Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC002531A_C01 KCC002531A_c01
(738 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_849294.1| RNA-binding protein, putative [Arabidopsis thal... 67 3e-10
pir||T01382 ribonucleoprotein homolog T4I9.1 - Arabidopsis thali... 67 3e-10
ref|NP_567249.1| RNA-binding protein, putative [Arabidopsis thal... 67 3e-10
pir||B86166 protein F21B7.8 [imported] - Arabidopsis thaliana gi... 66 6e-10
pir||T00912 ribonucleoprotein homolog F21B7.26 - Arabidopsis tha... 66 6e-10
>ref|NP_849294.1| RNA-binding protein, putative [Arabidopsis thaliana]
gi|17529054|gb|AAL38737.1| putative ribonucleoprotein
[Arabidopsis thaliana]
Length = 439
Score = 67.0 bits (162), Expect = 3e-10
Identities = 37/130 (28%), Positives = 68/130 (51%), Gaps = 11/130 (8%)
Frame = +1
Query: 244 DDPVNQDNRQLFFAKVLRSATEEEVRMLFGQFGKVTDVNLFRAFQCAPTTKGCGLVTMGT 423
D + + +LF + ++ +E EV+ LF ++G + D+ + R Q T+KGC + T
Sbjct: 98 DGELERLEHKLFVGMLPKNVSEAEVQSLFSKYGTIKDLQILRGAQ--QTSKGCAFLKYET 155
Query: 424 HTEAVSAIAALDNQYVWEGMETPMVVKWMDMALQRRRR-----EQHLANM------RQAM 570
+AVSA+ +++ ++ EG P+VVKW D +R R + H+A + ++
Sbjct: 156 KEQAVSAMESINGKHKMEGSTVPLVVKWADTERERHTRRLQKAQSHIARLGNGDPTNPSL 215
Query: 571 AGGAGLGFVP 600
G +G+VP
Sbjct: 216 FGALPMGYVP 225
>pir||T01382 ribonucleoprotein homolog T4I9.1 - Arabidopsis thaliana
gi|3924594|gb|AAC79095.1| putative ribonucleoprotein
[Arabidopsis thaliana] gi|4262139|gb|AAD14439.1|
putative ribonucleoprotein [Arabidopsis thaliana]
gi|7270181|emb|CAB77796.1| putative ribonucleoprotein
[Arabidopsis thaliana]
Length = 492
Score = 67.0 bits (162), Expect = 3e-10
Identities = 37/130 (28%), Positives = 68/130 (51%), Gaps = 11/130 (8%)
Frame = +1
Query: 244 DDPVNQDNRQLFFAKVLRSATEEEVRMLFGQFGKVTDVNLFRAFQCAPTTKGCGLVTMGT 423
D + + +LF + ++ +E EV+ LF ++G + D+ + R Q T+KGC + T
Sbjct: 98 DGELERLEHKLFVGMLPKNVSEAEVQSLFSKYGTIKDLQILRGAQ--QTSKGCAFLKYET 155
Query: 424 HTEAVSAIAALDNQYVWEGMETPMVVKWMDMALQRRRR-----EQHLANM------RQAM 570
+AVSA+ +++ ++ EG P+VVKW D +R R + H+A + ++
Sbjct: 156 KEQAVSAMESINGKHKMEGSTVPLVVKWADTERERHTRRLQKAQSHIARLGNGDPTNPSL 215
Query: 571 AGGAGLGFVP 600
G +G+VP
Sbjct: 216 FGALPMGYVP 225
>ref|NP_567249.1| RNA-binding protein, putative [Arabidopsis thaliana]
