KCC002518A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC002518A_C01 KCC002518A_c01
gcctgcggtggctaacacgtactactgcagcgccggcagcggccggcagcacgccggcgc
ggtgctttcagagcccaactTCCTGCGCGTGGACTGCTTGGGCTGCGACCGCAGCAGTGG
CTGCGGTGGCTTCCTTAAGGGCGTCCTCCTTAGACTCAAGCAGAGCGCAGCCGACCAGCA
GCTCTTTGCTGCCGCCATCACGCCCGTACCCAGCGACTCCTCCGCGGGTGCCATGGCGGA
CGGCATTCAGGACTTCATGCGGCGCCTGCCACGGGACCGTCTGAACTTCCTGCTGATCGA
CCAGGCGGAGAGCTTTTACCTGATGGCGCGGCCCGTGTCGGACAAATGTCCGCCGCGCGG
CTCAACCCTGGACGTGGACGCGGTGCTGCACATGCGGCGCATCCTCAAGGAACTCCTGCT
GCACAGCCCCCACTGGGTCGCCTGGGCCGTCACAGGCAGCAGCTCCATGGCGACGCTATG
GGCCAACGTTGCAGACACCCCGACCAACGGTTGGCCCCTGAGCATGCACCACCGCCGACT
CAACCTGAGCCCCACGGTGTCCACGGACGTGCTGCAAGTCGCTTGGAAGCAGCTCAAAGC
CCAGGCCGCGAACTGGGATCCGCCGCTGCCGAACGACCTGGTCTGGCGGTCGCCGCCGCA
GATCGCCACGCTTGCCTACTTGTGCCAGGAGTGGAGGTACAGCCGCACGGCTAGCACAGC
TGCGGAGCTGGTCGATCAAACCATGACGCA


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC002518A_C01 KCC002518A_c01
         (750 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|NP_523475.2| Salivary gland secretion 1 CG3047-PA [Drosophil...    52  1e-05
pir||T44768 antifreeze glycopeptide AFGP polyprotein precursor [...    50  3e-05
emb|CAC83675.1| mucin 5 [Homo sapiens]                                 49  8e-05
emb|CAB65669.1| glycoprotein G-2 [Human herpesvirus 2] gi|668835...    35  2e-04
emb|CAB65672.1| glycoprotein G-2 [Human herpesvirus 2]                 35  2e-04

>ref|NP_523475.2| Salivary gland secretion 1 CG3047-PA [Drosophila melanogaster]
           gi|28380257|gb|AAF50957.3| CG3047-PA [Drosophila
           melanogaster]
          Length = 1225

 Score = 51.6 bits (122), Expect = 1e-05
 Identities = 60/234 (25%), Positives = 84/234 (35%), Gaps = 6/234 (2%)
 Frame = +3

Query: 15  TRTTAAPAAAGSTPARCFQSPTSCAWTAWAATAAVAAVASLRASSLDSSRAQPTSSSLLP 194
           T TT       ST A    +P S   T  +         +   S+   +R  P S++   
Sbjct: 268 TTTTPRCTTTTSTCAPTTTTPRSTTTTTTSRPTTTTPRCTTTTSTCSPTRTTPRSTTTTS 327

Query: 195 PSRPYPATPPRVPWRTAFRTSCGACHGTV*TSC*STRRRAFT*WRGPCR--TNVRRAAQP 368
            SRP   TP               C  T  T+C  TRR   T  R      T+      P
Sbjct: 328 TSRPTTTTP--------------RCTTTPSTTC--TRRPTTTTPRSTTTTCTSGPTTTTP 371

Query: 369 WTWTRCCTCGASSRNSCCTAPTGSPGPS----QAAAPWRRYGPTLQTPRPTVGP*ACTTA 536
            + T  CT G ++     T  T + GP+    ++       GPT  TPR T      T+ 
Sbjct: 372 RSTTTTCTSGPTTTTPRSTTTTSTSGPTTTTPRSTTTTSTSGPTTTTPRSTTT--TSTSG 429

Query: 537 DST*APRCPRTCCKSLGSSSKPRPRTGIRRCRTTWSGGRRRRSPRLPTCARSGG 698
            +T  PR   T   S  +++ PR  T      TT + G    +PR  T   + G
Sbjct: 430 PTTTTPRSTTTTSTSGPTTTTPRSTT------TTSTSGPTTTTPRSTTTTSTSG 477

