Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC002541A_C01 KCC002541A_c01
(524 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|ZP_00098483.1| COG0653: Preprotein translocase subunit SecA ... 51 1e-05
ref|NP_924782.1| preprotein translocase subunit [Gloeobacter vio... 50 2e-05
emb|CAA12257.1| preprotein translocase [Phormidium laminosum] 47 1e-04
ref|NP_903951.1| preprotein translocase secA subunit [Chromobact... 44 0.001
ref|NP_386733.1| PROBABLE PREPROTEIN TRANSLOCASE SECA SUBUNIT [S... 44 0.002
>ref|ZP_00098483.1| COG0653: Preprotein translocase subunit SecA (ATPase, RNA helicase)
[Desulfitobacterium hafniense]
Length = 840
Score = 50.8 bits (120), Expect = 1e-05
Identities = 26/50 (52%), Positives = 34/50 (68%)
Frame = +2
Query: 374 VEAFFNKLFKTDPSAGTRNKYQSRVDQVNALEPAMQALSDDQLRAKTTEF 523
+ F NKLF D +A KYQ ++ +N LEP ++ALSD+QLRAKT EF
Sbjct: 6 IMGFLNKLF--DDNAREVKKYQKKIAAINDLEPEIKALSDEQLRAKTDEF 53
>ref|NP_924782.1| preprotein translocase subunit [Gloeobacter violaceus]
gi|35212402|dbj|BAC89777.1| preprotein translocase
subunit [Gloeobacter violaceus]
Length = 952
Score = 50.1 bits (118), Expect = 2e-05
Identities = 28/48 (58%), Positives = 33/48 (68%)
Frame = +2
Query: 380 AFFNKLFKTDPSAGTRNKYQSRVDQVNALEPAMQALSDDQLRAKTTEF 523
A++NKLF DP KYQ RV ++NALE + ALSDDQLRAKT F
Sbjct: 2 AWWNKLFG-DPQERKVKKYQPRVAEMNALEAEVAALSDDQLRAKTAVF 48
>emb|CAA12257.1| preprotein translocase [Phormidium laminosum]
Length = 582
Score = 47.0 bits (110), Expect = 1e-04
Identities = 21/39 (53%), Positives = 27/39 (68%)
Frame = +2
Query: 407 DPSAGTRNKYQSRVDQVNALEPAMQALSDDQLRAKTTEF 523
DP+A KYQ + ++N LEP M+ LSDD+LR KT EF
Sbjct: 8 DPNARKLKKYQPDLAEINLLEPEMEVLSDDELRGKTAEF 46
>ref|NP_903951.1| preprotein translocase secA subunit [Chromobacterium violaceum ATCC
12472] gi|34332909|gb|AAQ61941.2| preprotein translocase
secA subunit [Chromobacterium violaceum ATCC 12472]
Length = 903
Score = 43.9 bits (102), Expect = 0.001
Identities = 23/40 (57%), Positives = 29/40 (72%), Gaps = 5/40 (12%)
Frame = +2
Query: 419 GTRN-----KYQSRVDQVNALEPAMQALSDDQLRAKTTEF 523
G+RN +Y+ V ++NALEPAMQALSD+ L AKT EF
Sbjct: 11 GSRNDRLLKQYRQTVARINALEPAMQALSDEALAAKTQEF 50
>ref|NP_386733.1| PROBABLE PREPROTEIN TRANSLOCASE SECA SUBUNIT [Sinorhizobium
meliloti] gi|15075651|emb|CAC47206.1| PROBABLE
PREPROTEIN TRANSLOCASE SECA SUBUNIT [Sinorhizobium
meliloti]
Length = 903
Score = 43.5 bits (101), Expect = 0.002
Identities = 25/52 (48%), Positives = 31/52 (59%)
Frame = +2
Query: 368 VRVEAFFNKLFKTDPSAGTRNKYQSRVDQVNALEPAMQALSDDQLRAKTTEF 523
V + F KLF + R Y+ RVD +NALE M+ALSD+ L AKT EF
Sbjct: 2 VSLGGFARKLFGSANDRRVRG-YKGRVDAINALEAEMKALSDEALAAKTAEF 52
