KCC002532A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC002532A_C01 KCC002532A_c01
gcgtcgctgccgccgccgctgccagcggctgccgccgcggcggcagcgggcgtgaacggc
aatggcaacggcaacggtgcCGCGGCTGTGGAGGGCCCGCTGAAGAAGAAGCACGCGGTG
CGGCCGCCGGTGCAGCACAAGTGGGGCTACGGGCCGCTGGCGCCAGGCGAGCAGCCGGCG
GAGGTGAAGATCTTCCGCCACCCGCTGCTGCAGCACTTCATGCTGTCCGTGTTCTGCAAG
CTGCCCATCCAGTCCATGACGCGCATGGCGCACCTCAAGCAGCTGCTCATGCTGCGCATC
ATCCTGTCCGTATTCCAGTTCCGGATCAACGGCCGCTACGTGACCGGCCAGCCGCCGTTC
CTGTCCATCGCTCTGGACATCAGCGACAGCGGCCGCGAGGGCTGCGCCGTGTCCACCCTC
ACCGTGACCTCGGAGCCGGCGGACTGGCAGGGCGCCGTGAGCGTGGCGGTGCAGGAGATG
CGCCGCATGCAGCGCCACGGCCTGACGCAGGGCGAGTTCGACCGCTACCGCCAGGCCATC
CTGCGCGACAGCGCGCAGCTGGCGGAGCAGGCCAACAAGATTCCCAGTGTGGACACGCTG
AACTTCGTGATGGAGAGCCTGGCGTGCGGCCACACGGTGATGGGGCACCGCGACGCACAC
GCGGCCATGAGCGCCGTGGCGGACACGGTCCAGCTGGAGGAGGTGAACGCGCTGGCTCGC
TCCATGCTCACCTTCGCCTCCGACTACGGCGCGGAGGAGCAGATGCTGGCCACCGCC


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC002532A_C01 KCC002532A_c01
         (777 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

pir||T03302 pitrilysin (EC 3.4.24.55) precursor - Arabidopsis th...   226  4e-58
ref|NP_199054.1| pitrilysin [Arabidopsis thaliana] gi|9759475|db...   224  1e-57
pir||T06521 pitrilysin (EC 3.4.24.55) - garden pea gi|799369|gb|...   217  1e-55
sp|P03181|YHL1_EBV HYPOTHETICAL BHLF1 PROTEIN gi|73912|pir||QQBE...    64  3e-09
ref|ZP_00092697.1| COG1020: Non-ribosomal peptide synthetase mod...    64  3e-09

>pir||T03302 pitrilysin (EC 3.4.24.55) precursor - Arabidopsis thaliana
            gi|2827039|gb|AAC39482.1| chloroplast processing enzyme
            [Arabidopsis thaliana]
          Length = 1265

 Score =  226 bits (575), Expect = 4e-58
 Identities = 118/257 (45%), Positives = 158/257 (60%)
 Frame = +1

Query: 7    LPPPLPAAAAAAAAGVNGNGNGNGAAAVEGPLKKKHAVRPPVQHKWGYGPLAPGEQPAEV 186
            L P LPA       G   N   N A   +   +++HA+RPPV+H W     +   +P + 
Sbjct: 427  LVPKLPAGLG----GTFSNEKTNTADQSKMIKRERHAIRPPVEHNWSLPGTSVDLKPPQ- 481

Query: 187  KIFRHPLLQHFMLSVFCKLPIQSMTRMAHLKQLLMLRIILSVFQFRINGRYVTGQPPFLS 366
             IF+H LLQ+F +++FCK+P+  +     L+ +LM RI LS   FRIN RY +  PPF S
Sbjct: 482  -IFKHELLQNFAINMFCKIPVSKVQTFGDLRNVLMKRIFLSALHFRINTRYKSSNPPFTS 540

Query: 367  IALDISDSGREGCAVSTLTVTSEPADWQGAVSVAVQEMRRMQRHGLTQGEFDRYRQAILR 546
            + LD SDSGREGC V+TLTVT+EP +WQ AV VAVQE+RR++  G+T+GE  RY  A+L+
Sbjct: 541  VELDHSDSGREGCTVTTLTVTAEPQNWQNAVKVAVQEVRRLKEFGVTRGELTRYMDALLK 600

Query: 547  DSAQLAEQANKIPSVDTLNFVMESLACGHTVMGHRDAHAAMSAVADTVQLEEVNALARSM 726
            DS  LA   + + SVD L+F+MES A  HTVM     H  + AVA TV LEEVN +   +
Sbjct: 601  DSEHLAAMIDNVSSVDNLDFIMESDALSHTVMDQTQGHETLVAVAGTVTLEEVNTVGAKV 660

Query: 727  LTFASDYGAEEQMLATA 777
            L F SD+G    +L  A
Sbjct: 661  LEFISDFGRPTALLPAA 677

>ref|NP_199054.1| pitrilysin [Arabidopsis thaliana] gi|9759475|dbj|BAB10480.1|
            pitrilysin [Arabidopsis thaliana]
            gi|23397285|gb|AAN31924.1| putative pitrilysin
            [Arabidopsis thaliana]
          Length = 1265

 Score =  224 bits (571), Expect = 1e-57
 Identities = 118/257 (45%), Positives = 157/257 (60%)
 Frame = +1

