Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC002571A_C01 KCC002571A_c01
(479 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAF08805.1|AF192747_1 synapsin Ia [Lampetra fluviatilis] 34 0.78
gb|AAF08806.1|AF192748_1 synapsin Ib [Lampetra fluviatilis] 34 0.78
ref|NP_902935.1| hypothetical protein CV3265 [Chromobacterium vi... 33 2.3
ref|NP_251631.1| hypothetical protein [Pseudomonas aeruginosa PA... 32 5.1
ref|ZP_00087999.1| COG1028: Dehydrogenases with different specif... 32 5.1
>gb|AAF08805.1|AF192747_1 synapsin Ia [Lampetra fluviatilis]
Length = 687
Score = 34.3 bits (77), Expect = 0.78
Identities = 32/107 (29%), Positives = 40/107 (36%), Gaps = 5/107 (4%)
Frame = +1
Query: 145 SGAGGGDNAQRRTGSAA-PPGSKSA*ECI*SPCNKFMLVATATGLPSPGRQLRCVQREQQ 321
SG GGG TG+ P GS +A P A + P PG Q R Q
Sbjct: 53 SGGGGGSGGGGTTGAGVGPAGSAAATSGAAPPAASVSPAAQSPATPQPGEQRRLSQSSGG 112
Query: 322 CLANS-GAIYYGCQG---TKCHGIRPSNYRWAGLGGATLGCAQGHVG 450
A + G I G G + + +R + AGL T G G G
Sbjct: 113 GEAKAGGGITSGASGFLSSLSNAVRQTTAAAAGLVEQTAGSVSGSAG 159
>gb|AAF08806.1|AF192748_1 synapsin Ib [Lampetra fluviatilis]
Length = 642
Score = 34.3 bits (77), Expect = 0.78
Identities = 32/107 (29%), Positives = 40/107 (36%), Gaps = 5/107 (4%)
Frame = +1
Query: 145 SGAGGGDNAQRRTGSAA-PPGSKSA*ECI*SPCNKFMLVATATGLPSPGRQLRCVQREQQ 321
SG GGG TG+ P GS +A P A + P PG Q R Q
Sbjct: 53 SGGGGGSGGGGTTGAGVGPAGSAAATSGAAPPAASVSPAAQSPATPQPGEQRRLSQSSGG 112
Query: 322 CLANS-GAIYYGCQG---TKCHGIRPSNYRWAGLGGATLGCAQGHVG 450
A + G I G G + + +R + AGL T G G G
Sbjct: 113 GEAKAGGGITSGASGFLSSLSNAVRQTTAAAAGLVEQTAGSVSGSAG 159
>ref|NP_902935.1| hypothetical protein CV3265 [Chromobacterium violaceum ATCC 12472]
gi|34104571|gb|AAQ60929.1| hypothetical protein CV3265
[Chromobacterium violaceum ATCC 12472]
Length = 494
Score = 32.7 bits (73), Expect = 2.3
Identities = 21/60 (35%), Positives = 29/60 (48%)
Frame = -3
Query: 438 LSAAQCCSSQSGPSIIGRPDPVAFSSLASVINRSAVSEALLLSLDAAQLATRRRQPGGRS 259
+ A+ C + GP + RPD + F V S + + L L A +LA RRR PG S
Sbjct: 194 IEASGCVDRERGPGRVARPDVLGF--YCPVQEESYLLCLVDLVLQAPRLAARRRLPGWTS 251
>ref|NP_251631.1| hypothetical protein [Pseudomonas aeruginosa PA01]
gi|11349744|pir||D83278 hypothetical protein PA2941
[imported] - Pseudomonas aeruginosa (strain PAO1)
gi|9949037|gb|AAG06329.1|AE004720_5 hypothetical protein
PA2941 [Pseudomonas aeruginosa PAO1]
Length = 214
Score = 31.6 bits (70), Expect = 5.1
Identities = 24/61 (39%), Positives = 28/61 (45%)
Frame = +3
Query: 192 RPAWLKVGLGMYLVTM*QIHACGYGHRAAVAWSPAALRPKRAAVPR*QRSDLLRMPRN*M 371
RP L+ GLG A G A+ W P LR + PR QR DLLR PR+
Sbjct: 8 RPGALRGGLG---------GALSQGAEGAIQWLPTLLRGR----PR-QRRDLLRQPRSRR 53
Query: 372 P 374
P
Sbjct: 54 P 54
>ref|ZP_00087999.1| COG1028: Dehydrogenases with different specificities (related to
short-chain alcohol dehydrogenases) [Pseudomonas
fluorescens PfO-1]
Length = 299
Score = 31.6 bits (70), Expect = 5.1
Identities = 18/53 (33%), Positives = 24/53 (44%)
Frame = -3
Query: 423 CCSSQSGPSIIGRPDPVAFSSLASVINRSAVSEALLLSLDAAQLATRRRQPGG 265
C G I+G+ P A SS A VIN + + +L L AA +A G
Sbjct: 130 CAGIVRGEKILGKNGPHALSSFAQVINVNLIGSFNMLRLAAAAIAESEANADG 182
