KCC002483A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC002483A_C01 KCC002483A_c01
catattctatCAAGCTTCACGTCATCAATTAACACATTACTTAATAACAATTATAAGTCT
TCTATCTGAGTTCGGTCCCGCTGAGTTTCGGTCCTTGCTTTCAAGCCTCCTTAGCTGCTG
AGACGTCACCATGGCAGAGCTAGAAAAGACTTTCGCGTTAATCAAGCCAGATGCCGTGCG
GGCCGGCAAGGCGCAGGAAATCATGCAGCTTATCGAGCTGAATGGCTTCACGATTATCGC
CAAGCAGAAGCTACAGTTGACACGGGCCCGCGCGGAGGAGTTCTATGGCGAGCACAAGGG
AAAGGAGTTCTTCCCTAAGCTGGTGAACTTTATGACCAGCGGGCCTATCTGGGCGCTTGT
GCTGGCCAAGCCTGGTGCCATTCTGGCTTGGCGTGCGCTGATGGGCCCAACCAACGTGTT
TAAAGCCCGCGCGGAGCAGCCTAAGTGCCTGCGCGCGCTGTACGGAACGGACGGCACCCA
GAATGC


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC002483A_C01 KCC002483A_c01
         (486 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|NP_542368.1| expressed in non-metastatic cells 5 [Mus muscul...   106  1e-22
sp|Q99MH5|NDK5_MOUSE Nucleoside diphosphate kinase homolog 5 (ND...   106  1e-22
ref|NP_572965.1| CG5310-PA [Drosophila melanogaster] gi|7595825|...   104  5e-22
ref|NP_835172.1| non-metastatic cells 7, protein expressed in; n...   104  6e-22
ref|NP_612187.1| non-metastatic cells 7, protein expressed in; n...   104  6e-22

>ref|NP_542368.1| expressed in non-metastatic cells 5 [Mus musculus]
           gi|13377847|gb|AAK20866.1| NME5 [Mus musculus]
          Length = 211

 Score =  106 bits (265), Expect = 1e-22
 Identities = 56/115 (48%), Positives = 74/115 (63%)
 Frame = +2

Query: 140 LEKTFALIKPDAVRAGKAQEIMQLIELNGFTIIAKQKLQLTRARAEEFYGEHKGKEFFPK 319
           +EKT ALIKPD V   K +EI  +I  +GFTII ++KL L+      FY E  GK FFP 
Sbjct: 12  VEKTLALIKPDVV--DKEEEIQDIILGSGFTIIQRRKLHLSPEHCSNFYVEQYGKMFFPN 69

Query: 320 LVNFMTSGPIWALVLAKPGAILAWRALMGPTNVFKARAEQPKCLRALYGTDGTQN 484
           L  +M+SGP+ A++LA+  AI  W+ LMGP+N   A+   P  LRA+YGTD  +N
Sbjct: 70  LTAYMSSGPLVAMILARHKAISYWKELMGPSNSLVAKETHPDSLRAIYGTDELRN 124

>sp|Q99MH5|NDK5_MOUSE Nucleoside diphosphate kinase homolog 5 (NDK-H 5) (NDP kinase
           homolog 5) (nm23-M5)
          Length = 211

 Score =  106 bits (265), Expect = 1e-22
 Identities = 56/115 (48%), Positives = 74/115 (63%)
 Frame = +2

Query: 140 LEKTFALIKPDAVRAGKAQEIMQLIELNGFTIIAKQKLQLTRARAEEFYGEHKGKEFFPK 319
           +EKT ALIKPD V   K +EI  +I  +GFTII ++KL L+      FY E  GK FFP 
Sbjct: 12  VEKTLALIKPDVV--DKEEEIQDIILGSGFTIIQRRKLHLSPEHCSNFYVEQYGKMFFPN 69

Query: 320 LVNFMTSGPIWALVLAKPGAILAWRALMGPTNVFKARAEQPKCLRALYGTDGTQN 484
           L  +M+SGP+ A++LA+  AI  W+ LMGP+N   A+   P  LRA+YGTD  +N
Sbjct: 70  LTAYMSSGPLVAMILARHKAISYWKELMGPSNSLVAKETHPDSLRAIYGTDELRN 124

>ref|NP_572965.1| CG5310-PA [Drosophila melanogaster]
           gi|7595825|gb|AAF64467.1|AF241151_1 type 6 nucleoside
           diphosphate kinase [Drosophila melanogaster]
           gi|7595829|gb|AAF64469.1|AF241152_1 type 6 nucleoside
           diphosphate kinase [Drosophila melanogaster]
           gi|22832234|gb|AAF48378.2| CG5310-PA [Drosophila
           melanogaster]
          Length = 151

 Score =  104 bits (260), Expect = 5e-22
 Identities = 50/115 (43%), Positives = 74/115 (63%)
 Frame = +2

