Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC002567A_C01 KCC002567A_c01
(496 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAL33655.1|AF440228_1 histone deacetylase [Zea mays] 218 4e-56
ref|NP_190054.2| expressed protein [Arabidopsis thaliana] gi|250... 209 2e-53
pir||T47443 hypothetical protein T18B22.80 - Arabidopsis thalian... 195 3e-49
sp|P56517|HDA1_CHICK Histone deacetylase 1 (HD1) gi|2791684|gb|A... 192 1e-48
ref|NP_775343.1| histone deacetylase 1 [Danio rerio] gi|21105403... 192 2e-48
>gb|AAL33655.1|AF440228_1 histone deacetylase [Zea mays]
Length = 430
Score = 218 bits (554), Expect = 4e-56
Identities = 89/143 (62%), Positives = 119/143 (82%)
Frame = +1
Query: 67 KNKVAYFYDREFQEFYFGQNHPMKPHRLAMTHHLVLGYGLHKKMDVFRPRRAHPAELAQF 246
K++++YFYD + YFG NHPMKPHRL MTHHLVL YGLH+KM+++RP +A+P ELAQF
Sbjct: 4 KDRISYFYDGDVGNVYFGPNHPMKPHRLCMTHHLVLSYGLHQKMEIYRPHKAYPIELAQF 63
Query: 247 HTEDYIEFLSKVTPDSAAKLGNQLRQYNINDDCPIFDNMFKFCQLYAGASIEGAVKLNHN 426
H+ DY+EFL ++TPDS ++L +YN+ +DCP+FDN+F+FCQ+YAG +++ A +LNH
Sbjct: 64 HSADYVEFLHRITPDSQHLYASELTRYNLGEDCPVFDNLFEFCQIYAGGTLDAARRLNHK 123
Query: 427 LCDIAINWSGGLHHAKKGEASGF 495
+CDIAINW+GGLHHAKK EASGF
Sbjct: 124 ICDIAINWAGGLHHAKKCEASGF 146
>ref|NP_190054.2| expressed protein [Arabidopsis thaliana] gi|25082914|gb|AAN72014.1|
putative protein [Arabidopsis thaliana]
gi|30387509|gb|AAP31920.1| At3g44680 [Arabidopsis
thaliana]
Length = 426
Score = 209 bits (532), Expect = 2e-53
Identities = 85/143 (59%), Positives = 117/143 (81%)
Frame = +1
Query: 67 KNKVAYFYDREFQEFYFGQNHPMKPHRLAMTHHLVLGYGLHKKMDVFRPRRAHPAELAQF 246
K+K++YFYD + YFG NHPMKPHRL MTHHL+L YGLH KM+V+RP +A+P E+AQF
Sbjct: 4 KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLILAYGLHSKMEVYRPHKAYPIEMAQF 63
Query: 247 HTEDYIEFLSKVTPDSAAKLGNQLRQYNINDDCPIFDNMFKFCQLYAGASIEGAVKLNHN 426
H+ DY+EFL ++ P++ N++ +YN+ +DCP+F+++F+FCQLYAG +I+ A +LN+
Sbjct: 64 HSPDYVEFLQRINPENQNLFPNEMARYNLGEDCPVFEDLFEFCQLYAGGTIDAARRLNNK 123
Query: 427 LCDIAINWSGGLHHAKKGEASGF 495
LCDIAINW+GGLHHAKK +ASGF
Sbjct: 124 LCDIAINWAGGLHHAKKCDASGF 146
>pir||T47443 hypothetical protein T18B22.80 - Arabidopsis thaliana
gi|6967116|emb|CAB72470.1| putative protein [Arabidopsis
thaliana]
Length = 419
Score = 195 bits (495), Expect = 3e-49
Identities = 79/128 (61%), Positives = 107/128 (82%)
Frame = +1
Query: 112 YFGQNHPMKPHRLAMTHHLVLGYGLHKKMDVFRPRRAHPAELAQFHTEDYIEFLSKVTPD 291
YFG NHPMKPHRL MTHHL+L YGLH KM+V+RP +A+P E+AQFH+ DY+EFL ++ P+
Sbjct: 16 YFGPNHPMKPHRLCMTHHLILAYGLHSKMEVYRPHKAYPIEMAQFHSPDYVEFLQRINPE 75
Query: 292 SAAKLGNQLRQYNINDDCPIFDNMFKFCQLYAGASIEGAVKLNHNLCDIAINWSGGLHHA 471
+ N++ +YN+ +DCP+F+++F+FCQLYAG +I+ A +LN+ LCDIAINW+GGLHHA
Sbjct: 76 NQNLFPNEMARYNLGEDCPVFEDLFEFCQLYAGGTIDAARRLNNKLCDIAINWAGGLHHA 135
Query: 472 KKGEASGF 495
KK +ASGF
Sbjct: 136 KKCDASGF 143
>sp|P56517|HDA1_CHICK Histone deacetylase 1 (HD1) gi|2791684|gb|AAB96923.1| histone
deacetylase-1; HD-1 [Gallus gallus]
gi|2829214|gb|AAC00504.1| erythrocyte histone
deacetylase [Gallus gallus]
Length = 480
Score = 192 bits (489), Expect = 1e-48
Identities = 77/148 (52%), Positives = 114/148 (77%)
Frame = +1
Query: 52 MTGARKNKVAYFYDREFQEFYFGQNHPMKPHRLAMTHHLVLGYGLHKKMDVFRPRRAHPA 231
+T K KV Y+YD + +Y+GQ HPMKPHR+ MTH+L+L YGL++KM+++RP +A+
Sbjct: 3 LTQGTKRKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAE 62
Query: 232 ELAQFHTEDYIEFLSKVTPDSAAKLGNQLRQYNINDDCPIFDNMFKFCQLYAGASIEGAV 411
E+ ++H++DYI+FL + PD+ ++ Q++++N+ +DCP+FD +F+FCQL AG S+ AV
Sbjct: 63 EMTKYHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSAGGSVASAV 122
Query: 412 KLNHNLCDIAINWSGGLHHAKKGEASGF 495
KLN DIA+NW+GGLHHAKK EASGF
Sbjct: 123 KLNKQQTDIAVNWAGGLHHAKKSEASGF 150
>ref|NP_775343.1| histone deacetylase 1 [Danio rerio]
gi|21105403|gb|AAM34645.1|AF506201_1 histone deaceytlase
1 [Danio rerio]
Length = 480
Score = 192 bits (488), Expect = 2e-48
Identities = 77/143 (53%), Positives = 112/143 (77%)
Frame = +1
Query: 67 KNKVAYFYDREFQEFYFGQNHPMKPHRLAMTHHLVLGYGLHKKMDVFRPRRAHPAELAQF 246
K KV Y+YD + +Y+GQ HPMKPHR+ MTH+L+L YGL++KM+++RP +A+ E+ ++
Sbjct: 9 KKKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMTKY 68
Query: 247 HTEDYIEFLSKVTPDSAAKLGNQLRQYNINDDCPIFDNMFKFCQLYAGASIEGAVKLNHN 426
H++DYI+FL + PD+ ++ Q++++N+ +DCP+FD +F+FCQL G S+ GAVKLN
Sbjct: 69 HSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVKLNKQ 128
Query: 427 LCDIAINWSGGLHHAKKGEASGF 495
DIAINW+GGLHHAKK EASGF
Sbjct: 129 QTDIAINWAGGLHHAKKSEASGF 151
