Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC002533A_C01 KCC002533A_c01
(538 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_215092.1| PE_PGRS [Mycobacterium tuberculosis H37Rv] gi|7... 44 3e-08
ref|NP_854253.1| PE-PGRS FAMILY PROTEIN [Mycobacterium bovis sub... 44 3e-08
ref|NP_335016.1| PE_PGRS family protein [Mycobacterium tuberculo... 44 3e-08
ref|NP_825588.1| putative GntR-family transcriptional regulator ... 53 2e-07
ref|NP_039875.1| nuclear antigen EBNA1 [Human herpesvirus 4] gi|... 50 1e-06
>ref|NP_215092.1| PE_PGRS [Mycobacterium tuberculosis H37Rv] gi|7476123|pir||A70934
hypothetical glycine-rich protein Rv0578c -
Mycobacterium tuberculosis (strain H37RV)
gi|2909637|emb|CAA17449.1| PE_PGRS [Mycobacterium
tuberculosis H37Rv]
Length = 1306
Score = 44.3 bits (103), Expect(2) = 3e-08
Identities = 33/96 (34%), Positives = 39/96 (40%), Gaps = 5/96 (5%)
Frame = +1
Query: 28 GAGRATGRHRLPGVA-RHGAEHGGGRRVRGRHPHAHGHARVVVQGHHQCATGVQG*GG-- 198
G G G H L G+ HGA GG G P G+ GH+ A G G GG
Sbjct: 315 GVGGPGGGHGLLGLGGSHGAGGAGGSGGDGGAPGDGGNGATGTWGHNLGAGGTGGNGGNP 374
Query: 199 --GGAYGA*AGQGAGARRQRAGVPGLPAPGAGGGGE 300
GGA GA G+ G PG + G GG+
Sbjct: 375 GAGGAGGAGGASVGGSAHGANGAPGTTSTSGGNGGD 410
Score = 34.7 bits (78), Expect(2) = 3e-08
Identities = 18/51 (35%), Positives = 25/51 (48%)
Frame = +2
Query: 332 DAISSDESPSIGNLNPDGSSIGPDAMGASRGADGGSSVKDGSKGPEGNGGA 484
DAISS ++ + G DG +G G + G G + GS+ P GGA
Sbjct: 416 DAISSGQTGANGGRGGDGGQVGNGGAGGAGGRGGAGGLGFGSEAPGRPGGA 466
Score = 34.3 bits (77), Expect(2) = 0.008
Identities = 30/91 (32%), Positives = 30/91 (32%)
Frame = +1
Query: 22 WAGAGRATGRHRLPGVARHGAEHGGGRRVRGRHPHAHGHARVVVQGHHQCATGVQG*GGG 201
WAG G G GV G G V G A GH G G GG
Sbjct: 693 WAGNGGTGGAGGTGGVGGTGGSGSDG--VNGSSAGADGHPG-----------GTGGVGGT 739
Query: 202 GAYGA*AGQGAGARRQRAGVPGLPAPGAGGG 294
G G G G A GV G PG GG
Sbjct: 740 GGKGGDGGDGGAAPN---GVAGSQGPGGAGG 767
Score = 33.9 bits (76), Expect(2) = 0.010
Identities = 35/110 (31%), Positives = 42/110 (37%), Gaps = 18/110 (16%)
Frame = +1
Query: 28 GAGRATGRHRLPGVARHGAEHGGGRRVRGRHPHAHGHARVVVQGHHQCATGVQG*GGGGA 207
G G+A G PG +G GG G+ A G A ++ G + A GV GG G
Sbjct: 124 GTGQAGG----PGGILYGNGGNGGSGAPGQRGGAGGAAGLIGNGGNGGAGGVGTTGGAGG 179
Query: 208 YGA*AG-----------QGAGARRQRAGVPGLP-------APGAGGGGEA 303
+G G GAGA G G A GAGG G A
Sbjct: 180 HGGAGGWLYGNGGAGGFGGAGAVGGNGGAGGTAGLFGVGGAGGAGGNGIA 229
Score = 33.1 bits (74), Expect(2) = 0.006
Identities = 31/103 (30%), Positives = 35/103 (33%), Gaps = 9/103 (8%)
Frame = +1
Query: 28 GAGRATGRHRLPGVA--------RHGAEHGGGRRVRGRHPHAHGHARVVVQGHHQCATGV 183
G G A G G+A GA GG G P GH G + G
Sbjct: 524 GPGGAGGEGGAGGLALAASGQNGSQGAGGDGGAGGNGGTPGNGGHGAAGALGVNGGVGGA 583
Query: 184 QG*GGGGAYGA*AGQ-GAGARRQRAGVPGLPAPGAGGGGEAVR 309
G GG G GQ G+G+ G PG G GG R
Sbjct: 584 GGHGGDPGVGGAGGQGGSGSTPGANGAPGNTPTSGGNGGNGGR 626
Score = 32.3 bits (72), Expect(2) = 0.028
Identities = 27/90 (30%), Positives = 33/90 (36%)
Frame = +1
Query: 28 GAGRATGRHRLPGVARHGAEHGGGRRVRGRHPHAHGHARVVVQGHHQCATGVQG*GGGGA 207
G+G G + PG +GG GR A G + G G+ G GG G
Sbjct: 600 GSGSTPGANGAPGNTPTSGGNGGNG---GRGADATGFGQTGASGGRGGDGGLVGNGGAGG 656
Query: 208 YGA*AGQGAGARRQRAGVPGLPAPGAGGGG 297
G +G R G PGL G GG
Sbjct: 657 AGGNGSKGLPG-LGRLGNPGLDGGTGGNGG 685
Score = 32.3 bits (72), Expect(2) = 0.003
Identities = 34/106 (32%), Positives = 38/106 (35%), Gaps = 13/106 (12%)
Frame = +1
Query: 25 AGAGRATGRHRL----PGVARHGAEHGGGRRVRGRHPHAHGHARVVVQGHHQCA------ 174
AG A+G H G A +GG G GH + + G H
Sbjct: 282 AGGAGASGAHATNLGADGQAGGNGGNGGAGGTGGVGGPGGGHGLLGLGGSHGAGGAGGSG 341
Query: 175 --TGVQG*GGGGAYGA*A-GQGAGARRQRAGVPGLPAPGAGGGGEA 303
G G GG GA G GAG G PG A GAGG G A
Sbjct: 342 GDGGAPGDGGNGATGTWGHNLGAGGTGGNGGNPG--AGGAGGAGGA 385
Score = 30.0 bits (66), Expect(2) = 0.21
Identities = 16/43 (37%), Positives = 17/43 (39%)
Frame = +1
Query: 178 GVQG*GGGGAYGA*AGQGAGARRQRAGVPGLPAPGAGGGGEAV 306
G G GG G G QGAG G G P G G +V
Sbjct: 810 GTGGPGGAGPAGTTGSQGAGGNGGSGGTGGDPGDGGNGANGSV 852