 Score = 47.4 bits (111), Expect = 2e-04
 Identities = 54/218 (24%), Positives = 80/218 (35%), Gaps = 2/218 (0%)
 Frame = +3

Query: 21   TTAAPAAAGSTPARC--FQSPTSCAWTAWAATAAVAAVASLRASSLDSSRAQPTSSSLLP 194
            TT  P +  +T   C    +P S   T  +        ++ + S+   +   P S++   
Sbjct: 895  TTTTPRSTTTTCTSCPTTTTPRSTTTTCTSGPTTTTPRSTTKTSTCAPTTTTPRSTTTTS 954

Query: 195  PSRPYPATPPRVPWRTAFRTSCGACHGTV*TSC*STRRRAFT*WRGPCRTNVRRAAQPWT 374
             SRP   TP      T  R +      T   +  ST R   T    P  T     ++P T
Sbjct: 955  TSRPTTTTPRSTTTTTTSRPTTTTPRST---TTPSTSRPTTT---TPRSTTTTSTSRPTT 1008

Query: 375  WTRCCTCGASSRNSCCTAPTGSPGPSQAAAPWRRYGPTLQTPRPTVGP*ACTTADST*AP 554
             T   T    ++ S C   T +P  +      R   PT  TPR T      T+  +T  P
Sbjct: 1009 TTPRST----TKTSTCAPTTTTPRSTTTTTTSR---PTTTTPRSTTT--TTTSRPTTTTP 1059

Query: 555  RCPRTCCKSLGSSSKPRPRTGIRRCRTTWSGGRRRRSP 668
            R   T C S  +++ PR  T     R T +  R   +P
Sbjct: 1060 RSTTTPCTSRPTTTTPRSTTTTTTSRPTTTTPRSTTTP 1097

 Score = 45.8 bits (107), Expect = 7e-04
 Identities = 51/208 (24%), Positives = 71/208 (33%)
 Frame = +3

Query: 15   TRTTAAPAAAGSTPARCFQSPTSCAWTAWAATAAVAAVASLRASSLDSSRAQPTSSSLLP 194
            T TT       ST      +P S   T+ +        ++   S+   +   P S++   
Sbjct: 751  TTTTPRSTTTTSTSGPTTTTPRSTTTTSTSGPTTTTPRSTTTTSTSGPTTTTPRSTTTTS 810

Query: 195  PSRPYPATPPRVPWRTAFRTSCGACHGTV*TSC*STRRRAFT*WRGPCRTNVRRAAQPWT 374
             S P   TP     R+   TS      T      + R    T   GP  T  R      T
Sbjct: 811  TSGPTTTTP-----RSTTTTSTSGPTTT------TPRSTTTTSTSGPTTTTPRSTTTTST 859

Query: 375  WTRCCTCGASSRNSCCTAPTGSPGPSQAAAPWRRYGPTLQTPRPTVGP*ACTTADST*AP 554
                 T   S+  +C + PT +   S          PT  TPR T     CT+  +T  P
Sbjct: 860  SCPTTTTPRSTTTTCTSGPTTTTPRSTTTTCTSC--PTTTTPRSTTT--TCTSCPTTTTP 915

Query: 555  RCPRTCCKSLGSSSKPRPRTGIRRCRTT 638
            R   T C S  +++ PR  T    C  T
Sbjct: 916  RSTTTTCTSGPTTTTPRSTTKTSTCAPT 943

 Score = 44.3 bits (103), Expect = 0.002
 Identities = 60/241 (24%), Positives = 85/241 (34%), Gaps = 9/241 (3%)
 Frame = +3

Query: 15   TRTTAAPAAAGSTPARCFQSPTSCAWTAWAATAAVAAVASLRASSLDSSRAQPTSSSLLP 194
            T TT+      +TP     + TSC  T    +      +    ++  S+    TS     
Sbjct: 838  TTTTSTSGPTTTTPRSTTTTSTSCPTTTTPRSTTTTCTSGPTTTTPRSTTTTCTSCPTTT 897

