Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC002519A_C01 KCC002519A_c01
(965 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_787080.1| hypothetical protein FLJ36031 [Homo sapiens] gi... 43 0.007
gb|AAM08777.1|AC016780_7 Putative retroelement [Oryza sativa] 42 0.016
ref|XP_311331.1| ENSANGP00000001657 [Anopheles gambiae] gi|30177... 42 0.020
emb|CAE02138.1| OSJNBa0074L08.6 [Oryza sativa (japonica cultivar... 41 0.027
dbj|BAB86572.1| OSJNBb0032K15.13 [Oryza sativa (japonica cultiva... 40 0.045
>ref|NP_787080.1| hypothetical protein FLJ36031 [Homo sapiens]
gi|21752199|dbj|BAC04142.1| unnamed protein product
[Homo sapiens]
Length = 231
Score = 43.1 bits (100), Expect = 0.007
Identities = 27/52 (51%), Positives = 30/52 (56%), Gaps = 3/52 (5%)
Frame = -1
Query: 761 RPVVPPAPSACTATTEARRP--RSDARFCAPSAVDATARR-KPAPPPPRPPP 615
R +VP P TA +ARRP R+ AR A A ARR KP PPPP PPP
Sbjct: 101 RALVPDPPGPPTARGQARRPVPRAAARRRRRGARAAAARRRKPRPPPPPPPP 152
>gb|AAM08777.1|AC016780_7 Putative retroelement [Oryza sativa]
Length = 779
Score = 42.0 bits (97), Expect = 0.016
Identities = 26/72 (36%), Positives = 34/72 (47%)
Frame = -1
Query: 794 SGRGFRRLNGTRPVVPPAPSACTATTEARRPRSDARFCAPSAVDATARRKPAPPPPRPPP 615
+G RR+ +RP PP P C+ +T AR P+ R P PPPP PPP
Sbjct: 513 TGVATRRVVPSRPPPPPPPQNCSVSTAVA-----ARRVVPT-------RPPPPPPPPPPP 560
Query: 614 CMLPLAEGTAAA 579
+ + TAAA
Sbjct: 561 PQINYSVSTAAA 572
Score = 33.5 bits (75), Expect = 5.6
Identities = 26/83 (31%), Positives = 33/83 (39%), Gaps = 5/83 (6%)
Frame = -1
Query: 770 NGTRPVVPPAPSACTATTE-----ARRPRSDARFCAPSAVDATARRKPAPPPPRPPPCML 606
+G R PA SA A R P + + S AT R P+ PPP PPP
Sbjct: 475 SGARTAALPASSAHAAAARRVVRPTRPPPPPPQNFSVSTGVATRRVVPSRPPPPPPPQNC 534
Query: 605 PLAEGTAAARCIVQRRLVGSPGP 537
++ AA R + R P P
Sbjct: 535 SVSTAVAARRVVPTRPPPPPPPP 557
>ref|XP_311331.1| ENSANGP00000001657 [Anopheles gambiae] gi|30177813|gb|EAA06779.2|
ENSANGP00000001657 [Anopheles gambiae str. PEST]
Length = 283
Score = 41.6 bits (96), Expect = 0.020
Identities = 27/79 (34%), Positives = 41/79 (51%)
Frame = +2
Query: 728 CMQTGLVGPRAGCHSDAGNRGRTHCKG*CCGSCGTSRTTCAASRTTCAASRTACAASSRS 907
C + + C S A + T C CC S S ++CA+S ++CA+S ++CA+S S
Sbjct: 148 CCTSSCSSCASSCSSCASSSSTTSCS--CCAS---SSSSCASSCSSCASSCSSCASSCSS 202
Query: 908 RMDSLRHRASSSSRSWAAS 964
S ASS S S ++S