Score = 29.6 bits (65), Expect(2) = 0.003
Identities = 15/40 (37%), Positives = 16/40 (39%)
Frame = +2
Query: 365 GNLNPDGSSIGPDAMGASRGADGGSSVKDGSKGPEGNGGA 484
G D S G RG DGG G+ G G GGA
Sbjct: 411 GGKGADAISSGQTGANGGRGGDGGQVGNGGAGGAGGRGGA 450
Score = 28.9 bits (63), Expect(2) = 1.2
Identities = 19/39 (48%), Positives = 19/39 (48%)
Frame = +1
Query: 178 GVQG*GGGGAYGA*AGQGAGARRQRAGVPGLPAPGAGGG 294
GV G GG G GA G AGAR Q G G G GG
Sbjct: 773 GVGGNGGRGIDGA-DGATAGARGQDGGAGGAGGKGGRGG 810
Score = 28.5 bits (62), Expect(2) = 5.5
Identities = 15/41 (36%), Positives = 21/41 (50%), Gaps = 2/41 (4%)
Frame = +2
Query: 365 GNLNPDGSSIGPDAMGASRGA--DGGSSVKDGSKGPEGNGG 481
GN G ++ P S+GA DGG+ G+ G G+GG
Sbjct: 1065 GNGGAGGKALSPTGNNGSQGAGGDGGAGGAGGTGGTGGDGG 1105
Score = 27.7 bits (60), Expect(2) = 0.006
Identities = 13/38 (34%), Positives = 15/38 (39%)
Frame = +2
Query: 365 GNLNPDGSSIGPDAMGASRGADGGSSVKDGSKGPEGNG 478
G D + G RG DGG G+ G GNG
Sbjct: 624 GGRGADATGFGQTGASGGRGGDGGLVGNGGAGGAGGNG 661
Score = 26.9 bits (58), Expect(2) = 2.6
Identities = 28/90 (31%), Positives = 31/90 (34%)
Frame = +1
Query: 28 GAGRATGRHRLPGVARHGAEHGGGRRVRGRHPHAHGHARVVVQGHHQCATGVQG*GGGGA 207
GAG A G + + GV A GG G G+ G G G G GG
Sbjct: 219 GAGGAGG-NGIAGVTGTSASTPGGSGTAGGAGGIGGNGGAGGAGGVLMGNGGNG-GAGGE 276
Query: 208 YGA*AGQGAGARRQRAGVPGLPAPGAGGGG 297
G GAGA A G G GG
Sbjct: 277 GGPGGAGGAGASGAHATNLGADGQAGGNGG 306
Score = 26.2 bits (56), Expect(2) = 0.010
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = +2
Query: 410 GASRGADGGSSVKDGSKGPEGNGGA 484
G S GGS G+ G GNGGA
Sbjct: 233 GTSASTPGGSGTAGGAGGIGGNGGA 257
Score = 26.2 bits (56), Expect(2) = 0.008
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = +2
Query: 380 DGSSIGPDAMGASRGADGGSSVKDGSKGPEGNGGA 484
DG++ G G GG + G+ GP G G A
Sbjct: 786 DGATAGARGQDGGAGGAGGKGGRGGTGGPGGAGPA 820
Score = 26.2 bits (56), Expect(2) = 0.028
Identities = 16/46 (34%), Positives = 20/46 (42%), Gaps = 5/46 (10%)
Frame = +2
Query: 365 GNLNPDGSSIGPDAMGASRGADGGSSVK-----DGSKGPEGNGGAQ 487
G+ +GSS G D G GG+ K DG P G G+Q
Sbjct: 715 GSDGVNGSSAGADGHPGGTGGVGGTGGKGGDGGDGGAAPNGVAGSQ 760
Score = 25.8 bits (55), Expect(2) = 7.1
Identities = 30/98 (30%), Positives = 34/98 (34%), Gaps = 8/98 (8%)
Frame = +1
Query: 28 GAGRATGRHRLPGVARHGAEHG-----GGRRVRGRHPHAHGHARVVVQGHHQCATGVQG- 189
G+G A G + G G G GG G G G H G G
Sbjct: 241 GSGTAGGAGGIGGNGGAGGAGGVLMGNGGNGGAGGEGGPGGAGGAGASGAHATNLGADGQ 300
Query: 190 -*GGGGAYGA*AGQGAGARRQRAGVPGL-PAPGAGGGG 297
G GG GA G G G+ GL + GAGG G
Sbjct: 301 AGGNGGNGGAGGTGGVGGPGGGHGLLGLGGSHGAGGAG 338
Score = 25.4 bits (54), Expect(2) = 0.21
Identities = 17/46 (36%), Positives = 20/46 (42%), Gaps = 6/46 (13%)
Frame = +2
Query: 362 IGNLNPDGSSIGPDAMGASR------GADGGSSVKDGSKGPEGNGG 481
IG +G + GP G S GA G SS + G GNGG
Sbjct: 858 IGGNGGNGGNAGPSGAGGSGGAGSTFGATGSSSSIHVNGGNGGNGG 903
Score = 24.6 bits (52), Expect(2) = 2.6
Identities = 15/40 (37%), Positives = 18/40 (44%), Gaps = 2/40 (5%)
Frame = +2
Query: 365 GNLNPDGSSIGPDAMGASRGADG--GSSVKDGSKGPEGNG 478
G + G G +G S GA G GS G+ G GNG
Sbjct: 314 GGVGGPGGGHGLLGLGGSHGAGGAGGSGGDGGAPGDGGNG 353
Score = 24.3 bits (51), Expect(2) = 7.1
Identities = 17/57 (29%), Positives = 22/57 (37%), Gaps = 8/57 (14%)
Frame = +2
Query: 365 GNLNPDGSSIGPDAMGAS--------RGADGGSSVKDGSKGPEGNGGAQRRNSSRSA 511
G DG + G GA+ G GG+ G+ G G GGA S+ A
Sbjct: 338 GGSGGDGGAPGDGGNGATGTWGHNLGAGGTGGNGGNPGAGGAGGAGGASVGGSAHGA 394
Score = 23.9 bits (50), Expect(2) = 1.2
Identities = 16/40 (40%), Positives = 19/40 (47%), Gaps = 2/40 (5%)
Frame = +2
Query: 365 GNLNPDGSSIGPDAMGASRGA--DGGSSVKDGSKGPEGNG 478
G P G+ GP S+GA +GGS G G GNG
Sbjct: 810 GTGGPGGA--GPAGTTGSQGAGGNGGSGGTGGDPGDGGNG 847
Score = 21.9 bits (45), Expect(2) = 5.5
Identities = 14/39 (35%), Positives = 15/39 (37%)
Frame = +1
Query: 181 VQG*GGGGAYGA*AGQGAGARRQRAGVPGLPAPGAGGGG 297
+ G GG G G GQG A A G GG G
Sbjct: 986 ITGSGGRGGDGGVGGQGGSVAGDGADGGRGGAGGTGGTG 1024
>ref|NP_854253.1| PE-PGRS FAMILY PROTEIN [Mycobacterium bovis subsp. bovis AF2122/97]
