KCC002559A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC002559A_C01 KCC002559A_c01
gggcaatctgaacacagcggttttCCCTTAAAGCAGTGAAAAGCTTGTTTGAGACGTCTT
CAGTTTGTCTGTCAGGAGTGCTGCTAGCGCTTCACCGTCTCAGCCACGTTGCGAACGCGG
GTTGATAACAAGGGCTTCCAAGACAATTAGCTCACCTGCGCTGGGTAGAAAGCAAGCTCC
GTCTCGCAAGGCGATGCGCCTCACAGGGGGGGGAGGTTTGCCCTCCCGGCGACGGACTAC
TAGTCAATCTGGAGCCGCAACAGTGACATATAGTCTCCGGAGCGCTTTGCTCTCGCCCGC
GGCGTTGTGGGCCTTCATCGGCGCCACAATTGTTGTTCTCTTGTTCTCATTCGGCGTGTC
TCTTCACGGCAAGGACGCGCCGACAGCCAAAGTTCAGCCTCTCCGCTTGAGGCGGCTCCA
GGGCGGTGGCGGCCTTCAATCGCTCCTCTCGTCTGGGAGGACCGTCGGAGCGGCCGAGGC
AGACACGCGCTTCGGCTCGATTTATCATGACCAGCTCCTGGGAAAGTTCAAATTGGACCA
GGGTCGCGCCGGCGGTCTGGCGCAGGAGCTGGTGTCCACCCTCAAAGAGATGGAGTCGCC
CGACGGCGCGGCACTGACGGGCGTGCTGTTCTCCAGCCCCTGGTCCTGGTTCGAGCTGGA
GCAGGGCGCCATACGCTTC


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC002559A_C01 KCC002559A_c01
         (679 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

dbj|BAC32043.1| unnamed protein product [Mus musculus]                 39  0.072
gb|AAH16681.1| KIAA1811 protein [Homo sapiens]                         39  0.094
ref|NP_115806.1| KIAA1811 protein [Homo sapiens] gi|19401874|gb|...    39  0.094
emb|CAD38950.1| hypothetical protein [Homo sapiens]                    39  0.094
sp|Q8TDC3|KI11_HUMAN Probable serine/threonine-protein kinase KI...    39  0.094

>dbj|BAC32043.1| unnamed protein product [Mus musculus]
          Length = 181

 Score = 38.9 bits (89), Expect = 0.072
 Identities = 34/95 (35%), Positives = 45/95 (46%), Gaps = 10/95 (10%)
 Frame = -2

Query: 627 STPVSAAPSGDSISLRVDTSSCA-------RPPARPWSNLNFPRSWS**IEPKRVSASAA 469
           + P SA+ +G+  + R    +C        RPP RPWS  ++P   S      R  ASA+
Sbjct: 46  NAPPSASGAGEPRNRRRHRRACGGAGGARKRPPQRPWSPASWPGPASRGHFYLRAMASAS 105

Query: 468 PT---VLPDERSD*RPPPPWSRLKRRG*TLAVGAS 373
            T   VLPDER+   PPP +    R G    V AS
Sbjct: 106 QTPSRVLPDERN---PPPGFPARPRVGAASRVPAS 137

>gb|AAH16681.1| KIAA1811 protein [Homo sapiens]
          Length = 473

 Score = 38.5 bits (88), Expect = 0.094
 Identities = 46/139 (33%), Positives = 60/139 (43%), Gaps = 30/139 (21%)
 Frame = +2

Query: 104 PRCE------RGLITRASKTISSPALGR--KQAPSRKAMRL-----TGGGG--LPSRR-- 232
           P CE      R  +    K + SP L R  K+ P RK+M +      GGGG  +P+RR  
Sbjct: 57  PSCEDQDLPPRNDVDPPRKRVDSPMLSRHGKRRPERKSMEVLSITDAGGGGSPVPTRRAL 116

Query: 233 -------RTTSQSGAATVTYSLRSALLSPAALWAFIGATIVVLLFSF------GVSLHGK 373
                  R+ S SGA+T   S  S L SP +            +FSF      G    G 
Sbjct: 117 EMAQHSQRSRSVSGASTGLSS--SPLSSPRSP-----------VFSFSPEPGAGDEARGG 163