gi|21536899|gb|AAM61231.1| putative ribonucleoprotein
[Arabidopsis thaliana]
Length = 441
Score = 67.0 bits (162), Expect = 3e-10
Identities = 37/130 (28%), Positives = 68/130 (51%), Gaps = 11/130 (8%)
Frame = +1
Query: 244 DDPVNQDNRQLFFAKVLRSATEEEVRMLFGQFGKVTDVNLFRAFQCAPTTKGCGLVTMGT 423
D + + +LF + ++ +E EV+ LF ++G + D+ + R Q T+KGC + T
Sbjct: 98 DGELERLEHKLFVGMLPKNVSEAEVQSLFSKYGTIKDLQILRGAQ--QTSKGCAFLKYET 155
Query: 424 HTEAVSAIAALDNQYVWEGMETPMVVKWMDMALQRRRR-----EQHLANM------RQAM 570
+AVSA+ +++ ++ EG P+VVKW D +R R + H+A + ++
Sbjct: 156 KEQAVSAMESINGKHKMEGSTVPLVVKWADTERERHTRRLQKAQSHIARLGNGDPTNPSL 215
Query: 571 AGGAGLGFVP 600
G +G+VP
Sbjct: 216 FGALPMGYVP 225
>pir||B86166 protein F21B7.8 [imported] - Arabidopsis thaliana
gi|9280669|gb|AAF86538.1|AC002560_31 F21B7.8
[Arabidopsis thaliana]
Length = 440
Score = 65.9 bits (159), Expect = 6e-10
Identities = 44/158 (27%), Positives = 82/158 (51%), Gaps = 10/158 (6%)
Frame = +1
Query: 157 AFRDGNTFEGDELSPGELLAAQGPSRA--VLDDPVNQDNRQLFFAKVLRSATEEEVRMLF 330
+F + T G SP ++ A G VLD N +++ LF + ++ +E EV+ LF
Sbjct: 67 SFHNKKTLPGAS-SPLQVKYADGELERLDVLDCSCNPEHK-LFVGMLPKNVSETEVQSLF 124
Query: 331 GQFGKVTDVNLFRAFQCAPTTKGCGLVTMGTHTEAVSAIAALDNQYVWEGMETPMVVKWM 510
++G + D+ + R T+KGC + + +AV+A+ AL+ +++ EG P++VKW
Sbjct: 125 SEYGTIKDLQILRG--SLQTSKGCLFLKYESKEQAVAAMEALNGRHIMEGANVPLIVKWA 182
Query: 511 DMALQRRRR-----EQHLANM---RQAMAGGAGLGFVP 600
D +R+ R + H++ + +M G + +VP
Sbjct: 183 DTEKERQARRLLKVQSHVSRLDPQNPSMFGALPMSYVP 220
>pir||T00912 ribonucleoprotein homolog F21B7.26 - Arabidopsis thaliana
Length = 395
Score = 65.9 bits (159), Expect = 6e-10
Identities = 44/158 (27%), Positives = 82/158 (51%), Gaps = 10/158 (6%)
Frame = +1
Query: 157 AFRDGNTFEGDELSPGELLAAQGPSRA--VLDDPVNQDNRQLFFAKVLRSATEEEVRMLF 330
+F + T G SP ++ A G VLD N +++ LF + ++ +E EV+ LF
Sbjct: 72 SFHNKKTLPGAS-SPLQVKYADGELERLDVLDCSCNPEHK-LFVGMLPKNVSETEVQSLF 129
Query: 331 GQFGKVTDVNLFRAFQCAPTTKGCGLVTMGTHTEAVSAIAALDNQYVWEGMETPMVVKWM 510
++G + D+ + R T+KGC + + +AV+A+ AL+ +++ EG P++VKW
Sbjct: 130 SEYGTIKDLQILRG--SLQTSKGCLFLKYESKEQAVAAMEALNGRHIMEGANVPLIVKWA 187
Query: 511 DMALQRRRR-----EQHLANM---RQAMAGGAGLGFVP 600
D +R+ R + H++ + +M G + +VP
Sbjct: 188 DTEKERQARRLLKVQSHVSRLDPQNPSMFGALPMSYVP 225
