KCC002486A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC002486A_C01 KCC002486A_c01
ctgatcagcggcacgcacaacgtcgccaacctgcagatcatcatgaccaagatcggaggc
gtgtgcctggTGACCATCGGTGTCTGGGTGGTGATTGAGCTGGCCGTGCAGTTCGGCCAC
TACGGCCACGGCTGCACTTCCGGCGAGGAGGGCTGCCCCACCCTGATCAACATGCTGGTG
ATCCTGGTCGGTGGTATCCCCATTGCCATGCCCACCGTGCTGTCCGTCACCCTGGCTCTG
GGCGCTGCCAAGCTGGCCAAGGAGGGCGCCATTGTGGCCCGCATGAGCGCTGTGGAGGAG
ATGGCCGGTATGGACATTCTGTGCTCGGACAAGACCGGCACCCTTACGCTGAACAAACTG
TCGATCGACATGAACACCATCTACAAGTGCGAGCCCGGTATCACCAACGACGACGTGGCC
AAGTACGGCGCGCTGTCGGCCGACGTTGCCGGCGAGGAGCCCATCGACATGGTGCTCTTC
AACAACTACGCCAACGCCAAGGACCTGGCCGCCCGTTACAAGAAGATCAAGTGGGTGCCC
TTCAACCCCACCGACAAGTTCACCGCCATCACGCTCATGGACCAGGAGACCGGCCGCGTC
TTCCGCCTGCTCAAGGGCTCGCCCCAGGTGGTTCTGGGCAAGGCGTACAACAAGGACACT
CTGGCCGACAACGTGAACGCCAAGATGGTGGAGTTCGCCAACCGCGGCTTCCGCTCCCTG
GGTGTGGCCATGGCCGAGGGCGATGGCGCTGACGGCAAGCACGAGTGGCACATGCTGGCG
CTGCTGCCCCTGTTCGACCCGCCCCGCCACGACACCAAGGACACCATCGAGTACTGCCAC
GGCCAGGGCATTGAGGTGAAGATGGTGACTGGCGACCACCTGCTGATCGGCAAGGAGACC
GCCAAGATGCTGGGCATGGGCACCGTCATGTACCCCTCGGAGGTCCTGATCAAGGCCAAG
AACGGCGACAAGGGCGCCCTGGGCGACTTCCGCGACGTGACCCACATGGTGGAGTCGTGC
AACGGCTTTGCTGAGGTGTTCCCCGAGCACAAGTAC


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC002486A_C01 KCC002486A_c01
         (1056 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

gb|AAL25803.1| putative plasma membrane-type proton ATPase [Chla...   709  0.0
sp|P54210|PMA1_DUNAC Plasma membrane ATPase (Proton pump) gi|130...   485  e-136
sp|P54211|PMA1_DUNBI Plasma membrane ATPase (Proton pump) gi|479...   484  e-135
dbj|BAA23638.1| H+-ATPase [Dunaliella salina]                         310  2e-83
emb|CAB85494.1| H+-ATPase [Medicago truncatula]                       305  1e-81

>gb|AAL25803.1| putative plasma membrane-type proton ATPase [Chlamydomonas
            reinhardtii]
          Length = 1081

 Score =  709 bits (1831), Expect = 0.0
 Identities = 351/352 (99%), Positives = 351/352 (99%)
 Frame = +1

Query: 1    LISGTHNVANLQIIMTKIGGVCLVTIGVWVVIELAVQFGHYGHGCTSGEEGCPTLINMLV 180
            LISGTHNVANLQIIMTKIGGVCLVTIGVWVVIELAVQFGHYGHGCTSGEEGCPTL NMLV
Sbjct: 238  LISGTHNVANLQIIMTKIGGVCLVTIGVWVVIELAVQFGHYGHGCTSGEEGCPTLTNMLV 297

Query: 181  ILVGGIPIAMPTVLSVTLALGAAKLAKEGAIVARMSAVEEMAGMDILCSDKTGTLTLNKL 360
            ILVGGIPIAMPTVLSVTLALGAAKLAKEGAIVARMSAVEEMAGMDILCSDKTGTLTLNKL
Sbjct: 298  ILVGGIPIAMPTVLSVTLALGAAKLAKEGAIVARMSAVEEMAGMDILCSDKTGTLTLNKL 357

Query: 361  SIDMNTIYKCEPGITNDDVAKYGALSADVAGEEPIDMVLFNNYANAKDLAARYKKIKWVP 540
            SIDMNTIYKCEPGITNDDVAKYGALSADVAGEEPIDMVLFNNYANAKDLAARYKKIKWVP
Sbjct: 358  SIDMNTIYKCEPGITNDDVAKYGALSADVAGEEPIDMVLFNNYANAKDLAARYKKIKWVP 417