Query: 195  PSRPYPATPPRVPWRTAFRTSCGAC-HGTV*TSC*STRRRAFT*--WRGPCRTNVRRAAQ 365
              R    T    P  T  R++   C  G   T+  ST + +        P  T     ++
Sbjct: 898  TPRSTTTTCTSCPTTTTPRSTTTTCTSGPTTTTPRSTTKTSTCAPTTTTPRSTTTTSTSR 957

Query: 366  PWTWTRCCTCGASSRNSCCTAP--TGSPGPSQAAAPWRRYGPTLQTPRPTVGP*ACTTAD 539
            P T T   T   ++     T P  T +P  S+      R   T  T RPT      TT  
Sbjct: 958  PTTTTPRSTTTTTTSRPTTTTPRSTTTPSTSRPTTTTPRSTTTTSTSRPTTTTPRSTTKT 1017

Query: 540  ST*APRCPRTCCKSLGSSSKPRPRTGIRRCRTTWSGGR----RRRSPRLPTCARSGGTAA 707
            ST AP    T  +S  +++  RP T   R  TT +  R      RS   P  +R   T  
Sbjct: 1018 STCAP--TTTTPRSTTTTTTSRPTTTTPRSTTTTTTSRPTTTTPRSTTTPCTSRPTTTTP 1075

Query: 708  R 710
            R
Sbjct: 1076 R 1076

 Score = 43.9 bits (102), Expect = 0.003
 Identities = 57/237 (24%), Positives = 81/237 (34%), Gaps = 12/237 (5%)
 Frame = +3

Query: 24  TAAPAAAGSTPARCFQSPTSCAWTAWAATAAVAAVASLRASSLDSSRAQPTSSSLLPPSR 203
           T +     +TP  C Q+ T+   T   +T+                   P S++    SR
Sbjct: 204 TCSTQGTQTTPCTCAQTTTTPRSTTTTSTSRPTTTT-------------PRSTTTTTTSR 250

Query: 204 PYPATPPRVPWRTAFR--TSCGACHGTV*TSC*STRRRAFT*WRGPCRTNVRRAAQPWTW 377
           P   TP      T  R  T+   C  T  T   +T          P  T     ++P T 
Sbjct: 251 PTTTTPRSTTTTTTRRPTTTTPRCTTTTSTCAPTTTT--------PRSTTTTTTSRPTTT 302

Query: 378 TRCCTCGASSRNSCCTAP-----TGSPGPSQAAAPWRRYGPTLQTPRPTV-----GP*AC 527
           T  CT   S+ +   T P     T +  P+           T  T RPT          C
Sbjct: 303 TPRCTTTTSTCSPTRTTPRSTTTTSTSRPTTTTPRCTTTPSTTCTRRPTTTTPRSTTTTC 362

Query: 528 TTADST*APRCPRTCCKSLGSSSKPRPRTGIRRCRTTWSGGRRRRSPRLPTCARSGG 698
           T+  +T  PR   T C S  +++ PR  T      TT + G    +PR  T   + G
Sbjct: 363 TSGPTTTTPRSTTTTCTSGPTTTTPRSTT------TTSTSGPTTTTPRSTTTTSTSG 413

 Score = 39.3 bits (90), Expect = 0.067
 Identities = 65/223 (29%), Positives = 86/223 (38%), Gaps = 2/223 (0%)
 Frame = +3

Query: 18  RTTAAPAAAGSTPARCFQSPTSCAWTAWAATAAVAAVASLRASSLDSSRAQPTSSSLLPP 197
           RTTA+  +  ST  R   + T+  WT    T       S  +S+   S     +S+++P 
Sbjct: 136 RTTAS--STDSTTDRT--TVTNTDWTTPLCTDTPPCTCSEESSTAIPSSPCIDTSTVIPT 191

Query: 198 SRPYPATPPRVPWRTAFRTSCGACHGTV*TSC*STRRRAFT*WRGPCRTNVRRAAQPWTW 377
           S   P T       T   T   +  GT  T C   +         P  T     ++P T 
Sbjct: 192 S---PCTQ-----ETTTPTPTCSTQGTQTTPCTCAQTTTT-----PRSTTTTSTSRPTTT 238

