Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC002536A_C01 KCC002536A_c01
(498 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAB19202.1| ataxin-2 [Mus musculus] 39 0.035
ref|NP_033151.1| spinocerebellar ataxia 2 homolog; ataxin 2; spi... 39 0.035
ref|NP_723274.1| CG5261-PA [Drosophila melanogaster] gi|7297251|... 36 0.23
ref|NP_609118.1| CG5261-PB [Drosophila melanogaster] gi|7297250|... 36 0.23
ref|ZP_00052609.1| COG2030: Acyl dehydratase [Magnetospirillum m... 36 0.30
>gb|AAB19202.1| ataxin-2 [Mus musculus]
Length = 419
Score = 38.9 bits (89), Expect = 0.035
Identities = 20/40 (50%), Positives = 23/40 (57%)
Frame = -3
Query: 292 PYAAPASGAYVLVVWVPSPDAAGATGGLAAGGAEPGMGLG 173
P AAPAS A VP+P A A+ AAGG PG+G G
Sbjct: 32 PGAAPASAAVTSASVVPAPAAPVASSSAAAGGGRPGLGRG 71
>ref|NP_033151.1| spinocerebellar ataxia 2 homolog; ataxin 2; spinocerebellar ataxia
2 (olivopontocerebellar ataxia 2, autosomal dominant,
ataxin 2) [Mus musculus] gi|7513601|pir||T14171 ataxin-2
- mouse gi|3005020|gb|AAC09275.1| ataxin-2 [Mus
musculus]
Length = 1285
Score = 38.9 bits (89), Expect = 0.035
Identities = 20/40 (50%), Positives = 23/40 (57%)
Frame = -3
Query: 292 PYAAPASGAYVLVVWVPSPDAAGATGGLAAGGAEPGMGLG 173
P AAPAS A VP+P A A+ AAGG PG+G G
Sbjct: 176 PGAAPASAAVTSASVVPAPAAPVASSSAAAGGGRPGLGRG 215
>ref|NP_723274.1| CG5261-PA [Drosophila melanogaster] gi|7297251|gb|AAF52515.1|
CG5261-PA [Drosophila melanogaster]
Length = 421
Score = 36.2 bits (82), Expect = 0.23
Identities = 19/36 (52%), Positives = 22/36 (60%), Gaps = 1/36 (2%)
Frame = +3
Query: 174 PKPIPGSAPPAARPPVAPAASGLGTHTTRTYA-PLA 278
P P P +AP AA PP APAA+ T R YA P+A
Sbjct: 105 PPPPPAAAPAAAAPPPAPAAAPAAAGTGRVYASPMA 140
>ref|NP_609118.1| CG5261-PB [Drosophila melanogaster] gi|7297250|gb|AAF52514.1|
CG5261-PB [Drosophila melanogaster]
Length = 512
Score = 36.2 bits (82), Expect = 0.23
Identities = 19/36 (52%), Positives = 22/36 (60%), Gaps = 1/36 (2%)
Frame = +3
Query: 174 PKPIPGSAPPAARPPVAPAASGLGTHTTRTYA-PLA 278
P P P +AP AA PP APAA+ T R YA P+A
Sbjct: 196 PPPPPAAAPAAAAPPPAPAAAPAAAGTGRVYASPMA 231
>ref|ZP_00052609.1| COG2030: Acyl dehydratase [Magnetospirillum magnetotacticum]
Length = 172
Score = 35.8 bits (81), Expect = 0.30
Identities = 18/43 (41%), Positives = 21/43 (47%)
Frame = +3
Query: 174 PKPIPGSAPPAARPPVAPAASGLGTHTTRTYAPLAGAAYGIHT 302
P P PPA PP+ A LG T R YA ++G IHT
Sbjct: 21 PAPADADGPPAFVPPLPTARWALGAGTGRAYAAVSGDRNPIHT 63