gi|31617347|emb|CAD93455.1| PE-PGRS FAMILY PROTEIN
[Mycobacterium bovis subsp. bovis AF2122/97]
Length = 1306
Score = 44.3 bits (103), Expect(2) = 3e-08
Identities = 33/96 (34%), Positives = 39/96 (40%), Gaps = 5/96 (5%)
Frame = +1
Query: 28 GAGRATGRHRLPGVA-RHGAEHGGGRRVRGRHPHAHGHARVVVQGHHQCATGVQG*GG-- 198
G G G H L G+ HGA GG G P G+ GH+ A G G GG
Sbjct: 315 GVGGPGGGHGLLGLGGSHGAGGAGGSGGDGGAPGDGGNGATGTWGHNLGAGGTGGNGGNP 374
Query: 199 --GGAYGA*AGQGAGARRQRAGVPGLPAPGAGGGGE 300
GGA GA G+ G PG + G GG+
Sbjct: 375 GAGGAGGAGGASVGGSAHGANGAPGTTSTSGGNGGD 410
Score = 34.7 bits (78), Expect(2) = 3e-08
Identities = 18/51 (35%), Positives = 25/51 (48%)
Frame = +2
Query: 332 DAISSDESPSIGNLNPDGSSIGPDAMGASRGADGGSSVKDGSKGPEGNGGA 484
DAISS ++ + G DG +G G + G G + GS+ P GGA
Sbjct: 416 DAISSGQTGANGGRGGDGGQVGNGGAGGAGGRGGAGGLGFGSEAPGRPGGA 466
Score = 34.3 bits (77), Expect(2) = 0.008
Identities = 30/91 (32%), Positives = 30/91 (32%)
Frame = +1
Query: 22 WAGAGRATGRHRLPGVARHGAEHGGGRRVRGRHPHAHGHARVVVQGHHQCATGVQG*GGG 201
WAG G G GV G G V G A GH G G GG
Sbjct: 693 WAGNGGTGGAGGTGGVGGTGGSGSDG--VNGSSAGADGHPG-----------GTGGVGGT 739
Query: 202 GAYGA*AGQGAGARRQRAGVPGLPAPGAGGG 294
G G G G A GV G PG GG
Sbjct: 740 GGKGGDGGDGGAAPN---GVAGSQGPGGAGG 767
Score = 33.9 bits (76), Expect(2) = 0.010
Identities = 35/110 (31%), Positives = 42/110 (37%), Gaps = 18/110 (16%)
Frame = +1
Query: 28 GAGRATGRHRLPGVARHGAEHGGGRRVRGRHPHAHGHARVVVQGHHQCATGVQG*GGGGA 207
G G+A G PG +G GG G+ A G A ++ G + A GV GG G
Sbjct: 124 GTGQAGG----PGGILYGNGGNGGSGAPGQRGGAGGAAGLIGNGGNGGAGGVGTTGGAGG 179
Query: 208 YGA*AG-----------QGAGARRQRAGVPGLP-------APGAGGGGEA 303
+G G GAGA G G A GAGG G A
Sbjct: 180 HGGAGGWLYGNGGAGGFGGAGAVGGNGGAGGTAGLFGVGGAGGAGGNGIA 229
Score = 33.1 bits (74), Expect(2) = 0.006
Identities = 31/103 (30%), Positives = 35/103 (33%), Gaps = 9/103 (8%)
Frame = +1
Query: 28 GAGRATGRHRLPGVA--------RHGAEHGGGRRVRGRHPHAHGHARVVVQGHHQCATGV 183
G G A G G+A GA GG G P GH G + G
Sbjct: 524 GPGGAGGEGGAGGLALAASGQNGSQGAGGDGGAGGNGGTPGNGGHGAAGALGVNGGVGGA 583
Query: 184 QG*GGGGAYGA*AGQ-GAGARRQRAGVPGLPAPGAGGGGEAVR 309
G GG G GQ G+G+ G PG G GG R
Sbjct: 584 GGHGGDPGVGGAGGQGGSGSTPGANGAPGNTPTSGGNGGNGGR 626
Score = 32.3 bits (72), Expect(2) = 0.003
Identities = 34/106 (32%), Positives = 38/106 (35%), Gaps = 13/106 (12%)
Frame = +1
Query: 25 AGAGRATGRHRL----PGVARHGAEHGGGRRVRGRHPHAHGHARVVVQGHHQCA------ 174
AG A+G H G A +GG G GH + + G H
Sbjct: 282 AGGAGASGAHATNLGADGQAGGNGGNGGAGGTGGVGGPGGGHGLLGLGGSHGAGGAGGSG 341
Query: 175 --TGVQG*GGGGAYGA*A-GQGAGARRQRAGVPGLPAPGAGGGGEA 303
G G GG GA G GAG G PG A GAGG G A
Sbjct: 342 GDGGAPGDGGNGATGTWGHNLGAGGTGGNGGNPG--AGGAGGAGGA 385
Score = 32.3 bits (72), Expect(2) = 0.028
Identities = 27/90 (30%), Positives = 33/90 (36%)
Frame = +1
Query: 28 GAGRATGRHRLPGVARHGAEHGGGRRVRGRHPHAHGHARVVVQGHHQCATGVQG*GGGGA 207
G+G G + PG +GG GR A G + G G+ G GG G
Sbjct: 600 GSGSTPGANGAPGNTPTSGGNGGNG---GRGADATGFGQTGASGGRGGDGGLVGNGGAGG 656
Query: 208 YGA*AGQGAGARRQRAGVPGLPAPGAGGGG 297
G +G R G PGL G GG
Sbjct: 657 AGGNGSKGLPG-LGRLGNPGLDGGTGGNGG 685
Score = 30.0 bits (66), Expect(2) = 0.21
Identities = 16/43 (37%), Positives = 17/43 (39%)
Frame = +1
Query: 178 GVQG*GGGGAYGA*AGQGAGARRQRAGVPGLPAPGAGGGGEAV 306
G G GG G G QGAG G G P G G +V
Sbjct: 810 GTGGPGGAGPAGTTGSQGAGGNGGSGGTGGDPGDGGNGANGSV 852
Score = 29.6 bits (65), Expect(2) = 0.003
Identities = 15/40 (37%), Positives = 16/40 (39%)
Frame = +2
Query: 365 GNLNPDGSSIGPDAMGASRGADGGSSVKDGSKGPEGNGGA 484
G D S G RG DGG G+ G G GGA
Sbjct: 411 GGKGADAISSGQTGANGGRGGDGGQVGNGGAGGAGGRGGA 450
Score = 28.9 bits (63), Expect(2) = 1.2
Identities = 19/39 (48%), Positives = 19/39 (48%)
Frame = +1
Query: 178 GVQG*GGGGAYGA*AGQGAGARRQRAGVPGLPAPGAGGG 294
GV G GG G GA G AGAR Q G G G GG
Sbjct: 773 GVGGNGGRGIDGA-DGATAGARGQDGGAGGAGGKGGRGG 810
Score = 28.5 bits (62), Expect(2) = 5.5
Identities = 15/41 (36%), Positives = 21/41 (50%), Gaps = 2/41 (4%)
Frame = +2
