Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC002548A_C01 KCC002548A_c01
(998 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAN05382.1| hypothetical protein [Oryza sativa (japonica cult... 52 1e-05
pir||S22697 extensin - Volvox carteri (fragment) gi|21992|emb|CA... 49 1e-04
gb|AAQ73927.1| erythrocyte membrane protein 1 [Plasmodium falcip... 47 4e-04
ref|XP_197869.1| hypothetical protein XP_197869 [Mus musculus] 47 4e-04
gb|AAK13122.1|AC080019_14 Polyprotein [Oryza sativa] gi|31431781... 47 5e-04
>gb|AAN05382.1| hypothetical protein [Oryza sativa (japonica cultivar-group)]
Length = 315
Score = 52.4 bits (124), Expect = 1e-05
Identities = 31/63 (49%), Positives = 34/63 (53%), Gaps = 8/63 (12%)
Frame = +3
Query: 276 GAGRAGASEDRDGGR--------AGGGRRGRRRRGGRRRRPGAGRA**GPRRGVI*GGGD 431
G G AGA ED +GG AG G R RR+RGG RRRP A G G + GGG
Sbjct: 70 GGGGAGAVEDDEGGTGAVEGGSGAGAGGRRRRQRGGGRRRPDAVNGGDGGNAGAVEGGGG 129
Query: 432 PTR 440
PTR
Sbjct: 130 PTR 132
>pir||S22697 extensin - Volvox carteri (fragment) gi|21992|emb|CAA46283.1|
extensin [Volvox carteri]
Length = 464
Score = 48.9 bits (115), Expect = 1e-04
Identities = 29/70 (41%), Positives = 35/70 (49%), Gaps = 5/70 (7%)
Frame = -2
Query: 469 STPPGTGRVPR-----VGSPPPHITPRLGPHQARPAPGLRRRPPRRRRPRRPPPARPPSR 305
++PP RVP V SPPP PR+ P P P PP P RP P+ PP R
Sbjct: 270 TSPPPPPRVPPSPPPPVASPPPPPPPRVSPSPPPPQPVSSPPPP---PPPRPSPSPPPPR 326
Query: 304 SSEAPARPAP 275
SS +P P+P
Sbjct: 327 SSPSPPPPSP 336
Score = 42.4 bits (98), Expect = 0.013
Identities = 24/64 (37%), Positives = 31/64 (47%)
Frame = -2
Query: 472 VSTPPGTGRVPRVGSPPPHITPRLGPHQARPAPGLRRRPPRRRRPRRPPPARPPSRSSEA 293
VS+PP PPP +P P ++ P+P PP P RP P+ PP RSS +
Sbjct: 307 VSSPPPP--------PPPRPSPSPPPPRSSPSPPPPSPPPPSPPPPRPSPSPPPPRSSPS 358
Query: 292 PARP 281
P P
Sbjct: 359 PPPP 362
Score = 39.3 bits (90), Expect = 0.11
Identities = 25/66 (37%), Positives = 32/66 (47%), Gaps = 3/66 (4%)
Frame = -2
Query: 463 PPGTGRVPRVGSPPPHITPRLGPHQAR--PAPGLRRRPPRRRRPRRPPPARPPSRSSEA- 293
PP + P PPP ++P P +A P P PP R P PPP+ PP ++ A
Sbjct: 352 PPRSSPSP----PPPVVSPPPPPPRASPPPPPASSPPPPPRPPPPSPPPSPPPPATAAAN 407
Query: 292 PARPAP 275
P PAP
Sbjct: 408 PPSPAP 413
Score = 38.5 bits (88), Expect = 0.18
Identities = 28/70 (40%), Positives = 31/70 (44%), Gaps = 4/70 (5%)
Frame = -2
Query: 469 STPPGTGRVP--RVGSPPPHIT--PRLGPHQARPAPGLRRRPPRRRRPRRPPPARPPSRS 302
S PP T P R+ SP P +T P L P P R PP P PP PP R
Sbjct: 241 SPPPATRSPPPRRITSPSPVLTASPPLPKTSPPPPP---RVPPSPPPPVASPPPPPPPRV 297
Query: 301 SEAPARPAPV 272
S +P P PV
Sbjct: 298 SPSPPPPQPV 307