Query: 541  FNPTDKFTAITLMDQETGRVFRLLKGSPQVVLGKAYNKDTLADNVNAKMVEFANRGFRSL 720
            FNPTDKFTAITLMDQETGRVFRLLKGSPQVVLGKAYNKDTLADNVNAKMVEFANRGFRSL
Sbjct: 418  FNPTDKFTAITLMDQETGRVFRLLKGSPQVVLGKAYNKDTLADNVNAKMVEFANRGFRSL 477

Query: 721  GVAMAEGDGADGKHEWHMLALLPLFDPPRHDTKDTIEYCHGQGIEVKMVTGDHLLIGKET 900
            GVAMAEGDGADGKHEWHMLALLPLFDPPRHDTKDTIEYCHGQGIEVKMVTGDHLLIGKET
Sbjct: 478  GVAMAEGDGADGKHEWHMLALLPLFDPPRHDTKDTIEYCHGQGIEVKMVTGDHLLIGKET 537

Query: 901  AKMLGMGTVMYPSEVLIKAKNGDKGALGDFRDVTHMVESCNGFAEVFPEHKY 1056
            AKMLGMGTVMYPSEVLIKAKNGDKGALGDFRDVTHMVESCNGFAEVFPEHKY
Sbjct: 538  AKMLGMGTVMYPSEVLIKAKNGDKGALGDFRDVTHMVESCNGFAEVFPEHKY 589

>sp|P54210|PMA1_DUNAC Plasma membrane ATPase (Proton pump) gi|1305501|gb|AAB49042.1| plasma
            membrane proton ATPase
          Length = 1103

 Score =  485 bits (1249), Expect = e-136
 Identities = 245/354 (69%), Positives = 288/354 (81%), Gaps = 2/354 (0%)
 Frame = +1

Query: 1    LISGTHNVANLQIIMTKIGGVCLVTIGVWVVIELAVQFGHYGHGCTSGEEGCPTLINMLV 180
            LISGTHNVAN+Q +M +IGG+CL+TIGVWVVIE+ VQF HY H C +G+EGCPTL+NMLV
Sbjct: 249  LISGTHNVANIQRVMNRIGGLCLITIGVWVVIEVPVQFAHYKHSCVAGKEGCPTLLNMLV 308

Query: 181  ILVGGIPIAMPTVLSVTLALGAAKLAKEGAIVARMSAVEEMAGMDILCSDKTGTLTLNKL 360
            ILVG IPIAMPTVLSVTLALGA KLA+EGAIV RMSAVEEMAG+D+LCSDKTGTLTLNKL
Sbjct: 309  ILVGAIPIAMPTVLSVTLALGAYKLAREGAIVTRMSAVEEMAGLDVLCSDKTGTLTLNKL 368

Query: 361  SIDMNTIYKCEPGITND--DVAKYGALSADVAGEEPIDMVLFNNYANAKDLAARYKKIKW 534
            SID + ++   P  T D  +V K+GALSA++  EEPIDMVL+ +Y   + L + YK  K+
Sbjct: 369  SIDPSNVF---PVGTMDIPEVMKFGALSANIITEEPIDMVLWESYPEREKLKSEYKHTKY 425

Query: 535  VPFNPTDKFTAITLMDQETGRVFRLLKGSPQVVLGKAYNKDTLADNVNAKMVEFANRGFR 714
             PFNP DK T  T+++  TGRVFR+LKGSPQVVL KA+N   L   VN K+ E+A RGFR
Sbjct: 426  FPFNPNDKITIATVLEIATGRVFRVLKGSPQVVLAKAWNAQALDGPVNEKIKEYAGRGFR 485

Query: 715  SLGVAMAEGDGADGKHEWHMLALLPLFDPPRHDTKDTIEYCHGQGIEVKMVTGDHLLIGK 894
            SLG+AMAEGDG DG  +W MLA+LP+FDPPRHDTK+TIE C  QGI VKMVTGDHLLIGK
Sbjct: 486  SLGIAMAEGDGKDGT-KWEMLAVLPMFDPPRHDTKETIERCMKQGIAVKMVTGDHLLIGK 544

Query: 895  ETAKMLGMGTVMYPSEVLIKAKNGDKGALGDFRDVTHMVESCNGFAEVFPEHKY 1056
            ETAKMLGMGT MYPSEVLIKA+NGD  A   +++   MVE+CNGFA+VFPEHK+
Sbjct: 545  ETAKMLGMGTEMYPSEVLIKARNGDVEAPHGYKNYVAMVEACNGFAQVFPEHKF 598