Sbjct: 203 GTTSSSSCASSCSSSTSSS 221
Score = 40.4 bits (93), Expect = 0.045
Identities = 23/81 (28%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Frame = +2
Query: 728 CMQTGLVGPRAGCHSD--AGNRGRTHCKG*CCGSCGTSRTTCAASRTTCAASRTACAASS 901
C T + C S +G+ G T C C SC + ++C+++ ++C++ T+C SS
Sbjct: 15 CCTTSCSSGTSSCSSSTSSGSSGTTSCSS-CTSSCSSGTSSCSSATSSCSSGTTSC-TSS 72
Query: 902 RSRMDSLRHRASSSSRSWAAS 964
S +S SS + S ++S
Sbjct: 73 TSSSNSCTSSCSSGTSSRSSS 93
Score = 38.1 bits (87), Expect = 0.23
Identities = 20/50 (40%), Positives = 31/50 (62%)
Frame = +2
Query: 815 CGSCGTSRTTCAASRTTCAASRTACAASSRSRMDSLRHRASSSSRSWAAS 964
C SC TS + C +S ++CA+S ++CA+SS + S +SSS S +S
Sbjct: 139 CSSCTTSCSCCTSSCSSCASSCSSCASSSSTTSCSCCASSSSSCASSCSS 188
Score = 37.7 bits (86), Expect = 0.29
Identities = 26/81 (32%), Positives = 39/81 (48%), Gaps = 5/81 (6%)
Frame = +2
Query: 737 TGLVGPRAGCHSDAGNRGRTHCKG*CCGSCGTSRTTCAASRTT-----CAASRTACAASS 901
+G R+G S + C C SC +S ++CA+S +T CA+S ++CA+S
Sbjct: 127 SGTSSCRSGTSSCSSCTTSCSCCTSSCSSCASSCSSCASSSSTTSCSCCASSSSSCASSC 186
Query: 902 RSRMDSLRHRASSSSRSWAAS 964
S S ASS S +S
Sbjct: 187 SSCASSCSSCASSCSSGTTSS 207
>emb|CAE02138.1| OSJNBa0074L08.6 [Oryza sativa (japonica cultivar-group)]
Length = 1645
Score = 41.2 bits (95), Expect = 0.027
Identities = 39/135 (28%), Positives = 54/135 (39%), Gaps = 7/135 (5%)
Frame = +3
Query: 528 RCSWTRRAHEAPLHDAASGGGAFCEGQHAWRRPRRWRRRFSSCSRVHGTRRAKSGVTPWT 707
R S ++R+++ GGG + W R+ ++ SR RR +
Sbjct: 158 RYSGSKRSYDFDRERRGGGGGGVDDDCD-------WERQGAAVSRPSPRRRTPERKRSGS 210
Query: 708 PSLCGGSACRRGWWDHGPGAIQTPETAAGPTA-KADAAEAAGHPER---RARHPEPRA-- 869
GGS RR G A P TA+G A + + P R RA P P A
Sbjct: 211 HERSGGSGSRRVSRSPGRRADSVPATASGERASRQQPGKMVSVPAREKGRAPSPVPAASG 270
Query: 870 -RHPEPRARHPAEAG 911
R+P PR+ PA AG
Sbjct: 271 KRYPSPRSNSPARAG 285
>dbj|BAB86572.1| OSJNBb0032K15.13 [Oryza sativa (japonica cultivar-group)]
Length = 313
Score = 40.4 bits (93), Expect = 0.045
Identities = 32/99 (32%), Positives = 41/99 (41%), Gaps = 3/99 (3%)
Frame = -1
Query: 818 RSISLCSGSGRGFRRLNGTRPVV--PPAPSACTATTEARRPRSDARFCAPSA-VDATARR 648
R +S + RRL +RP+ PP P + T + A F AP R
Sbjct: 187 REVSTLNRHPNRHRRLLRSRPLSQPPPPPPPSSLPTAIPTATAAASFSAPDRRCHRHCSR 246
Query: 647 KPAPPPPRPPPCMLPLAEGTAAARCIVQRRLVGSPGPRA 531
P+ PP PPP LP A +A A + R P PRA
Sbjct: 247 LPSQPPQPPPPLSLPTAVPSATATVSDRLRRSPPPFPRA 285
