Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC002546A_C01 KCC002546A_c01
(513 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_056645.1| small optic lobes homolog [Mus musculus] gi|745... 40 0.017
gb|AAH58094.1| Solh protein [Mus musculus] 40 0.017
ref|XP_239171.2| similar to Solh protein [Rattus norvegicus] 39 0.030
ref|NP_005623.1| small optic lobes homolog; Small optic lobes, d... 37 0.19
gb|AAH12964.1| Ribosomal protein S6 kinase, polypeptide 4 [Mus m... 35 0.56
>ref|NP_056645.1| small optic lobes homolog [Mus musculus]
gi|7453540|gb|AAF62871.1|AF180445_1 Solh protein [Mus
musculus]
Length = 1095
Score = 40.0 bits (92), Expect = 0.017
Identities = 35/95 (36%), Positives = 43/95 (44%)
Frame = +2
Query: 47 PCTSYCS**KGPRKKGLP*TPSSRLVVPRVVRYPGGSHWRVSPSLLLHNSSNTICFGMGA 226
P S CS GPRK LP P LVVP VV P G H +P S + G
Sbjct: 164 PVASSCSACGGPRKLSLPRIPPEALVVPEVVA-PTGFHVVPAP-------SQPVLPG--- 212
Query: 227 RSGQGPSGAEADADSITQLPATRSPQSPPHRTVYN 331
GAEAD+ S +Q P T + Q PP +++
Sbjct: 213 ------EGAEADSPSTSQGP-TSTDQEPPRVPLFS 240
>gb|AAH58094.1| Solh protein [Mus musculus]
Length = 1072
Score = 40.0 bits (92), Expect = 0.017
Identities = 35/95 (36%), Positives = 43/95 (44%)
Frame = +2
Query: 47 PCTSYCS**KGPRKKGLP*TPSSRLVVPRVVRYPGGSHWRVSPSLLLHNSSNTICFGMGA 226
P S CS GPRK LP P LVVP VV P G H +P S + G
Sbjct: 164 PVASSCSACGGPRKLSLPRIPPEALVVPEVVA-PTGFHVVPAP-------SQPVLPG--- 212
Query: 227 RSGQGPSGAEADADSITQLPATRSPQSPPHRTVYN 331
GAEAD+ S +Q P T + Q PP +++
Sbjct: 213 ------EGAEADSPSTSQGP-TSTDQEPPRVPLFS 240
>ref|XP_239171.2| similar to Solh protein [Rattus norvegicus]
Length = 887
Score = 39.3 bits (90), Expect = 0.030
Identities = 35/95 (36%), Positives = 43/95 (44%)
Frame = +2
Query: 47 PCTSYCS**KGPRKKGLP*TPSSRLVVPRVVRYPGGSHWRVSPSLLLHNSSNTICFGMGA 226
P S CS GPRK LP P LVVP VV P G H PS A
Sbjct: 156 PVASSCSACGGPRKLSLPRIPPEALVVPEVVA-PTGFHVVPPPS-------------QPA 201
Query: 227 RSGQGPSGAEADADSITQLPATRSPQSPPHRTVYN 331
G+ GAEA++ S +Q P T + Q PP +++
Sbjct: 202 LPGE---GAEAESPSTSQGP-TSTDQEPPRVPLFS 232
>ref|NP_005623.1| small optic lobes homolog; Small optic lobes, drosophila, homolog
of [Homo sapiens] gi|3462351|gb|AAC33822.1| small optic
lobes homolog [Homo sapiens] gi|10944269|emb|CAC14067.1|
c366D1.1 (small optic lobes (Drosophila) homolog) [Homo
sapiens] gi|14336701|gb|AAK61233.1|AE006464_1 small
optic lobes homolog [Homo sapiens]
Length = 1086
Score = 36.6 bits (83), Expect = 0.19
Identities = 36/128 (28%), Positives = 49/128 (38%), Gaps = 2/128 (1%)
Frame = +2
Query: 47 PCTSYCS**KGPRKKGLP*TPSSRLVVPRVVRYPGGSHWRVSPSLLLHNSSNTICFGMGA 226
P S CS GPR+ LP P LVVP VV P G H V P+
Sbjct: 158 PVASSCSVCGGPRRLSLPRIPPEALVVPEVVA-PAGFH--VVPA--------------AP 200
Query: 227 RSGQGPSGAEADADSITQLPAT--RSPQSPPHRTVYNSNARSPTSCTETSHSHLSLRPIA 400
G GAEA+ + +Q PA P+ PP ++ +P + P+
Sbjct: 201 PPGLPGEGAEANPPATSQGPAAEPEPPRVPPFSPFSSTLQNNPVPRSRREVPPQLQPPVP 260
Query: 401 SKVYPTPN 424
P+P+
Sbjct: 261 EAAQPSPS 268
>gb|AAH12964.1| Ribosomal protein S6 kinase, polypeptide 4 [Mus musculus]
Length = 773
Score = 35.0 bits (79), Expect = 0.56
Identities = 17/42 (40%), Positives = 24/42 (56%)
Frame = +1
Query: 82 AEEGAPVDPIQPPGGTPSCEIPRWFSLAGFSFTSPSQFLQHH 207
AEE ++P+ PP G+P PR F G+SF +PS H+
Sbjct: 332 AEEFTRLEPVYPPAGSPPPGDPRIFQ--GYSFVAPSILFDHN 371
