSATRPSAPAPAPAPAAPIDSGIR---WRWPADGPLLGRFVANEPTKQGVDI 252