Score = 37.7 bits (86), Expect = 0.31
Identities = 24/68 (35%), Positives = 27/68 (39%), Gaps = 5/68 (7%)
Frame = -2
Query: 463 PPGTGRVPRVGSPPPHITPRLGPHQARPAPGLRRRPPRRRRPRRPPPAR-----PPSRSS 299
PP + P SPPP P P + P P PP PPP R PP+ S
Sbjct: 324 PPRSSPSPPPPSPPPPSPPPPRPSPSPPPPRSSPSPPPPVVSPPPPPPRASPPPPPASSP 383
Query: 298 EAPARPAP 275
P RP P
Sbjct: 384 PPPPRPPP 391
Score = 36.6 bits (83), Expect = 0.69
Identities = 22/65 (33%), Positives = 28/65 (42%)
Frame = -2
Query: 469 STPPGTGRVPRVGSPPPHITPRLGPHQARPAPGLRRRPPRRRRPRRPPPARPPSRSSEAP 290
++PP +P+ PPP PR+ P P PP R P PPP S P
Sbjct: 263 ASPP----LPKTSPPPP---PRVPPSPPPPVASPPPPPPPRVSPSPPPPQPVSSPPPPPP 315
Query: 289 ARPAP 275
RP+P
Sbjct: 316 PRPSP 320
Score = 36.2 bits (82), Expect = 0.90
Identities = 23/67 (34%), Positives = 26/67 (38%), Gaps = 2/67 (2%)
Frame = -2
Query: 469 STPPGTGRVPRVGS--PPPHITPRLGPHQARPAPGLRRRPPRRRRPRRPPPARPPSRSSE 296
S PP + PR PPP +P P P P PP R P PP + PP
Sbjct: 335 SPPPPSPPPPRPSPSPPPPRSSPSPPPPVVSPPP-----PPPRASPPPPPASSPPPPPRP 389
Query: 295 APARPAP 275
P P P
Sbjct: 390 PPPSPPP 396
Score = 33.1 bits (74), Expect = 7.7
Identities = 24/71 (33%), Positives = 27/71 (37%), Gaps = 6/71 (8%)
Frame = -2
Query: 469 STPPGTGRVPRVG---SPPPHITPRLGPHQARPAPGLRRRPPRRRRPRRPPP---ARPPS 308
S+PP R P SPPP T P P+ PP RP PPP A PP
Sbjct: 381 SSPPPPPRPPPPSPPPSPPPPATAAANPPSPAPSRSRAGGPPLGTRPPPPPPEDDAPPPD 440
Query: 307 RSSEAPARPAP 275
P +P
Sbjct: 441 YYFPPPQDMSP 451
>gb|AAQ73927.1| erythrocyte membrane protein 1 [Plasmodium falciparum]
Length = 2322
Score = 47.4 bits (111), Expect = 4e-04
Identities = 28/65 (43%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Frame = -2
Query: 469 STPPGTGRVPRVGSPPPHITPRLGPHQARPAPGLRRRPPRRRRP-RRPPPARPPSRSSEA 293
S PP R P PPP P P +RP P R PP R P RPPP PP +
Sbjct: 1677 SRPPPPSRPPPPSRPPPPSRP---PPPSRPPPPSRPPPPSRPPPPSRPPPPPPPPPAPRP 1733
Query: 292 PARPA 278
PA PA
Sbjct: 1734 PAEPA 1738
Score = 45.1 bits (105), Expect = 0.002
Identities = 29/67 (43%), Positives = 31/67 (45%), Gaps = 2/67 (2%)
Frame = -2
Query: 469 STPPGTGRVPRVGSPPPHITPRLGPHQARPAPGLRRRPPRRRRP-RRPPP-ARPPSRSSE 296
S PP R P PPP P P +RP P R PP R P RPPP +RPP S
Sbjct: 1665 SRPPPPSRPPPPSRPPPPSRP---PPPSRPPPPSRPPPPSRPPPPSRPPPPSRPPPPSRP 1721
Query: 295 APARPAP 275
P P P
Sbjct: 1722 PPPPPPP 1728
Score = 41.6 bits (96), Expect = 0.022
Identities = 28/68 (41%), Positives = 30/68 (43%), Gaps = 3/68 (4%)
Frame = -2
Query: 469 STPPGTGRVPRVGSPPPHITPRLGPHQARPAPGLRRRPPRRRRP---RRPPPARPPSRSS 299
S PP R P PPP P P +RP P R PP R P R PPP+RPP
Sbjct: 1671 SRPPPPSRPPPPSRPPPPSRP---PPPSRPPPP-SRPPPPSRPPPPSRPPPPSRPPPPPP 1726