Query: 365 GNLNPDGSSIGPDAMGASRGA--DGGSSVKDGSKGPEGNGG 481
GN G ++ P S+GA DGG+ G+ G G+GG
Sbjct: 1065 GNGGAGGKALSPTGNNGSQGAGGDGGAGGTGGTGGTGGDGG 1105
Score = 27.7 bits (60), Expect(2) = 0.006
Identities = 13/38 (34%), Positives = 15/38 (39%)
Frame = +2
Query: 365 GNLNPDGSSIGPDAMGASRGADGGSSVKDGSKGPEGNG 478
G D + G RG DGG G+ G GNG
Sbjct: 624 GGRGADATGFGQTGASGGRGGDGGLVGNGGAGGAGGNG 661
Score = 26.9 bits (58), Expect(2) = 2.6
Identities = 28/90 (31%), Positives = 31/90 (34%)
Frame = +1
Query: 28 GAGRATGRHRLPGVARHGAEHGGGRRVRGRHPHAHGHARVVVQGHHQCATGVQG*GGGGA 207
GAG A G + + GV A GG G G+ G G G G GG
Sbjct: 219 GAGGAGG-NGIAGVTGTSASTPGGSGTAGGAGGIGGNGGAGGAGGVLMGNGGNG-GAGGE 276
Query: 208 YGA*AGQGAGARRQRAGVPGLPAPGAGGGG 297
G GAGA A G G GG
Sbjct: 277 GGPGGAGGAGASGAHATNLGADGQAGGNGG 306
Score = 26.6 bits (57), Expect(2) = 9.1
Identities = 29/83 (34%), Positives = 31/83 (36%), Gaps = 6/83 (7%)
Frame = +1
Query: 73 RHGAEHGGGRRVRGRHPHAHGHARVVVQGHHQCATGVQG*GGGGAYGA*AGQGAGARRQR 252
R GA GG +RG A G G A G G GG G G G G G
Sbjct: 1014 RGGAGGTGGTGLRGT-TGATGATGTFDAG----ADGHGGNGGTGGVGGTGGAGGGGGNGG 1068
Query: 253 AGVPGLP------APGAGGGGEA 303
AG L + GAGG G A
Sbjct: 1069 AGGKALSPTGNNGSQGAGGDGGA 1091
Score = 26.2 bits (56), Expect(2) = 0.010
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = +2
Query: 410 GASRGADGGSSVKDGSKGPEGNGGA 484
G S GGS G+ G GNGGA
Sbjct: 233 GTSASTPGGSGTAGGAGGIGGNGGA 257
Score = 26.2 bits (56), Expect(2) = 0.008
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = +2
Query: 380 DGSSIGPDAMGASRGADGGSSVKDGSKGPEGNGGA 484
DG++ G G GG + G+ GP G G A
Sbjct: 786 DGATAGARGQDGGAGGAGGKGGRGGTGGPGGAGPA 820
Score = 26.2 bits (56), Expect(2) = 0.028
Identities = 16/46 (34%), Positives = 20/46 (42%), Gaps = 5/46 (10%)
Frame = +2
Query: 365 GNLNPDGSSIGPDAMGASRGADGGSSVK-----DGSKGPEGNGGAQ 487
G+ +GSS G D G GG+ K DG P G G+Q
Sbjct: 715 GSDGVNGSSAGADGHPGGTGGVGGTGGKGGDGGDGGAAPNGVAGSQ 760
Score = 25.8 bits (55), Expect(2) = 7.1
Identities = 30/98 (30%), Positives = 34/98 (34%), Gaps = 8/98 (8%)
Frame = +1
Query: 28 GAGRATGRHRLPGVARHGAEHG-----GGRRVRGRHPHAHGHARVVVQGHHQCATGVQG- 189
G+G A G + G G G GG G G G H G G
Sbjct: 241 GSGTAGGAGGIGGNGGAGGAGGVLMGNGGNGGAGGEGGPGGAGGAGASGAHATNLGADGQ 300
Query: 190 -*GGGGAYGA*AGQGAGARRQRAGVPGL-PAPGAGGGG 297
G GG GA G G G+ GL + GAGG G
Sbjct: 301 AGGNGGNGGAGGTGGVGGPGGGHGLLGLGGSHGAGGAG 338
Score = 25.4 bits (54), Expect(2) = 0.21
Identities = 17/46 (36%), Positives = 20/46 (42%), Gaps = 6/46 (13%)
Frame = +2
Query: 362 IGNLNPDGSSIGPDAMGASR------GADGGSSVKDGSKGPEGNGG 481
IG +G + GP G S GA G SS + G GNGG
Sbjct: 858 IGGNGGNGGNAGPSGAGGSGGAGSTFGATGSSSSIHVNGGNGGNGG 903
Score = 24.6 bits (52), Expect(2) = 2.6
Identities = 15/40 (37%), Positives = 18/40 (44%), Gaps = 2/40 (5%)
Frame = +2
Query: 365 GNLNPDGSSIGPDAMGASRGADG--GSSVKDGSKGPEGNG 478
G + G G +G S GA G GS G+ G GNG
Sbjct: 314 GGVGGPGGGHGLLGLGGSHGAGGAGGSGGDGGAPGDGGNG 353
Score = 24.3 bits (51), Expect(2) = 7.1
Identities = 17/57 (29%), Positives = 22/57 (37%), Gaps = 8/57 (14%)
Frame = +2
Query: 365 GNLNPDGSSIGPDAMGAS--------RGADGGSSVKDGSKGPEGNGGAQRRNSSRSA 511
G DG + G GA+ G GG+ G+ G G GGA S+ A
Sbjct: 338 GGSGGDGGAPGDGGNGATGTWGHNLGAGGTGGNGGNPGAGGAGGAGGASVGGSAHGA 394
Score = 23.9 bits (50), Expect(2) = 1.2
Identities = 16/40 (40%), Positives = 19/40 (47%), Gaps = 2/40 (5%)
Frame = +2
Query: 365 GNLNPDGSSIGPDAMGASRGA--DGGSSVKDGSKGPEGNG 478
G P G+ GP S+GA +GGS G G GNG
Sbjct: 810 GTGGPGGA--GPAGTTGSQGAGGNGGSGGTGGDPGDGGNG 847
Score = 23.1 bits (48), Expect(2) = 9.1
Identities = 13/37 (35%), Positives = 16/37 (43%)
Frame = +2
Query: 413 ASRGADGGSSVKDGSKGPEGNGGAQRRNSSRSAAQMT 523
A G GG+ G+ G G GGA S+ A T
Sbjct: 1117 AGTGGTGGNGGTGGTGGTGGAGGAGGTGSTLGATGAT 1153
Score = 21.9 bits (45), Expect(2) = 5.5
Identities = 14/39 (35%), Positives = 15/39 (37%)
Frame = +1
Query: 181 VQG*GGGGAYGA*AGQGAGARRQRAGVPGLPAPGAGGGG 297
+ G GG G G GQG A A G GG G
Sbjct: 986 ITGSGGRGGDGGVGGQGGSVAGDGADGGRGGAGGTGGTG 1024
>ref|NP_335016.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551]