>sp|P54211|PMA1_DUNBI Plasma membrane ATPase (Proton pump) gi|479503|pir||S34213
            H+-exporting ATPase (EC 3.6.3.6), plasma membrane - green
            alga (Dunaliella bioculata) gi|313704|emb|CAA52107.1|
            plasma membrane ATPase [Dunaliella bioculata]
          Length = 1131

 Score =  484 bits (1246), Expect = e-135
 Identities = 239/352 (67%), Positives = 285/352 (80%)
 Frame = +1

Query: 1    LISGTHNVANLQIIMTKIGGVCLVTIGVWVVIELAVQFGHYGHGCTSGEEGCPTLINMLV 180
            LISGT+NV+NLQ +M K+  +C+VTI +WVV+ELAVQFGHY H C  G EGCPTL+NMLV
Sbjct: 248  LISGTNNVSNLQTVMNKMSAICIVTILLWVVVELAVQFGHYSHECVGGREGCPTLLNMLV 307

Query: 181  ILVGGIPIAMPTVLSVTLALGAAKLAKEGAIVARMSAVEEMAGMDILCSDKTGTLTLNKL 360
            +LVGGIPIAMPTVLSVTLALGA KLA+EGAIV RMSAVEEMAGMD+LCSDKTGTLTLNKL
Sbjct: 308  VLVGGIPIAMPTVLSVTLALGAYKLAREGAIVTRMSAVEEMAGMDVLCSDKTGTLTLNKL 367

Query: 361  SIDMNTIYKCEPGITNDDVAKYGALSADVAGEEPIDMVLFNNYANAKDLAARYKKIKWVP 540
            SID + +      +  D++ + GALSA+   EEPIDMVL+ +Y + + +   YK  K+ P
Sbjct: 368  SIDKSMVVPV-GNMGVDEIMRMGALSANTVTEEPIDMVLWESYPDRETIKRDYKHTKYFP 426

Query: 541  FNPTDKFTAITLMDQETGRVFRLLKGSPQVVLGKAYNKDTLADNVNAKMVEFANRGFRSL 720
            FNP DK T  T ++  TGRVFR+LKGSPQVVL KA+N   L   VN KMVEFANRGFR+L
Sbjct: 427  FNPNDKITIATCLEIATGRVFRVLKGSPQVVLAKAWNAAELDATVNQKMVEFANRGFRAL 486

Query: 721  GVAMAEGDGADGKHEWHMLALLPLFDPPRHDTKDTIEYCHGQGIEVKMVTGDHLLIGKET 900
            G+AMA+GDG DG  +W MLALLPLFDPPRHDTK+TIE+C  QGI+VKM+TGDHLLIGKET
Sbjct: 487  GLAMADGDGKDGT-KWEMLALLPLFDPPRHDTKETIEHCQNQGIQVKMITGDHLLIGKET 545

Query: 901  AKMLGMGTVMYPSEVLIKAKNGDKGALGDFRDVTHMVESCNGFAEVFPEHKY 1056
            AKMLGMGT M+PSEV+IKA+NGD   L  +++   MVE+CNGFA+VFPEHK+
Sbjct: 546  AKMLGMGTEMFPSEVMIKARNGDASQLHGYKNFVEMVETCNGFAQVFPEHKF 597

>dbj|BAA23638.1| H+-ATPase [Dunaliella salina]
          Length = 265

 Score =  310 bits (795), Expect = 2e-83
 Identities = 153/245 (62%), Positives = 188/245 (76%)
 Frame = +1

Query: 322  CSDKTGTLTLNKLSIDMNTIYKCEPGITNDDVAKYGALSADVAGEEPIDMVLFNNYANAK 501
            CSDKTGTLTLNKLSID + +    P +  D++ K GALSA+   EEPIDMVL+ +Y    
Sbjct: 1    CSDKTGTLTLNKLSIDKSMVVPVGP-MGVDEIMKMGALSANTVTEEPIDMVLWESYPERD 59

Query: 502  DLAARYKKIKWVPFNPTDKFTAITLMDQETGRVFRLLKGSPQVVLGKAYNKDTLADNVNA 681
             +   YK  K+ PFNP DK T  T ++  TG+VFR+LKGSPQVVLGKA+N   L   VN 
Sbjct: 60   TIKRDYKHTKYFPFNPNDKITIATCLEYATGKVFRVLKGSPQVVLGKAWNAAELDATVNQ 119

