Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC002514A_C01 KCC002514A_c01
(391 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|ZP_00015890.1| COG3200: 3-deoxy-D-arabino-heptulosonate 7-ph... 38 0.039
ref|NP_777344.1| hypothetical protein [Bacteriophage IN93] gi|27... 36 0.15
emb|CAC05796.1| unnamed protein product [Shigella flexneri] 34 0.57
ref|NP_858252.1| hypothetical protein [Shigella flexneri 2a] gi|... 34 0.57
dbj|BAC92585.1| hypothetical protein [Oryza sativa (japonica cul... 34 0.57
>ref|ZP_00015890.1| COG3200: 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP)
synthase [Rhodospirillum rubrum]
Length = 703
Score = 37.7 bits (86), Expect = 0.039
Identities = 19/55 (34%), Positives = 24/55 (43%)
Frame = -2
Query: 378 THSCPIHTCRWE*HQAHRTE*SGAALGDL*RRHGSRE*PPGAPPAPRAIGRAECA 214
+H C H C W H+ HR + G GD R H + PG R GR + A
Sbjct: 3 SHHCRHHLCHWRRHRPHRPDPGGDQRGDRLRPHRVQRYAPGDGLRERGFGRVQPA 57
>ref|NP_777344.1| hypothetical protein [Bacteriophage IN93]
gi|27807684|dbj|BAC55306.1| hypothetical protein
[Bacteriophage IN93]
Length = 239
Score = 35.8 bits (81), Expect = 0.15
Identities = 23/58 (39%), Positives = 24/58 (40%), Gaps = 5/58 (8%)
Frame = +2
Query: 176 RGCWSLWT-----VLRLGAHSARPIALGAGGAPGGYSREPCRRYRSPSAAPLYSVRWA 334
RG W LW VL L A P G GG PG S P Y P PL RW+
Sbjct: 10 RGSWVLWALGALGVLALARAGASPARGGGGGTPGSGSACP---YPPPGPPPLDKDRWS 64
>emb|CAC05796.1| unnamed protein product [Shigella flexneri]
Length = 258
Score = 33.9 bits (76), Expect = 0.57
Identities = 32/105 (30%), Positives = 42/105 (39%)
Frame = -3
Query: 371 AARSTLVGGNNIRPTELSRAALR*ATCSGGMARASNRQEHHQHREQLDEPNAPQAARLST 192
A R+ GN +P A R + SG R +H + R+Q P AP L
Sbjct: 51 ALRTAGSPGNRRKPHAECDAKRRAGSPSGPDVHQLQRSQHKKSRQQ--RPGAPAHVCLLP 108
Query: 191 ATNSRGRCSCVAPHDGALVRRKRFVRGLRTECTPDRAKAPGKGLP 57
RGRC + A VR+ R T C P RA +G+P
Sbjct: 109 GAG-RGRCLLAS----ADVRKSGECRRCTTYCQPLRATLADRGIP 148
>ref|NP_858252.1| hypothetical protein [Shigella flexneri 2a]
gi|18462647|gb|AAL72419.1| hypothetical protein
[Shigella flexneri 2a]
Length = 371
Score = 33.9 bits (76), Expect = 0.57
Identities = 32/105 (30%), Positives = 42/105 (39%)
Frame = -3
Query: 371 AARSTLVGGNNIRPTELSRAALR*ATCSGGMARASNRQEHHQHREQLDEPNAPQAARLST 192
A R+ GN +P A R + SG R +H + R+Q P AP L
Sbjct: 164 ALRTAGSPGNRRKPHAECDAKRRAGSPSGPDVHQLQRSQHKKSRQQ--RPGAPAHVCLLP 221
Query: 191 ATNSRGRCSCVAPHDGALVRRKRFVRGLRTECTPDRAKAPGKGLP 57
RGRC + A VR+ R T C P RA +G+P
Sbjct: 222 GAG-RGRCLLAS----ADVRKSGECRRCTTYCQPLRATLADRGIP 261
>dbj|BAC92585.1| hypothetical protein [Oryza sativa (japonica cultivar-group)]
Length = 234
Score = 33.9 bits (76), Expect = 0.57
Identities = 17/35 (48%), Positives = 21/35 (59%), Gaps = 2/35 (5%)
Frame = +2
Query: 197 TVLRLGAHSARPIALGAG--GAPGGYSREPCRRYR 295
++L LG HSA P+ G GA +SR PCRR R
Sbjct: 137 SLLSLGCHSAAPLVAGGDHRGAGAPFSRRPCRRGR 171