Query: 7    LPPPLPAAAAAAAAGVNGNGNGNGAAAVEGPLKKKHAVRPPVQHKWGYGPLAPGEQPAEV 186
            L P LPA       G   N   N A   +   +++HA+RPPV+H W     +   +P + 
Sbjct: 427  LVPKLPAGLG----GTFSNEKTNTADQSKMIKRERHAIRPPVEHNWSLPGTSVDLKPPQ- 481

Query: 187  KIFRHPLLQHFMLSVFCKLPIQSMTRMAHLKQLLMLRIILSVFQFRINGRYVTGQPPFLS 366
             IF+H LLQ+F +++FCK+P+  +     L+ +LM RI LS   FRIN RY +  PPF S
Sbjct: 482  -IFKHELLQNFAINMFCKIPVSKVQTFGDLRNVLMKRIFLSALHFRINTRYKSSNPPFTS 540

Query: 367  IALDISDSGREGCAVSTLTVTSEPADWQGAVSVAVQEMRRMQRHGLTQGEFDRYRQAILR 546
            + LD SDSGREGC V+TLTVT+EP +WQ AV VAVQE+RR++  G+T+GE  RY  A+L+
Sbjct: 541  VELDHSDSGREGCTVTTLTVTAEPQNWQNAVKVAVQEVRRLKEFGVTRGELTRYMDALLK 600

Query: 547  DSAQLAEQANKIPSVDTLNFVMESLACGHTVMGHRDAHAAMSAVADTVQLEEVNALARSM 726
            DS  LA   + + SVD L+F+MES A  HTVM     H  + AVA TV LEEVN +   +
Sbjct: 601  DSEHLAAMIDNVSSVDNLDFIMESDALSHTVMDQTQGHETLVAVAGTVTLEEVNTVGAKV 660

Query: 727  LTFASDYGAEEQMLATA 777
            L F SD+G     L  A
Sbjct: 661  LEFISDFGRPTAPLPAA 677

>pir||T06521 pitrilysin (EC 3.4.24.55) - garden pea gi|799369|gb|AAA81472.1|
            metalloendopeptidase
          Length = 1259

 Score =  217 bits (553), Expect = 1e-55
 Identities = 106/216 (49%), Positives = 146/216 (67%)
 Frame = +1

Query: 103  KKKHAVRPPVQHKWGYGPLAPGEQPAEVKIFRHPLLQHFMLSVFCKLPIQSMTRMAHLKQ 282
            K++HAVRPPV+H W     +   +P +  IF+H LLQ+F +++FCK+P+  +     L+ 
Sbjct: 451  KERHAVRPPVKHTWSLPGSSANLKPPQ--IFQHELLQNFSINMFCKIPVNKVQTYRDLRI 508

Query: 283  LLMLRIILSVFQFRINGRYVTGQPPFLSIALDISDSGREGCAVSTLTVTSEPADWQGAVS 462
            +LM RI LS   FRIN RY +  PPF S+ LD SDSGREGC V+TLT+T+EP +WQ A+ 
Sbjct: 509  VLMKRIFLSALHFRINTRYKSSNPPFTSVELDHSDSGREGCTVTTLTITAEPKNWQNAIR 568

Query: 463  VAVQEMRRMQRHGLTQGEFDRYRQAILRDSAQLAEQANKIPSVDTLNFVMESLACGHTVM 642
            VAV E+RR++  G+TQGE  RY  A+LRDS  LA   + + SVD L+F+MES A GH VM
Sbjct: 569  VAVHEVRRLKEFGVTQGELTRYLDALLRDSEHLAAMIDNVSSVDNLDFIMESDALGHKVM 628

Query: 643  GHRDAHAAMSAVADTVQLEEVNALARSMLTFASDYG 750
                 H ++ AVA TV L+EVN++   +L F +D+G
Sbjct: 629  DQSQGHESLIAVAGTVTLDEVNSVGAQVLEFIADFG 664

>sp|P03181|YHL1_EBV HYPOTHETICAL BHLF1 PROTEIN gi|73912|pir||QQBE3 BHLF1 protein - human
            herpesvirus 4 (strain B95-8) gi|23893591|emb|CAD53473.1|
            BHLF1 early reading frame [Human herpesvirus 4]
          Length = 660

 Score = 63.9 bits (154), Expect = 3e-09
 Identities = 84/283 (29%), Positives = 96/283 (33%), Gaps = 51/283 (18%)
 Frame = -3

Query: 775  RWPASAPPRRSRRRR*AWSEPARSPPPAGP-------CPPRRSWPR---VRRGAPSP-CG 629
            R PA  PP RS     A ++     PP  P       CP  R+W R    +RG P P  G
Sbjct: 372  RCPAGPPPTRSG----AAAQRTHRRPPGCPRSARNPGCP--RTWRRRSGAQRGHPPPGAG 425

Query: 628  RTPGSPSRSSACPHWESCWPAPPAARCRAGWPGGSGRTRPASGRGAACGASPAPPRSRRP 449
            + P  P+            PA P A      PG      P  G     GA+P P R   P
Sbjct: 426  QRPSGPTGGR---------PAAPGA------PGTPAAPGPGGGAAVPSGATPHPERGSGP 470

Query: 448  ASPPA---------------------------PRSR*GW----TRRSPRG-----RCR*C 377
            A PPA                           P +R G     T R P G     R   C
Sbjct: 471  ADPPAAARLPPERQEPRLPQDLAAAQRCPAGPPPTRSGAAAQRTHRRPPGCPRSARNPGC 530