Query: 298 EAPARPAP 275
PA P
Sbjct: 1727 PPPAPRPP 1734
Score = 40.0 bits (92), Expect = 0.063
Identities = 25/62 (40%), Positives = 27/62 (43%), Gaps = 5/62 (8%)
Frame = -2
Query: 469 STPPGTGRVPRVGSPPPHITPRLGPHQARPAPGLRRRPPRRRRPRRPPPARP-----PSR 305
S PP R P PPP P P +RP P R PP R P PPP P P+R
Sbjct: 1683 SRPPPPSRPPPPSRPPPPSRP---PPPSRPPPPSRPPPPSRPPPPPPPPPAPRPPAEPAR 1739
Query: 304 SS 299
S
Sbjct: 1740 DS 1741
Score = 38.9 bits (89), Expect = 0.14
Identities = 23/52 (44%), Positives = 26/52 (49%), Gaps = 3/52 (5%)
Frame = -2
Query: 421 PHITPRLGPHQARPAPGLRRRPPRRRRP--RRPPPARPPSRS-SEAPARPAP 275
P P P +RP P R PP R P R PPP+RPP S P+RP P
Sbjct: 1660 PQPPPSRPPPPSRPPPPSRPPPPSRPPPPSRPPPPSRPPPPSRPPPPSRPPP 1711
Score = 37.4 bits (85), Expect = 0.41
Identities = 26/59 (44%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Frame = -2
Query: 442 PRVGSPPPHITPRLGPHQARPAPGLRRRPPRRRRP-RRPPP-ARPPSRS-SEAPARPAP 275
P PPP P P +RP P R PP R P RPPP +RPP S P+RP P
Sbjct: 1662 PPPSRPPPPSRP---PPPSRPPPPSRPPPPSRPPPPSRPPPPSRPPPPSRPPPPSRPPP 1717
Score = 35.0 bits (79), Expect = 2.0
Identities = 23/78 (29%), Positives = 33/78 (41%), Gaps = 3/78 (3%)
Frame = -2
Query: 499 CMNKNAQSWVSTPPGTGRVPRVGSPPPHITPRLGPHQARPAPGLRRRPPRRRRP--RRPP 326
CM + ++ T + + P + + +A P R PP R P R PP
Sbjct: 1622 CMKEPSKETKKPSDNTDMPASLDNEPEEVKAKCTCQKAPQPPPSRPPPPSRPPPPSRPPP 1681
Query: 325 PARPPSRS-SEAPARPAP 275
P+RPP S P+RP P
Sbjct: 1682 PSRPPPPSRPPPPSRPPP 1699
Score = 33.5 bits (75), Expect = 5.9
Identities = 12/18 (66%), Positives = 12/18 (66%)
Frame = -1
Query: 377 PRSSPPPSSPPPPAPPAP 324
P PPPS PPPP PP P
Sbjct: 1712 PSRPPPPSRPPPPPPPPP 1729
>ref|XP_197869.1| hypothetical protein XP_197869 [Mus musculus]
Length = 899
Score = 47.4 bits (111), Expect = 4e-04
Identities = 31/74 (41%), Positives = 33/74 (43%), Gaps = 4/74 (5%)
Frame = -2
Query: 481 QSWVSTPPGTGRVPRVGSPPPHITPRLGPHQARPAPGLRRRPPRRRRPRRPPPARP---- 314
+S P G G P SP P TP L P R A G P R R PRRPP R
Sbjct: 76 ESLQQLPLGQGAQPGSRSPQPKETPPLRPIPTRAARGGAGAPDRIRPPRRPPTTRRAALL 135
Query: 313 PSRSSEAPARPAPV 272
PS + E RP PV
Sbjct: 136 PSAAGEGGPRPGPV 149
>gb|AAK13122.1|AC080019_14 Polyprotein [Oryza sativa] gi|31431781|gb|AAP53507.1| putative
polyprotein [Oryza sativa (japonica cultivar-group)]
Length = 2017
Score = 47.0 bits (110), Expect = 5e-04
Identities = 26/51 (50%), Positives = 29/51 (55%), Gaps = 5/51 (9%)
Frame = -2
Query: 439 RVGSPPPHITPRLG---PHQARPAPGLRRRPPRRRRPRRPPPAR--PPSRS 302
R G PP +P G P ++RP RRPP RRRPRRP P R PP RS
Sbjct: 66 RPGPPPVSASPSSGSPRPRRSRPPLRFARRPPERRRPRRPEPRRRLPPLRS 116