Query: 378 T-RCCTCGASSRNSCCTAPTGSPGPSQAAAPWRRYGPTLQTPRPTVGP*ACTTADST*AP 554
           T R  T   +SR      PT +   S      RR  PT  TPR       CTT  ST AP
Sbjct: 239 TPRSTTTTTTSR------PTTTTPRSTTTTTTRR--PTTTTPR-------CTTTTSTCAP 283

Query: 555 RCPRTCCKSLGSSSKPRPRTGIRRCRTTWSG-GRRRRSPRLPT 680
               T  +S  +++  RP T   RC TT S     R +PR  T
Sbjct: 284 --TTTTPRSTTTTTTSRPTTTTPRCTTTTSTCSPTRTTPRSTT 324

>pir||T44768 antifreeze glycopeptide AFGP polyprotein precursor [imported] -
           Boreogadus saida gi|2078483|gb|AAC60129.1| antifreeze
           glycopeptide AFGP polyprotein precursor
          Length = 507

 Score = 50.4 bits (119), Expect = 3e-05
 Identities = 49/163 (30%), Positives = 67/163 (41%), Gaps = 1/163 (0%)
 Frame = +3

Query: 15  TRTTAAPAAAGSTPARCFQSPTSCAWTAWAATAAVAAVASLRASSLDSSRAQPTSSSLLP 194
           T  TAA AA  +TPAR  ++ T     A AATAA AA A+  A++   +RA   ++   P
Sbjct: 355 TAATAATAATAATPARAARAATP----ATAATAATAATAATAATAATPARAARAATPATP 410

Query: 195 PSRPYPATPPRVPWRTAFRTSCGACHGTV*TSC*STRRRAFT*WRGPCRTNVRRAAQPWT 374
            +   PATP      TA   +  A   T      +T   A T    P      RAA P T
Sbjct: 411 ATPATPATP-----ATAATAATAATAATA-----ATAATAATAATAPTPARAARAATPAT 460

Query: 375 WTRCCTCGASSRNSCCTAPTGSPGPSQAAAPWRRYGP-TLQTP 500
                T   +   +       +  P++A+ P     P T  TP
Sbjct: 461 GATPATAPTAGTAATAATAATAATPARASTPATAATPVTAATP 503

 Score = 44.3 bits (103), Expect = 0.002
 Identities = 62/235 (26%), Positives = 88/235 (37%), Gaps = 1/235 (0%)
 Frame = +3

Query: 15  TRTTAAPAAAGSTPARCFQSPTSCAWTAWAATAAVAAVASLRASSLDSSRAQPTSSSLLP 194
           T  TAA AA  +TPAR  ++ T        ATAA  A A+  A++  ++ A+  + +  P
Sbjct: 82  TAATAATAATAATPARAARAATP-------ATAATPATAATAATAATAATAETPARAATP 134

Query: 195 PSRPYPATPPRVPWRTAFRTSCGACHGTV*TSC-*STRRRAFT*WRGPCRTNVRRAAQPW 371
            +   PAT       TA   +  A   T  T+   +T   A T           RAA P 
Sbjct: 135 ATAATPATAATP--ATAATAATAATSATAATAARAATPATAATPATPATAARAARAATPA 192

Query: 372 TWTRCCTCGASSRNSCCTAPTGSPGPSQAAAPWRRYGPTLQTPRPTVGP*ACTTADST*A 551
           T     T  A++  +  TA T +   + A A       T  TP     P   T A +  A
Sbjct: 193 TAATAAT--AATAATAATAATAATAATPARAARAATPATAPTPATAATP--ATAATAATA 248

Query: 552 PRCPRTCCKSLGSSSKPRPRTGIRRCRTTWSGGRRRRSPRLPTCARSGGTAARLA 716
           P    T      ++    P T       T +      +P  P  A +  TAA  A
Sbjct: 249 P----TAATPARAARAATPATA-----ATLATAATPATPATPATAATDATAATAA 294

 Score = 42.7 bits (99), Expect = 0.006
 Identities = 66/270 (24%), Positives = 90/270 (32%), Gaps = 36/270 (13%)
 Frame = +3

Query: 15  TRTTAAPAAAGSTPARCFQSPTSCAWTAWA---------------------ATAAVAAVA 131
           T  TAA  A  +TPA    + T+ A  A A                     ATAA AA A
Sbjct: 60  TAATAATPATAATPATAATAATTAATAATAATAATPARAARAATPATAATPATAATAATA 119