Query: 376  PERWTGTAAGRSRSGR*SGTGIR----TG*CAA*AAA*GAPCASWTGWAACRTRTA*SAA 209
            P  W    +G  R     G G R    TG   A   A G P A   G  A     A    
Sbjct: 531  PRTWR-RRSGAQRGHPPPGAGQRPSGPTGGRPAAPGAPGTPAAPGPGGGAAVPSGATPHP 589

Query: 208  AAGGGRSSPPPAARLAPAARSPTCAAPAAAPRASSSAGPPQPR 80
              G G + PP AARL P  + P      AA +    AGPP  R
Sbjct: 590  ERGSGPADPPAAARLPPERQEPRLPQDLAAAQ-RCPAGPPPTR 631

 Score = 63.9 bits (154), Expect = 3e-09
 Identities = 84/283 (29%), Positives = 96/283 (33%), Gaps = 51/283 (18%)
 Frame = -3

Query: 775  RWPASAPPRRSRRRR*AWSEPARSPPPAGP-------CPPRRSWPR---VRRGAPSP-CG 629
            R PA  PP RS     A ++     PP  P       CP  R+W R    +RG P P  G
Sbjct: 247  RCPAGPPPTRSG----AAAQRTHRRPPGCPRSARNPGCP--RTWRRRSGAQRGHPPPGAG 300

Query: 628  RTPGSPSRSSACPHWESCWPAPPAARCRAGWPGGSGRTRPASGRGAACGASPAPPRSRRP 449
            + P  P+            PA P A      PG      P  G     GA+P P R   P
Sbjct: 301  QRPSGPTGGR---------PAAPGA------PGTPAAPGPGGGAAVPSGATPHPERGSGP 345

Query: 448  ASPPA---------------------------PRSR*GW----TRRSPRG-----RCR*C 377
            A PPA                           P +R G     T R P G     R   C
Sbjct: 346  ADPPAAARLPPERQEPRLPQDLAAAQRCPAGPPPTRSGAAAQRTHRRPPGCPRSARNPGC 405

Query: 376  PERWTGTAAGRSRSGR*SGTGIR----TG*CAA*AAA*GAPCASWTGWAACRTRTA*SAA 209
            P  W    +G  R     G G R    TG   A   A G P A   G  A     A    
Sbjct: 406  PRTWR-RRSGAQRGHPPPGAGQRPSGPTGGRPAAPGAPGTPAAPGPGGGAAVPSGATPHP 464

Query: 208  AAGGGRSSPPPAARLAPAARSPTCAAPAAAPRASSSAGPPQPR 80
              G G + PP AARL P  + P      AA +    AGPP  R
Sbjct: 465  ERGSGPADPPAAARLPPERQEPRLPQDLAAAQ-RCPAGPPPTR 506

 Score = 53.1 bits (126), Expect = 5e-06
 Identities = 71/244 (29%), Positives = 88/244 (35%), Gaps = 17/244 (6%)
 Frame = -3

Query: 760 APPRRSRRRR*AWSEPARSPPP-------AGPCPPRRSWPRVRRGAPSPCGRTPGSPSRS 602
           AP +++RR    W +  R+ P        A P   +      R G  +  G   G P   
Sbjct: 27  APDQQTRRLPPGWGQ--RTAPTQVGLADAASPDELQDQASGARPGGGNRVGAGRGRPGTP 84

Query: 601 SACPHWESCWPAPPAARCRAGWPGG------SGRTRPASGRGAACGASPAPPRSRRPASP 440
           +         PA  A    +   GG      S RTR A   G A G   A   SR P   
Sbjct: 85  APSRQSRRTGPAEQADHAHSNPTGGCSDPQRSPRTRQA---GYALGEGSAGLGSRGPRPH 141

Query: 439 PAPRSR*GWTRRSPRGRCR*CPERWTGTAAGRSRSGR*SGTGIR----TG*CAA*AAA*G 272
           PA + +  W+ R+P      CP  W    +G  R     G G R    TG   A   A G
Sbjct: 142 PAFQVQ--WSARNPG-----CPRTWR-RRSGAQRGHPPPGAGQRPSGPTGGRPAAPGAPG 193

Query: 271 APCASWTGWAACRTRTA*SAAAAGGGRSSPPPAARLAPAARSPTCAAPAAAPRASSSAGP 92
            P A   G  A     A      G G + PP AARL P  + P      AA +    AGP
Sbjct: 194 TPAAPGPGGGAAVPSGATPHPERGSGPADPPAAARLPPERQEPRLPQDLAAAQ-RCPAGP 252

Query: 91  PQPR 80
           P  R
Sbjct: 253 PPTR 256

 Score = 40.4 bits (93), Expect = 0.032
 Identities = 74/275 (26%), Positives = 82/275 (28%), Gaps = 54/275 (19%)
 Frame = +3

Query: 48  GRERQWQRQRC--RGCGGPAEEEARGAAAGAAQVGLRAAGARRAAGGGEDLPPPAAAALH 221
           G  R W+R+    RG   P   +      G       A G   A G G     P+ A  H
Sbjct: 154 GCPRTWRRRSGAQRGHPPPGAGQRPSGPTGGRPAAPGAPGTPAAPGPGGGAAVPSGATPH 213

Query: 222 AVRVLQAAHPVHDAHGAPQ----------AAAH---AAHHPVRIPVPDQRPLRDRPAAVP 362
             R    A P   A   P+          AAA    A   P R     QR  R RP   P
Sbjct: 214 PERGSGPADPPAAARLPPERQEPRLPQDLAAAQRCPAGPPPTRSGAAAQRTHR-RPPGCP 272