gi|13880121|gb|AAK44830.1| PE_PGRS family protein
[Mycobacterium tuberculosis CDC1551]
Length = 1306
Score = 44.3 bits (103), Expect(2) = 3e-08
Identities = 33/96 (34%), Positives = 39/96 (40%), Gaps = 5/96 (5%)
Frame = +1
Query: 28 GAGRATGRHRLPGVA-RHGAEHGGGRRVRGRHPHAHGHARVVVQGHHQCATGVQG*GG-- 198
G G G H L G+ HGA GG G P G+ GH+ A G G GG
Sbjct: 315 GVGGPGGGHGLLGLGGSHGAGGAGGSGGDGGAPGDGGNGATGTWGHNLRAGGTGGNGGNP 374
Query: 199 --GGAYGA*AGQGAGARRQRAGVPGLPAPGAGGGGE 300
GGA GA G+ G PG + G GG+
Sbjct: 375 GAGGAGGAGGASVGGSAHGANGAPGTTSTSGGNGGD 410
Score = 34.7 bits (78), Expect(2) = 3e-08
Identities = 18/51 (35%), Positives = 25/51 (48%)
Frame = +2
Query: 332 DAISSDESPSIGNLNPDGSSIGPDAMGASRGADGGSSVKDGSKGPEGNGGA 484
DAISS ++ + G DG +G G + G G + GS+ P GGA
Sbjct: 416 DAISSGQTGANGGRGGDGGQVGNGGAGGAGGRGGAGGLGFGSEAPGRPGGA 466
Score = 34.3 bits (77), Expect(2) = 0.008
Identities = 30/91 (32%), Positives = 30/91 (32%)
Frame = +1
Query: 22 WAGAGRATGRHRLPGVARHGAEHGGGRRVRGRHPHAHGHARVVVQGHHQCATGVQG*GGG 201
WAG G G GV G G V G A GH G G GG
Sbjct: 693 WAGNGGTGGAGGTGGVGGTGGSGSDG--VNGSSAGADGHPG-----------GTGGVGGT 739
Query: 202 GAYGA*AGQGAGARRQRAGVPGLPAPGAGGG 294
G G G G A GV G PG GG
Sbjct: 740 GGKGGDGGDGGAAPN---GVAGSQGPGGAGG 767
Score = 33.9 bits (76), Expect(2) = 0.010
Identities = 35/110 (31%), Positives = 42/110 (37%), Gaps = 18/110 (16%)
Frame = +1
Query: 28 GAGRATGRHRLPGVARHGAEHGGGRRVRGRHPHAHGHARVVVQGHHQCATGVQG*GGGGA 207
G G+A G PG +G GG G+ A G A ++ G + A GV GG G
Sbjct: 124 GTGQAGG----PGGILYGNGGNGGSGAPGQRGGAGGAAGLIGNGGNGGAGGVGTTGGAGG 179
Query: 208 YGA*AG-----------QGAGARRQRAGVPGLP-------APGAGGGGEA 303
+G G GAGA G G A GAGG G A
Sbjct: 180 HGGAGGWLYGNGGAGGFGGAGAVGGNGGAGGTAGLFGVGGAGGAGGNGIA 229
Score = 33.1 bits (74), Expect(2) = 0.006
Identities = 31/103 (30%), Positives = 35/103 (33%), Gaps = 9/103 (8%)
Frame = +1
Query: 28 GAGRATGRHRLPGVA--------RHGAEHGGGRRVRGRHPHAHGHARVVVQGHHQCATGV 183
G G A G G+A GA GG G P GH G + G
Sbjct: 524 GPGGAGGEGGAGGLALAASGQNGSQGAGGDGGAGGNGGTPGNGGHGAAGALGVNGGVGGA 583
Query: 184 QG*GGGGAYGA*AGQ-GAGARRQRAGVPGLPAPGAGGGGEAVR 309
G GG G GQ G+G+ G PG G GG R
Sbjct: 584 GGHGGDPGVGGAGGQGGSGSTPGANGAPGNTPTSGGNGGNGGR 626
Score = 32.3 bits (72), Expect(2) = 0.028
Identities = 27/90 (30%), Positives = 33/90 (36%)
Frame = +1
Query: 28 GAGRATGRHRLPGVARHGAEHGGGRRVRGRHPHAHGHARVVVQGHHQCATGVQG*GGGGA 207
G+G G + PG +GG GR A G + G G+ G GG G
Sbjct: 600 GSGSTPGANGAPGNTPTSGGNGGNG---GRGADATGFGQTGASGGRGGDGGLVGNGGAGG 656
Query: 208 YGA*AGQGAGARRQRAGVPGLPAPGAGGGG 297
G +G R G PGL G GG
Sbjct: 657 AGGNGSKGLPG-LGRLGNPGLDGGTGGNGG 685
Score = 30.0 bits (66), Expect(2) = 0.21
Identities = 16/43 (37%), Positives = 17/43 (39%)
Frame = +1
Query: 178 GVQG*GGGGAYGA*AGQGAGARRQRAGVPGLPAPGAGGGGEAV 306
G G GG G G QGAG G G P G G +V
Sbjct: 810 GTGGPGGAGPAGTTGSQGAGGNGGSGGTGGDPGDGGNGANGSV 852
Score = 28.9 bits (63), Expect(2) = 1.2
Identities = 19/39 (48%), Positives = 19/39 (48%)
Frame = +1
Query: 178 GVQG*GGGGAYGA*AGQGAGARRQRAGVPGLPAPGAGGG 294
GV G GG G GA G AGAR Q G G G GG
Sbjct: 773 GVGGNGGRGIDGA-DGATAGARGQDGGAGGAGGKGGRGG 810
Score = 28.5 bits (62), Expect(2) = 5.5
Identities = 15/41 (36%), Positives = 21/41 (50%), Gaps = 2/41 (4%)
Frame = +2
Query: 365 GNLNPDGSSIGPDAMGASRGA--DGGSSVKDGSKGPEGNGG 481
GN G ++ P S+GA DGG+ G+ G G+GG
Sbjct: 1065 GNGGAGGKALSPTGNNGSQGAGGDGGAGGAGGTGGTGGDGG 1105
Score = 28.1 bits (61), Expect(2) = 0.27
Identities = 30/96 (31%), Positives = 35/96 (36%), Gaps = 6/96 (6%)
Frame = +1
Query: 28 GAGRATGRHRLPGVARHGAEHGGGRR-VRGRHPHAHGHARVVVQGHHQCATGVQG*---- 192
GAG A G G + HGA G G + G + A G +G
Sbjct: 378 GAGGAGGAS--VGGSAHGANGAPGTTSTSGGNGGDGGKGADAISSGQTGANGGRGGDGGQ 435
Query: 193 -GGGGAYGA*AGQGAGARRQRAGVPGLPAPGAGGGG 297
G GGA GA GAG + PG P G GG
Sbjct: 436 VGNGGAGGAGGRGGAGGLGFGSEAPGRPGGAGGTGG 471
Score = 27.7 bits (60), Expect(2) = 0.006
Identities = 13/38 (34%), Positives = 15/38 (39%)
Frame = +2
Query: 365 GNLNPDGSSIGPDAMGASRGADGGSSVKDGSKGPEGNG 478