Query: 132 SLRASSLDSSRAQPTSSSLLPPSRPYPATPPRVPW-------RTAFRTSCGACHGTV*TS 290
           +  A++   +RA   +++  P +   PAT              TA R +  A   T  T 
Sbjct: 120 ATAATAETPARAATPATAATPATAATPATAATAATAATSATAATAARAATPATAATPATP 179

Query: 291 C*STR-RRAFT*WRGPCRTNVRRAAQPWTWTRCCTCGASSRNSCCTAPTGSPGPSQAAAP 467
             + R  RA T            AA   T     T    +R +    P  +P P+ AA P
Sbjct: 180 ATAARAARAATPATAATAATAATAATAATAATAATAATPARAARAATPATAPTPATAATP 239

Query: 468 ----WRRYGPTLQTP---RPTVGP*ACTTADST*APRCPRTCCKSLGSSSKPRPRTGIRR 626
                    PT  TP        P    T  +   P  P T   +   ++     T  R 
Sbjct: 240 ATAATAATAPTAATPARAARAATPATAATLATAATPATPATPATAATDATAATAATPAR- 298

Query: 627 CRTTWSGGRRRRSPRLPTCARSGGTAARLA 716
              T +      +P  P  A +  TAA  A
Sbjct: 299 -AATPATPATAATPATPATAATAATAATAA 327

 Score = 40.4 bits (93), Expect = 0.030
 Identities = 62/234 (26%), Positives = 86/234 (36%)
 Frame = +3

Query: 15  TRTTAAPAAAGSTPARCFQSPTSCAWTAWAATAAVAAVASLRASSLDSSRAQPTSSSLLP 194
           T  TAA  A  +TPA    +P + A  A  ATAA AA A+  A++   +RA   + +  P
Sbjct: 289 TAATAATPARAATPA----TPATAATPATPATAATAATAATAATAATPARA---ARAATP 341

Query: 195 PSRPYPATPPRVPWRTAFRTSCGACHGTV*TSC*STRRRAFT*WRGPCRTNVRRAAQPWT 374
            +   PAT       TA   +  A   T  T               P R    RAA P T
Sbjct: 342 ATAATPATA-----ATAATAATAATAATAAT---------------PAR--AARAATPAT 379

Query: 375 WTRCCTCGASSRNSCCTAPTGSPGPSQAAAPWRRYGPTLQTPRPTVGP*ACTTADST*AP 554
                   A++  +  TA T +   + A A       T  TP     P    TA +    
Sbjct: 380 --------AATAATAATAATAATAATPARAARAATPATPATPATPATPATAATAATAATA 431

Query: 555 RCPRTCCKSLGSSSKPRPRTGIRRCRTTWSGGRRRRSPRLPTCARSGGTAARLA 716
               T   +  +++ P P     R  T  +G     +P   T A +  TAA  A
Sbjct: 432 ATAATAATAATAATAPTPARA-ARAATPATGATPATAPTAGTAA-TAATAATAA 483

 Score = 37.4 bits (85), Expect = 0.25
 Identities = 65/251 (25%), Positives = 91/251 (35%), Gaps = 14/251 (5%)
 Frame = +3

Query: 6   RWLTRTTAAPAAAGSTPARCFQSPTSCAWTAWAATAAVAAVASLRASSLDSSRAQPTSSS 185
           R  T  TAA  A  +TPA    + T  A  A AAT A AA  +  A++  ++    T+++
Sbjct: 33  RAATPATAATPATAATPATAATAATE-ATAATAATPATAATPATAATAATTAATAATAAT 91

Query: 186 LLPPSRPYPATPPRVPWRTAFRTSCGACHGTV*TSC*S-TRRRAFT*WRGPCRTNVRRAA 362
              P+R   A  P     TA   +  A   T  T+  + T  RA T            AA
Sbjct: 92  AATPARAARAATP----ATAATPATAATAATAATAATAETPARAAT---PATAATPATAA 144

Query: 363 QPWTWTRCCTCGASSRNSCCTAPTGSPG-------PSQAAAPWRRYGPTLQTPRPTVGP* 521
            P T     T  A+S  +   A   +P        P+ AA   R   P       T    
Sbjct: 145 TPATAATAAT-AATSATAATAARAATPATAATPATPATAARAARAATPATAATAATAATA 203