Query: 363 V------------HRSGHQR--------QRPRGLRRVHPHRDLGAGGLAGRRERGGAGDA 482
                         RSG QR        QRP G     P      G  A     GGA   
Sbjct: 273 RSARNPGCPRTWRRRSGAQRGHPPPGAGQRPSGPTGGRPAAPGAPGTPAAPGPGGGAAVP 332

Query: 483 PHAAPRPDAG-------RVRPLPPGHPARQRAAGGAGQQDSQCGHAELRDGEPGVRPH-- 635
             A P P+ G           LPP     +     A  Q    G    R G    R H  
Sbjct: 333 SGATPHPERGSGPADPPAAARLPPERQEPRLPQDLAAAQRCPAGPPPTRSGAAAQRTHRR 392

Query: 636 GDGAPRRTRG-------HERRG---GHGPAGGGER 710
             G PR  R          R G   GH P G G+R
Sbjct: 393 PPGCPRSARNPGCPRTWRRRSGAQRGHPPPGAGQR 427

 Score = 36.2 bits (82), Expect = 0.60
 Identities = 69/258 (26%), Positives = 76/258 (28%), Gaps = 46/258 (17%)
 Frame = +3

Query: 27   GCRRGGS--GRERQWQRQRC--RGCGGPAEEEARGAAAGAAQVGLRAAGARRAAGGGEDL 194
            GC R     G  R W+R+    RG   P   +      G       A G   A G G   
Sbjct: 395  GCPRSARNPGCPRTWRRRSGAQRGHPPPGAGQRPSGPTGGRPAAPGAPGTPAAPGPGGGA 454

Query: 195  PPPAAAALHAVRVLQAAHPVHDAHGAPQ----------AAAH---AAHHPVRIPVPDQRP 335
              P+ A  H  R    A P   A   P+          AAA    A   P R     QR 
Sbjct: 455  AVPSGATPHPERGSGPADPPAAARLPPERQEPRLPQDLAAAQRCPAGPPPTRSGAAAQRT 514

Query: 336  LRDRPAAVPV------------HRSGHQR--------QRPRGLRRVHPHRDLGAGGLAGR 455
             R RP   P              RSG QR        QRP G     P      G  A  
Sbjct: 515  HR-RPPGCPRSARNPGCPRTWRRRSGAQRGHPPPGAGQRPSGPTGGRPAAPGAPGTPAAP 573

Query: 456  RERGGAGDAPHAAPRPDAG-------RVRPLPPGHPARQRAAGGAGQQDSQCGHAELRDG 614
               GGA     A P P+ G           LPP     +     A  Q    G    R G
Sbjct: 574  GPGGGAAVPSGATPHPERGSGPADPPAAARLPPERQEPRLPQDLAAAQRCPAGPPPTRSG 633

Query: 615  EPGVRPH--GDGAPRRTR 662
                R H    G PR  R
Sbjct: 634  AAAQRTHRRPPGCPRSAR 651

>ref|ZP_00092697.1| COG1020: Non-ribosomal peptide synthetase modules and related
            proteins [Azotobacter vinelandii]
          Length = 4332

 Score = 63.9 bits (154), Expect = 3e-09
 Identities = 92/276 (33%), Positives = 100/276 (35%), Gaps = 25/276 (9%)
 Frame = +3

Query: 6    AAAAAASGCRRGGSGRERQWQRQRCRGCGG------PAEEEARGAAAGAAQVGLRAAGAR 167
            AAA  A+  RR G G      R++  G GG      PA     G  A      LRAA A 
Sbjct: 1317 AAAEGAARLRRVGLGMLPAADRRQPPGAGGGWRAPRPAPAGGTGTGARGDLPALRAAAAA 1376

Query: 168  --RAAGGGEDLPPPAAAALHAVRVLQAAHPVHDAHGAPQAAAHAAHHPVRIPVP-DQR-P 335
              R   G   LPPP AA L     L+ A P     GA  AAA  A  P+R     DQR P
Sbjct: 1377 TVRRGTGARRLPPPQAAVLRRRGALRRAVPA----GARTAAAGRAAQPLRADRDGDQRHP 1432

Query: 336  LRDRPAAVPVHRSGHQRQR--PRGLRRVHPHRDLGA----GGLAGRRER-----GGAGDA 482
            L  R       R+G  R     RGLR        GA    G  A RR+R      GA  A
Sbjct: 1433 LALRGRG----RAGADRPAVGQRGLRAARRRTGTGARRRGGRTAARRQRPGARLSGASGA 1488

Query: 483  PHAAPRPDAGRVRPLPPGHPARQRAAGGAGQQDSQCGHAELRDGEPGVRPHGDGAPRRTR 662
               A R   GR   +P   P       GAG           R GE    PH  G   R  
Sbjct: 1489 DRRALRAGRGRRAAVPQRRPGALAGRRGAG-----IPRPRRRAGESARFPHRTGGNPRAP 1543

Query: 663  GHERRGGHG-PAGGGERAGSLHAHL---RLRLRRGG 758
                 G  G  AG   R G     L   R R RR G
Sbjct: 1544 AVAAGGAPGRGAGARGRRGCATGRLPDQRRRTRRSG 1579