G D + G RG DGG G+ G GNG
Sbjct: 624 GGRGADATGFGQTGASGGRGGDGGLVGNGGAGGAGGNG 661
Score = 26.9 bits (58), Expect(2) = 0.27
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +2
Query: 383 GSSIGPDAMGASRGADGGSSVKDGSKGPEGNGGA 484
G + G G ++ DGG+ G+ G G+GGA
Sbjct: 467 GGTGGAGGNGGTQAGDGGTGGAGGAGGDGGSGGA 500
Score = 26.9 bits (58), Expect(2) = 2.6
Identities = 28/90 (31%), Positives = 31/90 (34%)
Frame = +1
Query: 28 GAGRATGRHRLPGVARHGAEHGGGRRVRGRHPHAHGHARVVVQGHHQCATGVQG*GGGGA 207
GAG A G + + GV A GG G G+ G G G G GG
Sbjct: 219 GAGGAGG-NGIAGVTGTSASTPGGSGTAGGAGGIGGNGGAGGAGGVLMGNGGNG-GAGGE 276
Query: 208 YGA*AGQGAGARRQRAGVPGLPAPGAGGGG 297
G GAGA A G G GG
Sbjct: 277 GGPGGAGGAGASGAHATNLGADGQAGGNGG 306
Score = 26.2 bits (56), Expect(2) = 0.008
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = +2
Query: 380 DGSSIGPDAMGASRGADGGSSVKDGSKGPEGNGGA 484
DG++ G G GG + G+ GP G G A
Sbjct: 786 DGATAGARGQDGGAGGAGGKGGRGGTGGPGGAGPA 820
Score = 26.2 bits (56), Expect(2) = 0.010
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = +2
Query: 410 GASRGADGGSSVKDGSKGPEGNGGA 484
G S GGS G+ G GNGGA
Sbjct: 233 GTSASTPGGSGTAGGAGGIGGNGGA 257
Score = 26.2 bits (56), Expect(2) = 0.028
Identities = 16/46 (34%), Positives = 20/46 (42%), Gaps = 5/46 (10%)
Frame = +2
Query: 365 GNLNPDGSSIGPDAMGASRGADGGSSVK-----DGSKGPEGNGGAQ 487
G+ +GSS G D G GG+ K DG P G G+Q
Sbjct: 715 GSDGVNGSSAGADGHPGGTGGVGGTGGKGGDGGDGGAAPNGVAGSQ 760
Score = 25.8 bits (55), Expect(2) = 7.1
Identities = 30/98 (30%), Positives = 34/98 (34%), Gaps = 8/98 (8%)
Frame = +1
Query: 28 GAGRATGRHRLPGVARHGAEHG-----GGRRVRGRHPHAHGHARVVVQGHHQCATGVQG- 189
G+G A G + G G G GG G G G H G G
Sbjct: 241 GSGTAGGAGGIGGNGGAGGAGGVLMGNGGNGGAGGEGGPGGAGGAGASGAHATNLGADGQ 300
Query: 190 -*GGGGAYGA*AGQGAGARRQRAGVPGL-PAPGAGGGG 297
G GG GA G G G+ GL + GAGG G
Sbjct: 301 AGGNGGNGGAGGTGGVGGPGGGHGLLGLGGSHGAGGAG 338
Score = 25.4 bits (54), Expect(2) = 0.21
Identities = 17/46 (36%), Positives = 20/46 (42%), Gaps = 6/46 (13%)
Frame = +2
Query: 362 IGNLNPDGSSIGPDAMGASR------GADGGSSVKDGSKGPEGNGG 481
IG +G + GP G S GA G SS + G GNGG
Sbjct: 858 IGGNGGNGGNAGPSGAGGSGGAGSTFGATGSSSSIHVNGGNGGNGG 903
Score = 24.6 bits (52), Expect(2) = 2.6
Identities = 15/40 (37%), Positives = 18/40 (44%), Gaps = 2/40 (5%)
Frame = +2
Query: 365 GNLNPDGSSIGPDAMGASRGADG--GSSVKDGSKGPEGNG 478
G + G G +G S GA G GS G+ G GNG
Sbjct: 314 GGVGGPGGGHGLLGLGGSHGAGGAGGSGGDGGAPGDGGNG 353
Score = 24.3 bits (51), Expect(2) = 7.1
Identities = 17/57 (29%), Positives = 22/57 (37%), Gaps = 8/57 (14%)
Frame = +2
Query: 365 GNLNPDGSSIGPDAMGAS--------RGADGGSSVKDGSKGPEGNGGAQRRNSSRSA 511
G DG + G GA+ G GG+ G+ G G GGA S+ A
Sbjct: 338 GGSGGDGGAPGDGGNGATGTWGHNLRAGGTGGNGGNPGAGGAGGAGGASVGGSAHGA 394
Score = 23.9 bits (50), Expect(2) = 1.2
Identities = 16/40 (40%), Positives = 19/40 (47%), Gaps = 2/40 (5%)
Frame = +2
Query: 365 GNLNPDGSSIGPDAMGASRGA--DGGSSVKDGSKGPEGNG 478
G P G+ GP S+GA +GGS G G GNG
Sbjct: 810 GTGGPGGA--GPAGTTGSQGAGGNGGSGGTGGDPGDGGNG 847
Score = 21.9 bits (45), Expect(2) = 5.5
Identities = 14/39 (35%), Positives = 15/39 (37%)
Frame = +1
Query: 181 VQG*GGGGAYGA*AGQGAGARRQRAGVPGLPAPGAGGGG 297
+ G GG G G GQG A A G GG G
Sbjct: 986 ITGSGGRGGDGGVGGQGGSVAGDGADGGRGGAGGTGGTG 1024
>ref|NP_825588.1| putative GntR-family transcriptional regulator [Streptomyces
avermitilis MA-4680] gi|29608067|dbj|BAC72123.1|
putative GntR-family transcriptional regulator
[Streptomyces avermitilis MA-4680]
Length = 478
Score = 53.1 bits (126), Expect(2) = 2e-07
Identities = 61/163 (37%), Positives = 68/163 (41%), Gaps = 15/163 (9%)
Frame = +1
Query: 19 HWAGAGRATGRHR--LPGVARHGAE---HGGGRRVRGR-HPHAHGHARVVVQGHHQCATG 180
H G TGRHR L R G GGRR GR P AH R VQ A G
Sbjct: 237 HAGGPAARTGRHREGLGAAGRRGPHLVVPPGGRRPAGRVRPRAHVRRRRTVQAGRAGAHG 296
Query: 181 VQG*GGGGAYGA*AGQGAGARRQRAGVP-GLPAPGA--GGGGEAVREPRRHRP--RRDL- 342
G GG A G GAG R R G G GA GGG AV R RP RR+
Sbjct: 297 RVPRGAGGPGRAGGGGGAGRGRGRRGAAVGRVDGGAVRAGGGGAVERGRDGRPAGRREAG 356