Query: 522 A-CTTADST*APRCPRTCCKSLGSSSKPRPRTGIRRCRTTWSGGRRRRSPRLPTCARSG- 695
           A   TA +      P    ++   ++ P P T      T  +      +P   T AR+  
Sbjct: 204 ATAATAATAATAATPARAARAATPATAPTPAT----AATPATAATAATAPTAATPARAAR 259

Query: 696 ----GTAARLA 716
                TAA LA
Sbjct: 260 AATPATAATLA 270

 Score = 33.9 bits (76), Expect = 2.8
 Identities = 54/214 (25%), Positives = 78/214 (36%)
 Frame = +3

Query: 75  PTSCAWTAWAATAAVAAVASLRASSLDSSRAQPTSSSLLPPSRPYPATPPRVPWRTAFRT 254
           P + A  A  ATAA  A A+  A++  ++     +++  P +   PAT       TA  T
Sbjct: 28  PAAAARAATPATAATPATAATPATAATAATEATAATAATPATAATPATA-----ATAATT 82

Query: 255 SCGACHGTV*TSC*STRRRAFT*WRGPCRTNVRRAAQPWTWTRCCTCGASSRNSCCTAPT 434
           +  A          +T   A T    P R    RAA P T     T  A++  +  TA T
Sbjct: 83  AATA----------ATAATAAT----PAR--AARAATPATAATPAT--AATAATAATAAT 124

Query: 435 GSPGPSQAAAPWRRYGPTLQTPRPTVGP*ACTTADST*APRCPRTCCKSLGSSSKPRPRT 614
               P++AA P      T  TP     P    TA +        T  ++   ++   P T
Sbjct: 125 AET-PARAATP-----ATAATPATAATPATAATAATAATSATAATAARAATPATAATPAT 178

Query: 615 GIRRCRTTWSGGRRRRSPRLPTCARSGGTAARLA 716
                R       R  +P     A +  TAA  A
Sbjct: 179 PATAARAA-----RAATPATAATAATAATAATAA 207

>emb|CAC83675.1| mucin 5 [Homo sapiens]
          Length = 1349

 Score = 48.9 bits (115), Expect = 8e-05
 Identities = 56/236 (23%), Positives = 87/236 (36%), Gaps = 11/236 (4%)
 Frame = +3

Query: 24   TAAPAAAGSTPARCFQSPTSCAWTAWAATAAVAAVASLRASSLDSSRAQPTSSSLLPPSR 203
            T+ P  A STP+    SPT  + ++W  +     V +   S+  +S     ++S +P S 
Sbjct: 1036 TSTPVTAPSTPSGRATSPTQ-STSSWQKSRTTTLVTTSTTSTPQTSTTSAPTTSTIPAST 1094

Query: 204  PYPATPPRVPWRTA----------FRTSCGACHGTV*TSC*STRRRAFT*WRGPCRTNVR 353
            P   + P     +A           RT+ G    T      ST     T       T+  
Sbjct: 1095 PSTTSAPTTSTTSAPTTSTTSAPTHRTTSGPTTSTTLAPTTSTTSAPTTSTNSAPTTSTI 1154

Query: 354  RAAQPWTWTRCCTCGASSRNSCCTAPTGSPGPSQAAAPWRRYGPTLQTPRPTVGP*ACTT 533
             A+   T +   T   SS  S  T+   +   S A +       T  +P PT    + +T
Sbjct: 1155 SASTTSTISAPTTSTISSPTSSTTSTPQTSKTSAATSSTTSGSGTTPSPVPTTSTTSAST 1214

Query: 534  ADST*APRCPRTCCKSLGSSSKPRPRTGIRRCRTT-WSGGRRRRSPRLPTCARSGG 698
              +T AP    T     G++  P P T I    TT  +     R+   PT + + G
Sbjct: 1215 TSTTSAPTTSTT--SGPGTTPSPVPSTSITSAATTSTTSAPTTRTTSAPTSSMTSG 1268

>emb|CAB65669.1| glycoprotein G-2 [Human herpesvirus 2] gi|6688359|emb|CAB65670.1|
           glycoprotein G-2 [Human herpesvirus 2]
          Length = 356