 Score = 56.6 bits (135), Expect = 4e-07
 Identities = 84/264 (31%), Positives = 95/264 (35%), Gaps = 8/264 (3%)
 Frame = +3

Query: 3    VAAAAAASGCRRGGSGRERQWQRQRCRGCGGPAEEEARGAAAGAAQVGLRAAGARRAAGG 182
            V  A A    RR  +  +RQ   Q   G G      A G    +A+    A G   A G 
Sbjct: 1595 VHGAGAVRPPRRAAADADRQAGSQGAAGAG-----LAGGRIRRSARRARTAPGGDLAGGA 1649

Query: 183  GEDLPPPAAAALHAVRVLQAAHPVHDAHGAPQAAAH-AAHHPVRIPVPDQRPLRDRPAAV 359
            G     P    L   R   A HP H   GAP      AA  PVR     Q P R R    
Sbjct: 1650 GLAARRPGRRLLRPGRPFAAGHP-HRLAGAPGVRPRPAAAQPVR----SQPPRRVR---- 1700

Query: 360  PVHRSGHQRQRPRGLRRVHPHRDLGAGGLAGRRERGGAGDAPHAAPRPDAGRVRPLP--P 533
               RSG    R R        R LG       R+R G     H A    A  V PL   P
Sbjct: 1701 --RRSGPPAGRGRA-------RRLG-------RDRAGGSWPTHPAVAFPAAHVVPLAARP 1744

Query: 534  GHPARQRAAGGAGQQDSQCGHAELRDGEPGVRPHGDGAPRRTRGH-ERRGGHGPAGGGER 710
              P  QR   GA ++ ++C  A LRDG  G  P    APR    H  +R     A GG  
Sbjct: 1745 AEPGLQRRRHGAAERAARC--ATLRDGPAGADP----APRDPAHHLPQRRRQALAAGGRA 1798

Query: 711  AGSLHAHLRLRLRRG----GADAG 770
               +HA     L  G    GA AG
Sbjct: 1799 IRPVHAAAGPVLAAGRPAPGAPAG 1822

 Score = 52.8 bits (125), Expect = 6e-06
 Identities = 79/256 (30%), Positives = 94/256 (35%), Gaps = 14/256 (5%)
 Frame = -3

Query: 760  APPRRSRRRR*AWSEPAR------SPPPAGPCP--PRRSWPRVRRGAPSPCGRTPGSPSR 605
            A P   RRR  A    AR       P  A P P  P    P+ RR A +  GR    P  
Sbjct: 1745 AEPGLQRRRHGAAERAARCATLRDGPAGADPAPRDPAHHLPQRRRQALAAGGRAI-RPVH 1803

Query: 604  SSACPHWESCWPAPPAARCRAGWPGGSGRTR--PASGRGAACGASPAPPRSRR----PAS 443
            ++A P   +  PAP       G P G+GR    PA   GA   A+  P + RR    P  
Sbjct: 1804 AAAGPVLAAGRPAP-------GAPAGTGRRAGAPALRPGARAAAARVPGKGRRTQALPGG 1856

Query: 442  PPAPRSR*GWTRRSPRGRCR*CPERWTGTAAGRSRSGR*SGTGIRTG*CAA*AAA*GAPC 263
             PAP       RR   GR R    R  G   G  R  R +   +                
Sbjct: 1857 DPAPHRH----RRLGDGRVR---PRTGGALRGVPRRARIASGSL---------------- 1893

Query: 262  ASWTGWAACRTRTA*SAAAAGGGRSSPPPAARLAPAARSPTCAAPAAAPRASSSAGPPQP 83
                  A   +R    AA   GGR +P P ARL   A     +A  AA R S+SAG    
Sbjct: 1894 ------AGAVSRLQPVAAPLAGGRRAPAP-ARLLETAVGRRASAARAARRPSASAGAEPS 1946

Query: 82   RHRCRCHCRSRPLPPR 35
            R       R+ PL PR
Sbjct: 1947 R-------RAVPLRPR 1955

 Score = 49.7 bits (117), Expect = 5e-05
 Identities = 86/281 (30%), Positives = 97/281 (33%), Gaps = 29/281 (10%)
 Frame = +3

Query: 9    AAAAASGCRRGGSGRERQWQRQRCRGCGGPAEEEARGAAAGAAQVGLRAAGARRAAGGGE 188
            AA  A+  RR   GR          G G P +      AAG      R AG R A  G  
Sbjct: 976  AAGFAADLRRAAGGRA-------AHGRGRPGQPGPAVRAAG------RGAGRRAAVRG-- 1020

Query: 189  DLPPPAA----------AALHAVRVLQAAHPVHDA----HGAPQAAAHAAHHPVRIPVPD 326
            D+ PPAA          AA     + Q    V  A     G P A        +R     
Sbjct: 1021 DVQPPAARPGSAAPPAGAARRGTALAQPRGQVRPATAQRGGPPGAYPPVFRLRLRTVRAR 1080

Query: 327  QRPLRDRPAAVPV------HRSGHQRQRPRGLRRVHPHRDLGA-GGLAGRR------ERG 467
            QR    R    P        R+ H+R R    RR      LGA  G  GRR      +R 
Sbjct: 1081 QRRASRRAFRAPAGTDRREPRARHRRLRAARCRRAPATARLGARAGRTGRRPAARIADRP 1140

