KCC002479A_c01
[Fasta Sequence]
[Nr Search]
[EST assemble image]
Fasta Sequence
>KCC002479A_C01 KCC002479A_c01
CGCACGTAATACCAATTTGTTCTTACATTGTAAATTCCGGGGGAAGCCCACTTCGTTCAC
TCCTGCGAAACAAATTCACTAAAGTAAGCCTGAGGTAGACTGCAATACGTGAAATGCGTT
TACGCCGCTGTGCACATTTTCTGCAAGACGGCGAGTGCAGCGCTCGGGAAGGTCGGGAAG
CTGACGCACCAAGCGCGTCACAATGTCGAAAGCCAGAAGCACATTGAGCATCGGGACCAT
ATCAGAGCCACAGGTCGCCAGCGTGCTCCAATCTCCAGGGCGACAATTACGCCATCACCA
TGCATGTTCCCTGCACGACTTGTGCGCGCTGTGCCAGGAGACAGCGTCTCACTTCCAGTA
TGCAGAGCTGGAGACGCCGGCGTCTCCCGACGGACCACAGCCAGAGAGCACACGCGTGGC
CGCACACGATGTGTGGCACCTACTGCTGGAGTCCCCGCTCGCCCACACCAGCGTCACGCT
GCGGCAGCGGCTGCACCTGCGAAGCCTGGTTCTACCGCCCCCCTCGGCGCTGCACCCCGC
TGAGGCGCCGGCGCAGCTGGTAATGCGCAAGGGCGTGTGGCTGTGGCGAGACCAGGTCGA
CGCCACGCCGCCCAGTGCCAGCGGCACAATCACGCCCGCCGCCTCGGCGGCCGCGGTGCC
CGGCTACGAGGACACGCCGCCCGACCGCATCCGCCGCGCGCTCAATGGTGAGGGCAACGG
nCCCTCGCGCCTGGGCCCTGATGACCACGTGCGCCGCATGTTCGCCTGCCGGGATGCGCT
GGTG
Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC002479A_C01 KCC002479A_c01
(784 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_523475.2| Salivary gland secretion 1 CG3047-PA [Drosophil... 50 5e-05
ref|NP_573340.1| CG7349-PA [Drosophila melanogaster] gi|22832534... 47 3e-04
gb|AAL90301.1| RE03249p [Drosophila melanogaster] 47 3e-04
ref|ZP_00091641.1| COG0477: Permeases of the major facilitator s... 46 6e-04
ref|ZP_00137413.1| COG2199: FOG: GGDEF domain [Pseudomonas aerug... 45 0.001
>ref|NP_523475.2| Salivary gland secretion 1 CG3047-PA [Drosophila melanogaster]
gi|28380257|gb|AAF50957.3| CG3047-PA [Drosophila
melanogaster]
Length = 1225
Score = 49.7 bits (117), Expect = 5e-05
Identities = 56/190 (29%), Positives = 71/190 (36%), Gaps = 22/190 (11%)
Frame = +3
Query: 255 SPACSNLQGDNYAITMHVPCTTCARCARRQRLTSSMQSWR------RRRLPTDHSQRAHA 416
+P CS QG T PCT CA+ R T++ + R R T S+
Sbjct: 202 TPTCST-QG-----TQTTPCT-CAQTTTTPRSTTTTSTSRPTTTTPRSTTTTTTSRPTTT 254
Query: 417 WPHTMCGTYCWSPRSPTPASRCGSGCTCEAWFYRPPRRCTPLRRRRSW*CARACG----- 581
P + T P + TP RC + + A PR T R C
Sbjct: 255 TPRSTTTTTTRRPTTTTP--RCTTTTSTCAPTTTTPRSTTTTTTSRPTTTTPRCTTTTST 312
Query: 582 CGETRSTPRRPVPAAQSRPPPRRPRCPATR----TRRPTASAARSMV-------RATXPR 728
C TR+TPR + SRP PRC T TRRPT + RS T PR
Sbjct: 313 CSPTRTTPRSTTTTSTSRPTTTTPRCTTTPSTTCTRRPTTTTPRSTTTTCTSGPTTTTPR 372
Query: 729 AWALMTTCAA 758
+ TTC +
Sbjct: 373 --STTTTCTS 380
Score = 44.3 bits (103), Expect = 0.002
Identities = 42/157 (26%), Positives = 52/157 (32%), Gaps = 8/157 (5%)
Frame = +3
Query: 309 PCTTCARCARRQRLTSSMQSWRRRRLPTDHSQRAHAWPHTMCGTYCWSPRSPTPASRCGS 488
P TT R + + R T S P + T P + TP S +
Sbjct: 798 PTTTTPRSTTTTSTSGPTTTTPRSTTTTSTSGPTTTTPRSTTTTSTSGPTTTTPRSTTTT 857
Query: 489 GCTCEAWFYRPPRRCTPLRRRRSW*CARACGCGETRSTPRRPVPAAQSRPPPRRPR---- 656
+C P TP RS C G T +TPR S P PR
Sbjct: 858 STSC-------PTTTTP----RS--TTTTCTSGPTTTTPRSTTTTCTSCPTTTTPRSTTT 904
Query: 657 ----CPATRTRRPTASAARSMVRATXPRAWALMTTCA 755
