KCC002552A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC002552A_C01 KCC002552A_c01
tggcaatgcgcttccgcgtgctactgcgtgtagcaggagcagcaggaacaccgttgagct
cctacgtcttctgtgtgactCGCTACAGCTTATCAGCTGCCTGGCAGGAGTGGCAGGCCC
TCGCCGCCAAGTAGGCAGGGCAGGGCAGGAGGGCCCTGGCGCGCGCGTGTTCCCCGCGCA
GCGGCGGAGCGGCCTTGTGGGTTTAGGGAGATTGGTGTATTTGGAAGTGCAGCAATACTG
CCTCGCGCTTTGTTTGACACGTAAGAGTTATGACCGTGTTCGTTTGCGCTTTTGCGGTTG
CTGTCATGTAAAACGGCGTGCGGCAGGAACACAACCTATTTGTCAGTGCGTGTGCATACC
TCATACAAGTTGGAATGCAACGCACGTCGGGGGTTCGCTAGAGGTCTGTCTTCGGTTTGA
GGCCGGTTGAGGTCCACTAAGCAAGCATGCACGACATTATTATCGTTACACGAAGATGGC
GAATCCCTGAAGACAGTTGTTACCTGATGATACACCACAGTGTCTATCCCCTCCCCGTTG
ACGAGGATTGCCGTGTTTGTGTATGTGTGCGGGGCGTGTGGCGCGAGCCGCGAGGGCGCA
ACAGTGTTGGTGGAAGGGCAGCAGCATCGCGCCCGCAGCTGCACGGGCGACACGTGTTTG
CCCCCAGGTTTTTGAGGCACGATATAGGCTTGTTCCAACCCTCAACTGTTTGTTTGTTTA
TGCATTATTGTTGCATGGAGTAAGTGGCCTGGTCCTTCAATGACCGACAGAAGAAGCAAT
TTGAAGGCAGCGCGGCCAGTGGGGCCGGCCCTATGTGGGGCCATAGCAATCACAGCCGGT
GTCAAACACGGCTGATGGTGCCACGCCGGCTCTGCGGCGCGTGTG


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC002552A_C01 KCC002552A_c01
         (885 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

sp|Q9BXF3|CES2_HUMAN Cat eye syndrome critical region protein 2 ...    37  0.34
dbj|BAB21831.1| KIAA1740 protein [Homo sapiens]                        37  0.34
ref|XP_352402.1| similar to CECR2 protein [Homo sapiens]               37  0.34
ref|XP_320884.1| ENSANGP00000019179 [Anopheles gambiae] gi|21288...    36  0.98
ref|XP_329499.1| predicted protein [Neurospora crassa] gi|289249...    35  1.3

>sp|Q9BXF3|CES2_HUMAN Cat eye syndrome critical region protein 2
            gi|13183793|gb|AAK15343.1|AF336133_1 CECR2 protein [Homo
            sapiens]
          Length = 1484

 Score = 37.4 bits (85), Expect = 0.34
 Identities = 34/108 (31%), Positives = 47/108 (43%), Gaps = 6/108 (5%)
 Frame = -2

Query: 869  PAWHHQP-CLTPAVIAMAPHRAG---PTGRAAFKLLLLSVIEGPGHLLHATIMHKQTNS* 702
            PA H QP   +  V A+ PH  G   P G +    +     EG GH   A +M +     
Sbjct: 1374 PASHFQPRAYSSPVAALPPHHPGATQPNGLSQEGPIYRCQEEGLGHF-QAVMMEQIGTRS 1432

Query: 701  GLEQAYIVPQKPGGKHVSPVQLRARCCCPSTNTVAPSR--LAPHAPHT 564
            G+   +    +P G  + PVQ +A    P T T A S+  + PH P T
Sbjct: 1433 GIRGPFQEMYRPSGMQMHPVQSQA--SFPKTPTAATSQEEVPPHKPPT 1478