Query: 140 LEKTFALIKPDAVRAGKAQEIMQLIELNGFTIIAKQKLQLTRARAEEFYGEHKGKEFFPK 319
           +E T ALIKP  +R   A + ++ +    FTI+ ++++ +T+  +E FY EHKGK F+ +
Sbjct: 1   MEITLALIKPHVLRNTYAMQQIRALISQNFTILDQKEVCITKELSERFYAEHKGKFFYHR 60

Query: 320 LVNFMTSGPIWALVLAKPGAILAWRALMGPTNVFKARAEQPKCLRALYGTDGTQN 484
           L +FM SGP +AL+L     I  WR+L+GPT VF+A    P C+RALYG   T+N
Sbjct: 61  LTSFMNSGPSYALILQSETCIQKWRSLLGPTKVFRAVYSDPNCIRALYGISDTRN 115

>ref|NP_835172.1| non-metastatic cells 7, protein expressed in; nucleoside
           diphosphate kinase 7; nucleoside-diphosphate kinase [Mus
           musculus] gi|26351511|dbj|BAC39392.1| unnamed protein
           product [Mus musculus]
          Length = 277

 Score =  104 bits (259), Expect = 6e-22
 Identities = 51/114 (44%), Positives = 76/114 (65%)
 Frame = +2

Query: 143 EKTFALIKPDAVRAGKAQEIMQLIELNGFTIIAKQKLQLTRARAEEFYGEHKGKEFFPKL 322
           EKT ALIKPDAV   KA EI+++I  +GFTI   + + LTR  A +F+ +H  + F+ +L
Sbjct: 111 EKTLALIKPDAV--SKAGEIIEMINKSGFTITKLRMMTLTRKEAADFHVDHHSRPFYNEL 168

Query: 323 VNFMTSGPIWALVLAKPGAILAWRALMGPTNVFKARAEQPKCLRALYGTDGTQN 484
           + F+TSGP+ A+ + +  AI  W+ L+GP N   +R + P  +RAL+GTDG +N
Sbjct: 169 IQFITSGPVIAMEILRDDAICEWKRLLGPANSGLSRTDAPGSIRALFGTDGVRN 222

>ref|NP_612187.1| non-metastatic cells 7, protein expressed in; nucleoside
           diphosphate kinase 7; nucleoside-diphosphate kinase [Mus
           musculus] gi|12230347|sp|Q9QXL8|NDK7_MOUSE Nucleoside
           diphosphate kinase 7 (NDK 7) (NDP kinase 7) (nm23-M7)
           gi|6644103|gb|AAF20906.1|AF202048_1 NM23-M7 [Mus
           musculus]
          Length = 395

 Score =  104 bits (259), Expect = 6e-22
 Identities = 51/114 (44%), Positives = 76/114 (65%)
 Frame = +2

Query: 143 EKTFALIKPDAVRAGKAQEIMQLIELNGFTIIAKQKLQLTRARAEEFYGEHKGKEFFPKL 322
           EKT ALIKPDAV   KA EI+++I  +GFTI   + + LTR  A +F+ +H  + F+ +L
Sbjct: 111 EKTLALIKPDAV--SKAGEIIEMINKSGFTITKLRMMTLTRKEAADFHVDHHSRPFYNEL 168

Query: 323 VNFMTSGPIWALVLAKPGAILAWRALMGPTNVFKARAEQPKCLRALYGTDGTQN 484
           + F+TSGP+ A+ + +  AI  W+ L+GP N   +R + P  +RAL+GTDG +N
Sbjct: 169 IQFITSGPVIAMEILRDDAICEWKRLLGPANSGLSRTDAPGSIRALFGTDGVRN 222

 Score = 52.4 bits (124), Expect = 3e-06
 Identities = 36/113 (31%), Positives = 54/113 (46%), Gaps = 1/113 (0%)
 Frame = +2

Query: 149 TFALIKPDAVRAGKAQEIMQLIELNGFTIIAKQKLQLTRARAEEFYGEHKGK-EFFPKLV 325
           T  +IKP A+  G   + +  I    F + A Q   L RA  EEFY  +KG    +  +V
Sbjct: 259 TCCIIKPHAISEGMLGKNLIAIRDACFGMSAIQMFNLDRANVEEFYEVYKGVVSEYNDMV 318

Query: 326 NFMTSGPIWALVLAKPGAILAWRALMGPTNVFKARAEQPKCLRALYGTDGTQN 484
             + SGP  A+ + +      +R   GP +   AR  +P+ LRA++G    QN
Sbjct: 319 TELCSGPCVAIEIQQSNPTKTFREFCGPADPEIARHLRPETLRAIFGKTKVQN 371



EST assemble image


clone accession position
1 HCL044a09_r AV642019 1 266
2 HCL100g10_r AV645300 11 486




Chlamydomonas reinhardtii
Kazusa DNA Research Institute