Query: 374 DAPTAKVQPLRLRRLQGGG 430
            +PT+K Q L  R  +GGG
Sbjct: 164 GSPTSKTQTLPSRGPRGGG 182

>ref|NP_115806.1| KIAA1811 protein [Homo sapiens]
           gi|19401874|gb|AAL87698.1|AF479827_1 protein kinase-like
           protein [Homo sapiens]
          Length = 778

 Score = 38.5 bits (88), Expect = 0.094
 Identities = 46/139 (33%), Positives = 60/139 (43%), Gaps = 30/139 (21%)
 Frame = +2

Query: 104 PRCE------RGLITRASKTISSPALGR--KQAPSRKAMRL-----TGGGG--LPSRR-- 232
           P CE      R  +    K + SP L R  K+ P RK+M +      GGGG  +P+RR  
Sbjct: 362 PSCEDQDLPPRNDVDPPRKRVDSPMLSRHGKRRPERKSMEVLSITDAGGGGSPVPTRRAL 421

Query: 233 -------RTTSQSGAATVTYSLRSALLSPAALWAFIGATIVVLLFSF------GVSLHGK 373
                  R+ S SGA+T   S  S L SP +            +FSF      G    G 
Sbjct: 422 EMAQHSQRSRSVSGASTGLSS--SPLSSPRSP-----------VFSFSPEPGAGDEARGG 468

Query: 374 DAPTAKVQPLRLRRLQGGG 430
            +PT+K Q L  R  +GGG
Sbjct: 469 GSPTSKTQTLPSRGPRGGG 487

>emb|CAD38950.1| hypothetical protein [Homo sapiens]
          Length = 768

 Score = 38.5 bits (88), Expect = 0.094
 Identities = 46/139 (33%), Positives = 60/139 (43%), Gaps = 30/139 (21%)
 Frame = +2

Query: 104 PRCE------RGLITRASKTISSPALGR--KQAPSRKAMRL-----TGGGG--LPSRR-- 232
           P CE      R  +    K + SP L R  K+ P RK+M +      GGGG  +P+RR  
Sbjct: 328 PSCEDQDLPPRNDVDPPRKRVDSPMLSRHGKRRPERKSMEVLSITDAGGGGSPVPTRRAL 387

Query: 233 -------RTTSQSGAATVTYSLRSALLSPAALWAFIGATIVVLLFSF------GVSLHGK 373
                  R+ S SGA+T   S  S L SP +            +FSF      G    G 
Sbjct: 388 EMAQHSQRSRSVSGASTGLSS--SPLSSPRSP-----------VFSFSPEPGAGDEARGG 434

Query: 374 DAPTAKVQPLRLRRLQGGG 430
            +PT+K Q L  R  +GGG
Sbjct: 435 GSPTSKTQTLPSRGPRGGG 453

>sp|Q8TDC3|KI11_HUMAN Probable serine/threonine-protein kinase KIAA1811
           gi|19401871|gb|AAL87697.1|AF479826_1 putative
           serine/threonine protein kinase [Homo sapiens]
          Length = 794

 Score = 38.5 bits (88), Expect = 0.094
 Identities = 46/139 (33%), Positives = 60/139 (43%), Gaps = 30/139 (21%)
 Frame = +2

Query: 104 PRCE------RGLITRASKTISSPALGR--KQAPSRKAMRL-----TGGGG--LPSRR-- 232
           P CE      R  +    K + SP L R  K+ P RK+M +      GGGG  +P+RR  
Sbjct: 378 PSCEDQDLPPRNDVDPPRKRVDSPMLSRHGKRRPERKSMEVLSITDAGGGGSPVPTRRAL 437

Query: 233 -------RTTSQSGAATVTYSLRSALLSPAALWAFIGATIVVLLFSF------GVSLHGK 373
                  R+ S SGA+T   S  S L SP +            +FSF      G    G 
Sbjct: 438 EMAQHSQRSRSVSGASTGLSS--SPLSSPRSP-----------VFSFSPEPGAGDEARGG 484

Query: 374 DAPTAKVQPLRLRRLQGGG 430
            +PT+K Q L  R  +GGG
Sbjct: 485 GSPTSKTQTLPSRGPRGGG 503



EST assemble image


clone accession position
1 LCL025g02_r AV627368 1 385
2 HCL058g07_r AV642825 25 489
3 LCL034f08_r AV627970 27 379
4 MXL097a01_r BP098653 153 514
5 LCL041e07_r AV628422 323 679




Chlamydomonas reinhardtii
Kazusa DNA Research Institute