Query: 468  GAGDAPHAAPRPDAGRVRPLPPGHPARQRAAGGAGQQDSQCGHAELRDGEPGVRPHGDGA 647
            G GDA    P    G  R   PG P +   A  A                 G RP G+G 
Sbjct: 1141 GTGDAAGHRPGQWRGDPRLHRPGAPRQPPGAPPA---------------RAGRRPGGEGR 1185

Query: 648  PR-RTRGHERRGGHGPAGGGERAGSLHAH-LRLRLRRGGAD 764
            P  RTR   RR   G AGGG+    L A   RL  R  G D
Sbjct: 1186 PAGRTR---RRTDGGSAGGGQGRRRLRADGRRLPARTPGLD 1223

 Score = 48.1 bits (113), Expect = 2e-04
 Identities = 72/233 (30%), Positives = 81/233 (33%), Gaps = 13/233 (5%)
 Frame = +3

Query: 51   RERQWQRQRCRGCGGPAEEEARGAAAGAAQVGLRAAGARRAAGGGEDLPPPAAAALHAVR 230
            R+R+  R+  R   G    E R     A    LRAA  RRA         PA A L A  
Sbjct: 1080 RQRRASRRAFRAPAGTDRREPR-----ARHRRLRAARCRRA---------PATARLGARA 1125

Query: 231  VLQAAHP---VHDAHGAPQAAAHAAHHPVRIPVPDQRPLRDRPAAVPVHRSGHQ---RQR 392
                  P   + D  G   AA H        P   +     +P   P  R+G +     R
Sbjct: 1126 GRTGRRPAARIADRPGTGDAAGHRPGQWRGDPRLHRPGAPRQPPGAPPARAGRRPGGEGR 1185

Query: 393  PRGLRRVHPHRDLGAGGLAGRRERGGAGDAPHAAPRPDAGRVRPLP-PGHPARQRAAGGA 569
            P G  R         GG   RR R      P   P  D  R RP P  G PA    AG A
Sbjct: 1186 PAGRTRRRTDGGSAGGGQGRRRLRADGRRLPARTPGLDDRRQRPEPAAGPPAGAGRAGSA 1245

Query: 570  GQQDSQCGHAELRDGEPG--VRPHGDGAPRRTRG----HERRGGHGPAGGGER 710
            G+          R G PG   RP   GA RR  G    H R   H PA G  R
Sbjct: 1246 GRTGDAASGGAGRRGLPGHAARP---GAGRRQPGLRDLHLRL--HRPAQGRRR 1293

 Score = 43.9 bits (102), Expect = 0.003
 Identities = 54/163 (33%), Positives = 65/163 (39%), Gaps = 10/163 (6%)
 Frame = +3

Query: 291  AAHHPVRIP---VPDQRPLRDRPAAVPVHRSGHQRQRPRGL---RRVHPHRDLG-AGGLA 449
            A HH VR P   +PD      R    P  R+  Q   PR     R +H +     A G A
Sbjct: 921  AGHHAVRGPPGGLPDPAAPLYRAIRHPPRRAQRQPPAPRVAGTGRLLHQYPGAARAAGFA 980

Query: 450  GRRERGGAGDAPHAAPRPDAGRVRPLPPGHPARQRAAGGAGQQDSQCGHAELRDGEPGVR 629
                R   G A H       GR RP  PG PA + A  GAG++ +  G  +     PG  
Sbjct: 981  ADLRRAAGGRAAH-------GRGRPGQPG-PAVRAAGRGAGRRAAVRGDVQPPAARPGSA 1032

Query: 630  PHGDGAPRR-TRGHERRGGHGPAGG--GERAGSLHAHLRLRLR 749
                GA RR T   + RG   PA    G   G+     RLRLR
Sbjct: 1033 APPAGAARRGTALAQPRGQVRPATAQRGGPPGAYPPVFRLRLR 1075

 Score = 41.2 bits (95), Expect = 0.019
 Identities = 87/298 (29%), Positives = 106/298 (35%), Gaps = 45/298 (15%)
 Frame = -3

Query: 763  SAPPRRSRR-----RR*AWSEPARSPP-----PAGPC------PPRRSWPRVRRGAPSPC 632
            SAP +  RR     R+ A     R PP     PA P       PPRR+    +R  P+P 
Sbjct: 904  SAPGQGPRRTPAGHRQGAGHHAVRGPPGGLPDPAAPLYRAIRHPPRRA----QRQPPAP- 958

Query: 631  GRTPGSPSRSSACPHWESCWPAPPAARCRAGWPGGSGRTRP--------ASGRGAACGAS 476
             R  G+       P            R  AG     GR RP        A+GRGA   A+
Sbjct: 959  -RVAGTGRLLHQYPGAARAAGFAADLRRAAGGRAAHGRGRPGQPGPAVRAAGRGAGRRAA 1017

Query: 475  ---PAPPRSRRP--ASPPAPRSR*GWTRRSPRGRCR*CPERWTGTAAG------------ 347
                  P + RP  A+PPA  +R G     PRG+ R    +  G                
Sbjct: 1018 VRGDVQPPAARPGSAAPPAGAARRGTALAQPRGQVRPATAQRGGPPGAYPPVFRLRLRTV 1077

Query: 346  RSRSGR*SGTGIRTG*CAA*AAA*GAPCASWTGWAACRTRTA*SAAAAG--GGRSSPPPA 173
            R+R  R S    R    A        P A      A R R A + A  G   GR+   PA
Sbjct: 1078 RARQRRASRRAFR----APAGTDRREPRARHRRLRAARCRRAPATARLGARAGRTGRRPA 1133