 Score = 35.0 bits (79), Expect(2) = 2e-04
 Identities = 44/146 (30%), Positives = 54/146 (36%), Gaps = 22/146 (15%)
 Frame = +1

Query: 250 GLHAAPATGPSELPADRPGGELLPDGA--------ARVGQMSAARLNPGRGRGAAH--AA 399
           G  AAP T  S L A  P     P  A        A  G    AR  P   +   H  A 
Sbjct: 143 GASAAP-TADSPLTASPPATAPGPSAANVSVAATTATPGTRGTARTPPTDPKTHPHGPAD 201

Query: 400 HPQGTPAAQPPLGRLGRHRQQLHGD---------AMGQRCRHPDQRLAPEHAPPPTQPE- 549
            P G+PA  PP  R G    +  GD         A G   R P+    P   P P +P  
Sbjct: 202 APPGSPAPPPPEHRGGPEEFEGAGDGEPPEDDDSATGLAFRTPNPNKPPPARPGPIRPTL 261

Query: 550 PHGVHGRAASRL--EAAQSPGRELGS 621
           P G+ G  A       AQ+P +++ S
Sbjct: 262 PPGILGPLAPNTPRPPAQAPAKDMPS 287

 Score = 32.3 bits (72), Expect(2) = 2e-04
 Identities = 22/74 (29%), Positives = 31/74 (41%), Gaps = 9/74 (12%)
 Frame = +3

Query: 30  APAAAGSTPARCFQSPTSCAWTAWAATAAVAAVASLRASSLDSSRAQP---------TSS 182
           APA          Q+ T        A A+  A AS+ +S L ++ A P          S+
Sbjct: 41  APATTTPPDEMATQAATVAVTPEETAVASPPATASVESSPLPAAAATPGAGHTNTSSASA 100

Query: 183 SLLPPSRPYPATPP 224
           +  PP+ P P TPP
Sbjct: 101 AKTPPTTPAPTTPP 114

>emb|CAB65672.1| glycoprotein G-2 [Human herpesvirus 2]
          Length = 356

 Score = 35.0 bits (79), Expect(2) = 2e-04
 Identities = 44/146 (30%), Positives = 54/146 (36%), Gaps = 22/146 (15%)
 Frame = +1

Query: 250 GLHAAPATGPSELPADRPGGELLPDGA--------ARVGQMSAARLNPGRGRGAAH--AA 399
           G  AAP T  S L A  P     P  A        A  G    AR  P   +   H  A 
Sbjct: 143 GASAAP-TADSPLTASPPATAPGPSAANVSVAATTATPGTRGTARTPPTDPKTHPHGPAD 201

Query: 400 HPQGTPAAQPPLGRLGRHRQQLHGD---------AMGQRCRHPDQRLAPEHAPPPTQPE- 549
            P G+PA  PP  R G    +  GD         A G   R P+    P   P P +P  
Sbjct: 202 APPGSPAPPPPEHRGGPEEFEGAGDGEPPEDDDSATGLAFRTPNPNKPPPARPGPIRPTL 261

Query: 550 PHGVHGRAASRL--EAAQSPGRELGS 621
           P G+ G  A       AQ+P +++ S
Sbjct: 262 PPGILGPLAPNTPRPPAQAPAKDMPS 287

 Score = 32.0 bits (71), Expect(2) = 2e-04
 Identities = 24/80 (30%), Positives = 35/80 (43%), Gaps = 16/80 (20%)
 Frame = +3

Query: 33  PAAAGSTPAR-------CFQSPTSCAWTAWAATAAVAAVASLRASSLDSSRAQP------ 173
           P+A  +TPA          Q+ T        A A+  A AS+ +S L ++ A P      
Sbjct: 35  PSAEPTTPATTTPPDEMATQAATVAVTPEETAVASPPATASVESSPLPAAAATPGAGHTN 94

Query: 174 ---TSSSLLPPSRPYPATPP 224
               S++  PP+ P P TPP
Sbjct: 95  TSSASAAKTPPTTPAPTTPP 114



EST assemble image


clone accession position
1 HCL050a06_r AV642339 1 433
2 MXL002b06_r BP093013 179 575
3 MXL039g09_r BP095314 215 684
4 LCL077c09_r AV630327 229 750




Chlamydomonas reinhardtii
Kazusa DNA Research Institute