Query: 343 -QRRVALHRQSQP*RFQHRAGRDGRVAR--RGRRQLGEGRLQG 462
+ R A + P R HR+GR V R R + G ++G
Sbjct: 357 GRGRAAAAGRRAPCRV-HRSGRSAGVLRLVGAARAVAGGHVRG 398
Score = 23.1 bits (48), Expect(2) = 2e-07
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +3
Query: 447 RTAPRAQKATAARSGATRRAARRR 518
R RA+ +AAR+GA ARRR
Sbjct: 422 RRQARARVGSAARTGAGAADARRR 445
>ref|NP_039875.1| nuclear antigen EBNA1 [Human herpesvirus 4]
gi|119110|sp|P03211|EBN1_EBV EBNA-1 nuclear protein
gi|73987|pir||QQBE31 nuclear antigen EBNA1 - human
herpesvirus 4 gi|1334880|emb|CAA24816.1| BKRF1 encodes
EBNA-1 protein, latent cycle gene. [Human herpesvirus 4]
gi|23893623|emb|CAD53427.1| EBNA-1 protein [Human
herpesvirus 4] gi|30407699|gb|AAO61295.1| EBNA-1 [BAC
cloning vector pEBAC190G]
Length = 641
Score = 50.4 bits (119), Expect(2) = 1e-06
Identities = 36/92 (39%), Positives = 39/92 (42%)
Frame = +1
Query: 28 GAGRATGRHRLPGVARHGAEHGGGRRVRGRHPHAHGHARVVVQGHHQCATGVQG*GGGGA 207
G GR GR PG + G H G R + P G +G H G GG GA
Sbjct: 46 GRGRGGGRPGAPGGSGSGPRHRDGVRRPQKRPSCIG-----CKGTHGGTGAGAGAGGAGA 100
Query: 208 YGA*AGQGAGARRQRAGVPGLPAPGAGGGGEA 303
GA AG GAGA G G GAGGG A
Sbjct: 101 GGAGAGGGAGAGGGAGGAGGAGGAGAGGGAGA 132
Score = 40.4 bits (93), Expect(2) = 5e-04
Identities = 33/91 (36%), Positives = 33/91 (36%)
Frame = +1
Query: 25 AGAGRATGRHRLPGVARHGAEHGGGRRVRGRHPHAHGHARVVVQGHHQCATGVQG*GGGG 204
AGAG G G A GA GGG G A G G G G G GG
Sbjct: 130 AGAGGGAGGAGGAG-AGGGAGAGGGAGGAGAGGGAGGAGGAGAGGGAGAGGGAGGAGAGG 188
Query: 205 AYGA*AGQGAGARRQRAGVPGLPAPGAGGGG 297
G G GAG G G GAGG G
Sbjct: 189 GAGGAGGAGAGGGAGAGGAGGAGGAGAGGAG 219
Score = 40.4 bits (93), Expect(2) = 2e-04
Identities = 35/91 (38%), Positives = 35/91 (38%), Gaps = 1/91 (1%)
Frame = +1
Query: 28 GAGRATGRHRLPGVARHGAEHGGGRRVRGRHPHAHGHARVVVQGHHQC-ATGVQG*GGGG 204
GAG A G A GA GG G G G A G G G GG
Sbjct: 206 GAGGAGGAGAGGAGAGGGAGGAGGAGAGGAGAGGAGAGGAGAGGAGGAGAGGAGGAGAGG 265
Query: 205 AYGA*AGQGAGARRQRAGVPGLPAPGAGGGG 297
A GA AG GAG G G A GAGG G
Sbjct: 266 AGGAGAGGGAGGAGAGGGAGGAGAGGAGGAG 296
Score = 40.4 bits (93), Expect = 0.015
Identities = 49/164 (29%), Positives = 57/164 (33%)
Frame = +1
Query: 25 AGAGRATGRHRLPGVARHGAEHGGGRRVRGRHPHAHGHARVVVQGHHQCATGVQG*GGGG 204
AGAG A G G GA G G G A A G G G GG
Sbjct: 261 AGAGGAGGAGAGGGAGGAGAGGGAGGAGAGGAGGAG-------------AGGAGGAGAGG 307
Query: 205 AYGA*AGQGAGARRQRAGVPGLPAPGAGGGGEAVREPRRHRPRRDLQRRVALHRQSQP*R 384
A GA AG GAGA AG G G+GG G R
Sbjct: 308 AGGAGAGGGAGAGGAGAGGGGRGRGGSGGRGRGGSGGRGRGGSGG--------------- 352
Query: 385 FQHRAGRDGRVARRGRRQLGEGRLQGPRRQRRRAAAQLVAQRGA 516
R GR AR G R+ GR +G +R R+ + + G+
Sbjct: 353 ---RRGRGRERARGGSRERARGRGRGRGEKRPRSPSSQSSSSGS 393
Score = 39.3 bits (90), Expect(2) = 0.006
Identities = 35/92 (38%), Positives = 35/92 (38%)
Frame = +1
Query: 28 GAGRATGRHRLPGVARHGAEHGGGRRVRGRHPHAHGHARVVVQGHHQCATGVQG*GGGGA 207
GAG G G GA GGG G A G G G G GG GA
Sbjct: 90 GAGAGAG-----GAGAGGAGAGGGAGAGGGAGGAGGAGGAGAGGGAGAGGGAGGAGGAGA 144
Query: 208 YGA*AGQGAGARRQRAGVPGLPAPGAGGGGEA 303
G AG G GA AG A GAG GG A
Sbjct: 145 GGG-AGAGGGAGGAGAGGGAGGAGGAGAGGGA 175
Score = 38.9 bits (89), Expect(2) = 0.003
Identities = 39/91 (42%), Positives = 39/91 (42%)
Frame = +1
Query: 25 AGAGRATGRHRLPGVARHGAEHGGGRRVRGRHPHAHGHARVVVQGHHQCATGVQG*GGGG 204
AGAG G G A GA GGG G A G A G A G G GG G
Sbjct: 157 AGAGGGAGGAGGAG-AGGGAGAGGGAGGAGAGGGAGG-AGGAGAGGGAGAGGAGGAGGAG 214
Query: 205 AYGA*AGQGAGARRQRAGVPGLPAPGAGGGG 297
A GA AG GAG G G A GAG GG
Sbjct: 215 AGGAGAGGGAG------GAGGAGAGGAGAGG 239
Score = 38.5 bits (88), Expect = 0.057
Identities = 36/97 (37%), Positives = 36/97 (37%), Gaps = 5/97 (5%)
Frame = +1
Query: 28 GAGRATGRHRLPGVARHGAEHGGGRRVRGRHPHAHGHARVVVQGHHQCATGVQG*GGG-- 201
GAG A G G G G G G A G A G G G GGG
Sbjct: 117 GAGGAGGAGAGGGAGAGGGAGGAGGAGAGGGAGAGGGAGGAGAGGGAGGAGGAGAGGGAG 176
Query: 202 ---GAYGA*AGQGAGARRQRAGVPGLPAPGAGGGGEA 303
GA GA AG GAG G A GAGG G A
Sbjct: 177 AGGGAGGAGAGGGAGGAGGAGAGGGAGAGGAGGAGGA 213
Score = 38.1 bits (87), Expect = 0.074