>dbj|BAB21831.1| KIAA1740 protein [Homo sapiens]
          Length = 1119

 Score = 37.4 bits (85), Expect = 0.34
 Identities = 34/108 (31%), Positives = 47/108 (43%), Gaps = 6/108 (5%)
 Frame = -2

Query: 869  PAWHHQP-CLTPAVIAMAPHRAG---PTGRAAFKLLLLSVIEGPGHLLHATIMHKQTNS* 702
            PA H QP   +  V A+ PH  G   P G +    +     EG GH   A +M +     
Sbjct: 1009 PASHFQPRAYSSPVAALPPHHPGATQPNGLSQEGPIYRCQEEGLGHF-QAVMMEQIGTRS 1067

Query: 701  GLEQAYIVPQKPGGKHVSPVQLRARCCCPSTNTVAPSR--LAPHAPHT 564
            G+   +    +P G  + PVQ +A    P T T A S+  + PH P T
Sbjct: 1068 GIRGPFQEMYRPSGMQMHPVQSQA--SFPKTPTAATSQEEVPPHKPPT 1113

>ref|XP_352402.1| similar to CECR2 protein [Homo sapiens]
          Length = 1437

 Score = 37.4 bits (85), Expect = 0.34
 Identities = 34/108 (31%), Positives = 47/108 (43%), Gaps = 6/108 (5%)
 Frame = -2

Query: 869  PAWHHQP-CLTPAVIAMAPHRAG---PTGRAAFKLLLLSVIEGPGHLLHATIMHKQTNS* 702
            PA H QP   +  V A+ PH  G   P G +    +     EG GH   A +M +     
Sbjct: 1311 PASHFQPRAYSSPVAALPPHHPGATQPNGLSQEGPIYRCQEEGLGHF-QAVMMEQIGTRS 1369

Query: 701  GLEQAYIVPQKPGGKHVSPVQLRARCCCPSTNTVAPSR--LAPHAPHT 564
            G+   +    +P G  + PVQ +A    P T T A S+  + PH P T
Sbjct: 1370 GIRGPFQEMYRPSGMQMHPVQSQA--SFPKTPTAATSQEEVPPHKPPT 1415

>ref|XP_320884.1| ENSANGP00000019179 [Anopheles gambiae] gi|21288302|gb|EAA00623.1|
           ENSANGP00000019179 [Anopheles gambiae str. PEST]
          Length = 1348

 Score = 35.8 bits (81), Expect = 0.98
 Identities = 20/61 (32%), Positives = 27/61 (43%)
 Frame = -2

Query: 281 EHGHNSYVSNKARGSIAALPNTPISLNPQGRSAAARGTRARQGPPALPCLLGGEGLPLLP 102
           E G+      K  G +      P ++ P+G+    RG R  +GP  LP   G  GLP  P
Sbjct: 322 ERGYKGEAGIKGEGGVPGPRGLPGAVGPEGK----RGKRGMKGPTGLPGSQGERGLPGSP 377

Query: 101 G 99
           G
Sbjct: 378 G 378

>ref|XP_329499.1| predicted protein [Neurospora crassa] gi|28924971|gb|EAA34060.1|
           predicted protein [Neurospora crassa]
          Length = 294

 Score = 35.4 bits (80), Expect = 1.3
 Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 7/62 (11%)
 Frame = -3

Query: 691 KPISCLKNLGANTCRPCSCGRDAAALPPTLLRPRGSRHTP-------RTHTQTRQSSSTG 533
           +P   L  +GAN   P   GRD +A   +LL  +G  H P        TH+Q++  +  G
Sbjct: 117 RPDDSLSQVGANRSHPRGRGRDLSARELSLLHAQGGSHAPTVVSLASSTHSQSQSQTQGG 176

Query: 532 RG 527
            G
Sbjct: 177 GG 178



EST assemble image


clone accession position
1 HCL071e11_r AV643551 1 485
2 HCL068h08_r AV643396 286 746
3 HCL056f02_r AV642716 347 885




Chlamydomonas reinhardtii
Kazusa DNA Research Institute