Query: 172  ARLAPAARSPTCAAPAAAPRASSSAG--PPQPRHRCRCHCRSRPLPPRRQPLAAAAAA 5
            AR+A              P    +AG  P Q R   R H   RP  PR+ P A  A A
Sbjct: 1134 ARIAD------------RPGTGDAAGHRPGQWRGDPRLH---RPGAPRQPPGAPPARA 1176

 Score = 40.8 bits (94), Expect = 0.025
 Identities = 81/278 (29%), Positives = 97/278 (34%), Gaps = 29/278 (10%)
 Frame = -3

Query: 751  RRSRRRR*AWSEPARSPPPAGPCPPRRSWPRVRR-------GAPSPCGRTPGSPSRSSAC 593
            RRS RR  A + P            RR   R+ R       G P      PG   R +A 
Sbjct: 1631 RRSARR--ARTAPGGDLAGGAGLAARRPGRRLLRPGRPFAAGHPHRLAGAPGVRPRPAAA 1688

Query: 592  PHWESCWPAPPAARCRAGWPGGSGRTRPASGRGAACGASPAPPR-----------SRRPA 446
                S    P   R R+G P G GR R   GR  A G+ P  P            + RPA
Sbjct: 1689 QPVRS--QPPRRVRRRSGPPAGRGRAR-RLGRDRAGGSWPTHPAVAFPAAHVVPLAARPA 1745

Query: 445  SPPAPRSR*GWTRRSPRGRCR*CPERWTGTAAGRSRSGR*SGTGIRTG*CAA*AAA*GA- 269
             P   R R G   R+ R     C     G  AG   + R     +      A AA   A 
Sbjct: 1746 EPGLQRRRHGAAERAAR-----CATLRDG-PAGADPAPRDPAHHLPQRRRQALAAGGRAI 1799

Query: 268  -PCASWTGWAACRTRTA*SAAAAGGGRSSPPPAARLAPAARSPTCAAPAAAPRASSSAG- 95
             P  +  G      R A   A AG GR +  PA R  P AR+     P    R  +  G 
Sbjct: 1800 RPVHAAAGPVLAAGRPA-PGAPAGTGRRAGAPALR--PGARAAAARVPGKGRRTQALPGG 1856

Query: 94   -PPQPRHRCRCHCRSRPLP-------PRRQPLAAAAAA 5
             P   RHR     R RP         PRR  +A+ + A
Sbjct: 1857 DPAPHRHRRLGDGRVRPRTGGALRGVPRRARIASGSLA 1894

 Score = 40.0 bits (92), Expect = 0.042
 Identities = 72/242 (29%), Positives = 82/242 (33%), Gaps = 12/242 (4%)
 Frame = +3

Query: 15   AAASGCRRGGSGRERQW--------QRQRCRGCGGPAEEEARGAAAGAAQVGLRAAGARR 170
            A A+  R  G GR  Q          R R  G  G       GA  G  +    A+G+  
Sbjct: 1836 ARAAAARVPGKGRRTQALPGGDPAPHRHRRLG-DGRVRPRTGGALRGVPRRARIASGS-- 1892

Query: 171  AAGGGEDLPPPAAAALHAVRVLQAAHPVHDAHGAPQAAAHAAHHPVRIPVPDQRPLRDRP 350
             AG    L P AA      R    A  +  A G   +AA AA  P      +  P R   
Sbjct: 1893 LAGAVSRLQPVAAPLAGGRRAPAPARLLETAVGRRASAARAARRPSASAGAE--PSR--- 1947

Query: 351  AAVPVHRSGHQRQRPRGLRRVHPHRDLGAGGLAGRRERGGAGDAPH-AAPRPDAGRVRPL 527
             AVP+        RPR           GAG    R ERG   D  H    RP A  V   
Sbjct: 1948 RAVPL--------RPRA----------GAGRAGARLERGPRPDHVHDRHRRPGAAAVPLQ 1989

Query: 528  PPGHPARQRAAGGAGQQDSQCGHAELRDGEPGVR-PHG--DGAPRRTRGHERRGGHGPAG 698
              G PA +R AGG      + G        PG   P G  D   R  R   R G  GP  
Sbjct: 1990 RTGRPAHRR-AGGQSHPPGKRGTDRCLPQHPGAALPAGRADERRRTARTGTRHGDRGPGP 2048

Query: 699  GG 704
             G
Sbjct: 2049 PG 2050

 Score = 39.3 bits (90), Expect = 0.071
 Identities = 84/289 (29%), Positives = 94/289 (32%), Gaps = 34/289 (11%)
 Frame = +3

Query: 6    AAAAAASGCRRGGSGRERQWQRQRCRGCGGPAEEEARGAAAGAAQVGLRAAGARRAA--- 176
            A  AAA+   R G+G  R    Q        A    RGA   A   G R A A RAA   
Sbjct: 1369 ALRAAAAATVRRGTGARRLPPPQA-------AVLRRRGALRRAVPAGARTAAAGRAAQPL 1421

Query: 177  GGGEDLPPPAAAALHAVRVLQAAHPVHDAHGAPQAAAHAAHHPVRIPVPDQRPLRDRPAA 356
                D       AL       A  P     G  +AA        R         R RP A
Sbjct: 1422 RADRDGDQRHPLALRGRGRAGADRPAVGQRGL-RAARRRTGTGARRRGGRTAARRQRPGA 1480