Query: 682  KMVEFANRGFRSLGVAMAEGDGADGKHEWHMLALLPLFDPPRHDTKDTIEYCHGQGIEVK 861
            KMV+FANRGFR+LG+A+A+GDG +G  +W MLALLPLFDPPRHDTKDTIE+C  QGI+VK
Sbjct: 120  KMVDFANRGFRALGLAIADGDGKEGT-KWEMLALLPLFDPPRHDTKDTIEHCQTQGIQVK 178

Query: 862  MVTGDHLLIGKETAKMLGMGTVMYPSEVLIKAKNGDKGALGDFRDVTHMVESCNGFAEVF 1041
            M+TGDHLLIGKET +MLGMGT M+PSEV+IKA+NGD   L  +++   MVE+CN FA+VF
Sbjct: 179  MITGDHLLIGKETTRMLGMGTEMFPSEVMIKARNGDASQLHGYKNFVEMVETCNTFAQVF 238

Query: 1042 PEHKY 1056
            PEHK+
Sbjct: 239  PEHKF 243

>emb|CAB85494.1| H+-ATPase [Medicago truncatula]
          Length = 965

 Score =  305 bits (780), Expect = 1e-81
 Identities = 162/355 (45%), Positives = 231/355 (64%), Gaps = 3/355 (0%)
 Frame = +1

Query: 1    LISGTHNVANLQIIMTKIGGVCLVTIGVWVVIELAVQFGHYGHGCTSGEEGCPTLINMLV 180
            L+  T +V + Q ++T IG  C+ +I + +VIE+ V +G +G G  +G +      N+LV
Sbjct: 236  LVENTTHVGHFQKVLTSIGNFCICSIAIGMVIEIIVIYGVHGKGYRNGID------NLLV 289

Query: 181  ILVGGIPIAMPTVLSVTLALGAAKLAKEGAIVARMSAVEEMAGMDILCSDKTGTLTLNKL 360
            +L+GGIPIAMPTVLSVT+A+G+ KL+++GAI  RM+A+EEMAGMD+LCSDKTGTLTLNKL
Sbjct: 290  LLIGGIPIAMPTVLSVTMAIGSHKLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL 349

Query: 361  SIDMNTIYKCEPGITNDDVAKYGALSADVAGEEPIDMVLFNNYANAKDLAARYKKIKWVP 540
            ++D + I     G+  D V    A ++ +  ++ ID  + +  A+ K+     K++ ++P
Sbjct: 350  TVDKDMIEVFAKGVDKDLVVLMAARASRLENQDAIDCAIVSMLADPKEARTGIKEVHFLP 409

Query: 541  FNPTDKFTAITLMDQETGRVFRLLKGSPQVVLGKAYNKDTLADNVNAKMVEFANRGFRSL 720
            FNPTDK TA+T +D   G + R+ KG+P+ +L  A NK  +A  V++ + +FA RG RSL
Sbjct: 410  FNPTDKRTALTYID-AAGNMHRVSKGAPEQILNLARNKAEIAQKVHSMIDKFAERGLRSL 468

Query: 721  GVA---MAEGDGADGKHEWHMLALLPLFDPPRHDTKDTIEYCHGQGIEVKMVTGDHLLIG 891
            GVA   + EG        W  +ALLPLFDPPRHD+ +TI      G+ VKM+TGD L IG
Sbjct: 469  GVARQEVPEGSKDSPGGPWEFVALLPLFDPPRHDSAETIRRALDLGVSVKMITGDQLAIG 528

Query: 892  KETAKMLGMGTVMYPSEVLIKAKNGDKGALGDFRDVTHMVESCNGFAEVFPEHKY 1056
            KET + LGMGT MYPS  L+       GA+     +  ++E+ +GFA VFPEHKY
Sbjct: 529  KETGRRLGMGTNMYPSSSLLGDNKDQLGAV----SIDDLIENADGFAGVFPEHKY 579



EST assemble image


clone accession position
1 MXL061g01_r BP096609 1 202
2 MXL086a01_r BP098050 71 447
3 MXL023c05_r BP094453 235 782
4 MXL080a05_r BP097706 304 668
5 LCL013g12_r AV626694 327 586
6 LCL095a08_r AV631497 336 834
7 LCL091e10_r AV631292 378 589
8 LCL099d05_r AV631761 395 937
9 MXL021e12_r BP094346 397 605
10 LCL035c02_r AV628007 456 938
11 LCL039a08_r AV628243 547 1001
12 LCL065f05_r AV629766 564 999
13 HCL090e11_r AV644561 574 938
14 LCL081h07_r AV630637 655 901
15 HCL044c10_r AV642037 742 1056




Chlamydomonas reinhardtii
Kazusa DNA Research Institute