Identities = 49/156 (31%), Positives = 53/156 (33%), Gaps = 6/156 (3%)
Frame = +1
Query: 25 AGAGRATGRHRLPGVARHGAEHGGGRRVRGRHPHAHGHARVVVQGHHQCATGVQG*GGGG 204
AGAG A G GA GGG G A G G G G GG G
Sbjct: 253 AGAGGAGGAG---AGGAGGAGAGGGAGGAGAGGGAGGAGAGGAGGAGAGGAGGAGAGGAG 309
Query: 205 AYGA*AGQGAGAR------RQRAGVPGLPAPGAGGGGEAVREPRRHRPRRDLQRRVALHR 366
GA G GAG R R G G G+GG G RR R R
Sbjct: 310 GAGAGGGAGAGGAGAGGGGRGRGGSGGRGRGGSGGRGRGGSGGRRGRGRE---------- 359
Query: 367 QSQP*RFQHRAGRDGRVARRGRRQLGEGRLQGPRRQ 474
+ R G R RGR + GE R + P Q
Sbjct: 360 -------RARGGSRERARGRGRGR-GEKRPRSPSSQ 387
Score = 36.6 bits (83), Expect = 0.21
Identities = 37/95 (38%), Positives = 37/95 (38%), Gaps = 2/95 (2%)
Frame = +1
Query: 25 AGAGRATGRHRLPGVARHGAEHGGGRRVRGRHPHAHGHARVVVQGHHQCATGVQG*GGGG 204
AGAG A G G GA GGG A G G G G G GG
Sbjct: 202 AGAGGAGGAG---GAGAGGAGAGGG---------AGGAGGAGAGGAGAGGAGAGGAGAGG 249
Query: 205 AYGA*AGQGAGARRQRAGVPGL--PAPGAGGGGEA 303
A GA AG GA AG G A GAG GG A
Sbjct: 250 AGGAGAGGAGGAGAGGAGGAGAGGGAGGAGAGGGA 284
Score = 35.0 bits (79), Expect = 0.62
Identities = 40/140 (28%), Positives = 47/140 (33%), Gaps = 3/140 (2%)
Frame = +1
Query: 25 AGAGRATGRHRLPGVARHGAEHGGGRRVRGRHPHAHGHARVVVQGHHQCATGVQG*GGGG 204
AGAG G G GA GG G G G G GG G
Sbjct: 278 AGAGGGAGGAGAGGAGGAGAGGAGGAGAGGAGGAGAG--------------GGAGAGGAG 323
Query: 205 AYGA*AGQGAGARRQRAGVPGLPAPGAGGGGEAVREPRRHRPRRDLQRRVALHRQSQP*R 384
A G G+G R R G G G+GG RE R R + R + +P
Sbjct: 324 AGGGGRGRGGSGGRGRGGSGGRGRGGSGGRRGRGRERARGGSRERARGRGRGRGEKRPRS 383
Query: 385 FQHRAGRDGRVARR---GRR 435
++ G RR GRR
Sbjct: 384 PSSQSSSSGSPPRRPPPGRR 403
Score = 32.0 bits (71), Expect(2) = 0.17
Identities = 35/93 (37%), Positives = 35/93 (37%)
Frame = +1
Query: 25 AGAGRATGRHRLPGVARHGAEHGGGRRVRGRHPHAHGHARVVVQGHHQCATGVQG*GGGG 204
AGAG G G A G GG G G A G A G G G GG
Sbjct: 218 AGAGGGAGG---AGGAGAGGAGAGGAGAGGAGAGGAGGAGAGGAGGAG-AGGAGGAGAGG 273
Query: 205 AYGA*AGQGAGARRQRAGVPGLPAPGAGGGGEA 303
G AG G GA AG G GAGG G A
Sbjct: 274 GAGG-AGAGGGA--GGAGAGGAGGAGAGGAGGA 303
Score = 25.4 bits (54), Expect(2) = 5.8
Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 3/45 (6%)
Frame = +1
Query: 196 GGGAYGA*AGQGAGARRQRAGVPGLPAPGAGGG---GEAVREPRR 321
GG +G G+G G R G PG G+G G + VR P++
Sbjct: 35 GGDNHGRGRGRGRGRGGGRPGAPG----GSGSGPRHRDGVRRPQK 75
Score = 25.4 bits (54), Expect(2) = 2e-04
Identities = 17/53 (32%), Positives = 23/53 (43%), Gaps = 2/53 (3%)
Frame = +2
Query: 383 GSSIGPDAMGASRGADGGSSVKDGS--KGPEGNGGAQRRNSSRSAAQMTKRQR 535
G+ G A GA GG + GS +G G+GG R S + +R R
Sbjct: 310 GAGAGGGAGAGGAGAGGGGRGRGGSGGRGRGGSGGRGRGGSGGRRGRGRERAR 362
Score = 25.0 bits (53), Expect(2) = 5.8
Identities = 12/34 (35%), Positives = 15/34 (43%)
Frame = +2
Query: 383 GSSIGPDAMGASRGADGGSSVKDGSKGPEGNGGA 484
G+ G G GA GG+ G+ G GGA
Sbjct: 97 GAGAGGAGAGGGAGAGGGAGGAGGAGGAGAGGGA 130
Score = 24.3 bits (51), Expect(2) = 5e-04
Identities = 13/40 (32%), Positives = 15/40 (37%)
Frame = +2
Query: 365 GNLNPDGSSIGPDAMGASRGADGGSSVKDGSKGPEGNGGA 484
G G+ G A GA GG+ G G GGA
Sbjct: 211 GGAGAGGAGAGGGAGGAGGAGAGGAGAGGAGAGGAGAGGA 250
Score = 23.9 bits (50), Expect(2) = 0.17
Identities = 15/51 (29%), Positives = 20/51 (38%)
Frame = +2
Query: 383 GSSIGPDAMGASRGADGGSSVKDGSKGPEGNGGAQRRNSSRSAAQMTKRQR 535
G S G G+ GGS + G GG++ R R + KR R
Sbjct: 332 GGSGGRGRGGSGGRGRGGSGGRRGRGRERARGGSRERARGRGRGRGEKRPR 382
Score = 23.1 bits (48), Expect(2) = 1e-06
Identities = 12/33 (36%), Positives = 14/33 (42%)
Frame = +2
Query: 383 GSSIGPDAMGASRGADGGSSVKDGSKGPEGNGG 481
G+ G A GA GG + G G G GG
Sbjct: 156 GAGAGGGAGGAGGAGAGGGAGAGGGAGGAGAGG 188
Score = 23.1 bits (48), Expect(2) = 0.003
Identities = 11/27 (40%), Positives = 13/27 (47%)
Frame = +2
Query: 404 AMGASRGADGGSSVKDGSKGPEGNGGA 484
A GA G GG+ G+ G GGA
Sbjct: 258 AGGAGAGGAGGAGAGGGAGGAGAGGGA 284
Score = 21.6 bits (44), Expect(2) = 0.006
Identities = 11/30 (36%), Positives = 12/30 (39%)
Frame = +2
Query: 395 GPDAMGASRGADGGSSVKDGSKGPEGNGGA 484
G G GA GG+ G G GGA
Sbjct: 167 GGAGAGGGAGAGGGAGGAGAGGGAGGAGGA 196