Query: 357  VPVHRSGHQR---QRPRGLRRVHPHRDLGAGGLAGRRERG------GAGDAPHAAPRPDA 509
                 SG  R   +  RG R   P R  GA  LAGRR  G       AG++     R   
Sbjct: 1481 RLSGASGADRRALRAGRGRRAAVPQRRPGA--LAGRRGAGIPRPRRRAGESARFPHRTGG 1538

Query: 510  GRVRPLPPGHPARQRAAGGAGQQDSQCG-----HAELRDGEPGVRP-----------HGD 641
                P      A  R AG  G++    G         R   PG  P           HG 
Sbjct: 1539 NPRAPAVAAGGAPGRGAGARGRRGCATGRLPDQRRRTRRSGPGRTPQARPGRQPAGVHGA 1598

Query: 642  GA---PRRTRGHERR--GGHGPAGGGERAGSL-HAHLRLRLRRGGADAG 770
            GA   PRR      R  G  G AG G   G +  +  R R   GG  AG
Sbjct: 1599 GAVRPPRRAAADADRQAGSQGAAGAGLAGGRIRRSARRARTAPGGDLAG 1647

 Score = 36.2 bits (82), Expect = 0.60
 Identities = 64/212 (30%), Positives = 74/212 (34%), Gaps = 4/212 (1%)
 Frame = -3

Query: 655  RRGAPSPCGRTPGSPSRSSACPHWESCWPAPPAARCRAGWPGGSGRTRPASGR-GAACGA 479
            RRGA  P  R       S+  PH     P  PA    AG  G  GR   A GR G A G 
Sbjct: 1514 RRGAGIP--RPRRRAGESARFPHRTGGNPRAPAVA--AG--GAPGRGAGARGRRGCATGR 1567

Query: 478  SPAPPRSRRPASPP-APRSR*GWTRRSPRGRCR*CPERWTGTAAGRSRSGR*S-GTGIRT 305
             P   R  R + P   P++R G       G     P R     A R    + + G G+  
Sbjct: 1568 LPDQRRRTRRSGPGRTPQARPGRQPAGVHGAGAVRPPRRAAADADRQAGSQGAAGAGLAG 1627

Query: 304  G*CAA*AAA*GAPCASWTGWAACRTRTA*SAAAAGG-GRSSPPPAARLAPAARSPTCAAP 128
            G                   +A R RTA     AGG G ++  P  RL    R      P
Sbjct: 1628 GRIRR---------------SARRARTAPGGDLAGGAGLAARRPGRRLLRPGR------P 1666

Query: 127  AAAPRASSSAGPPQPRHRCRCHCRSRPLPPRR 32
             AA      AG P  R R       R  PPRR
Sbjct: 1667 FAAGHPHRLAGAPGVRPRPAAAQPVRSQPPRR 1698

 Score = 35.4 bits (80), Expect(2) = 0.15
 Identities = 70/253 (27%), Positives = 82/253 (31%), Gaps = 45/253 (17%)
 Frame = -3

Query: 766  ASAPPRRSRRRR*AWSEP--------ARSPPPAGPCPP----------RRSWPRVRRGAP 641
            ++APP  + RR  A ++P        A+   P G  PP           R     RR   
Sbjct: 1031 SAAPPAGAARRGTALAQPRGQVRPATAQRGGPPGAYPPVFRLRLRTVRARQRRASRRAFR 1090

Query: 640  SPCGRTPGSPSRSSACPHWESCWPAPPAAR--CRAGWPGGSGRTRPAS--GRGAACGASP 473
            +P G     P           C  AP  AR   RAG  G     R A   G G A G  P
Sbjct: 1091 APAGTDRREPRARHRRLRAARCRRAPATARLGARAGRTGRRPAARIADRPGTGDAAGHRP 1150

Query: 472  AP----PRSRRPASP-------PAPRSR*GWTRRSPRGRCR*CPERWTGTAAG------- 347
                  PR  RP +P       PA   R       P GR R    R  G +AG       
Sbjct: 1151 GQWRGDPRLHRPGAPRQPPGAPPARAGRRPGGEGRPAGRTR---RRTDGGSAGGGQGRRR 1207

Query: 346  -----RSRSGR*SGTGIRTG*CAA*AAA*GAPCASWTGWAACRTRTA*SAAAAGGGRSSP 182
                 R    R  G   R         A G P  +  G A    RT  +A+   G R  P
Sbjct: 1208 LRADGRRLPARTPGLDDRR---QRPEPAAGPPAGA--GRAGSAGRTGDAASGGAGRRGLP 1262

Query: 181  PPAARLAPAARSP 143
              AAR     R P
Sbjct: 1263 GHAARPGAGRRQP 1275

 Score = 21.6 bits (44), Expect(2) = 0.15
 Identities = 13/38 (34%), Positives = 16/38 (41%)
 Frame = -2

Query: 122  RTACFFFSGPSTAAAPLPLPLPFTPAAAAAAAAGSGGG 9
            R  CF  +    AA    + L   PAA      G+GGG
Sbjct: 1310 RPGCFRRAAAEGAARLRRVGLGMLPAADRRQPPGAGGG 1347



EST assemble image


clone accession position
1 MXL069a02_r BP097034 1 380
2 HCL052h10_r AV642501 135 619
3 MXL017h02_r BP094078 399 777




Chlamydomonas reinhardtii
Kazusa DNA Research Institute