CP T T R T + S T PR+ +TCA
Sbjct: 905 TCTSCPTTTTPRSTTTTCTSGPTTTTPRSTTKTSTCA 941
Score = 40.8 bits (94), Expect = 0.025
Identities = 40/156 (25%), Positives = 52/156 (32%), Gaps = 8/156 (5%)
Frame = +3
Query: 312 CTTCARCARRQRLTSSMQSWRRRRLPTDHSQRAHAWPHTMCGTYCWSPRSPTPASRCGSG 491
CT+C + T++ S P + + P T +PRS T S C
Sbjct: 890 CTSCPTTTTPRSTTTTCTSCPTTTTPRSTTTTCTSGPTTT------TPRSTTKTSTCAPT 943
Query: 492 CTCEAWFYRPPRRCTPLRRRRSW*CARACGCGETRSTPRRPVPAAQSRPPPRRPRC---- 659
T PR T R T +TPR SRP PR
Sbjct: 944 TTT-------PRSTTTTSTSRP-----------TTTTPRSTTTTTTSRPTTTTPRSTTTP 985
Query: 660 ----PATRTRRPTASAARSMVRATXPRAWALMTTCA 755
P T T R T + + S T PR+ +TCA
Sbjct: 986 STSRPTTTTPRSTTTTSTSRPTTTTPRSTTKTSTCA 1021
Score = 38.1 bits (87), Expect = 0.16
Identities = 43/168 (25%), Positives = 55/168 (32%), Gaps = 17/168 (10%)
Frame = +3
Query: 297 TMHVPCTTCARCARRQRLTSSMQSWRRRRLPTDHSQRAHAWPH-----TMCGTYCWSPRS 461
T P TT RC + + R T S+ P + C +PRS
Sbjct: 263 TTRRPTTTTPRCTTTTSTCAPTTTTPRSTTTTTTSRPTTTTPRCTTTTSTCSPTRTTPRS 322
Query: 462 PTPASRCGSGCTCEAWFYRPPRRCTPLRRRRSW*CARA----CGCGETRSTPRRPVPAAQ 629
T S T P CT RR + R+ C G T +TPR
Sbjct: 323 TTTTSTSRPTTTTPRCTTTPSTTCT---RRPTTTTPRSTTTTCTSGPTTTTPRSTTTTCT 379
Query: 630 SRPPPRRPRC--------PATRTRRPTASAARSMVRATXPRAWALMTT 749
S P PR P T T R T + + S T PR+ +T
Sbjct: 380 SGPTTTTPRSTTTTSTSGPTTTTPRSTTTTSTSGPTTTTPRSTTTTST 427
Score = 35.4 bits (80), Expect = 1.0
Identities = 38/153 (24%), Positives = 54/153 (34%), Gaps = 8/153 (5%)
Frame = +3
Query: 315 TTCARCARRQRLTSSMQSWRRRRLPTDHSQRAHAWPHTMCGTYCWSPRSPTPASRCGSGC 494
+TCA R T++ + R PT + R+ T T + TP++ +
Sbjct: 938 STCAPTTTTPRSTTTTSTSR----PTTTTPRSTTTTTTSRPTTTTPRSTTTPSTSRPTTT 993
Query: 495 TCEAWFYRPPRRCTPLRRRRSW*CARACGCGETRSTPRRPVPAAQSRPPPRRPRC----- 659
T + R T R + + C T +TPR SRP PR
Sbjct: 994 TPRSTTTTSTSRPTTTTPRST---TKTSTCAPTTTTPRSTTTTTTSRPTTTTPRSTTTTT 1050
Query: 660 ---PATRTRRPTASAARSMVRATXPRAWALMTT 749
P T T R T + S T PR+ TT
Sbjct: 1051 TSRPTTTTPRSTTTPCTSRPTTTTPRSTTTTTT 1083
Score = 33.5 bits (75), Expect = 3.9
Identities = 41/170 (24%), Positives = 52/170 (30%), Gaps = 24/170 (14%)
Frame = +3
Query: 312 CTTCARCARRQRLTSSMQSWRRRRLPTDHSQRAHAWPHTMCGTYCWSPRSPTPASRCGSG 491
CTT R T + PT + R P T C R PT + +
Sbjct: 306 CTTTTSTCSPTRTTPRSTTTTSTSRPTTTTPRCTTTPSTTC------TRRPTTTTPRSTT 359
Query: 492 CTCEAWFYRPPRRCTPLRRRRSW*CARACGCGETRSTPRRPVPAAQSRPPPRRPRC---- 659
TC + P TP RS C G T +TPR + S P PR
Sbjct: 360 TTCTSG----PTTTTP----RS--TTTTCTSGPTTTTPRSTTTTSTSGPTTTTPRSTTTT 409
Query: 660 --------------------PATRTRRPTASAARSMVRATXPRAWALMTT 749
P T T R T + + S T PR+ +T
Sbjct: 410 STSGPTTTTPRSTTTTSTSGPTTTTPRSTTTTSTSGPTTTTPRSTTTTST 459
Score = 33.1 bits (74), Expect = 5.1
Identities = 32/115 (27%), Positives = 38/115 (32%), Gaps = 8/115 (6%)
Frame = +3
Query: 450 SPRSPTPASRCGSGCTCEAWFYRPPRRCTPLRRRRSW*CARACGCGETRSTPRRPVPAAQ 629
+PRS T S C T PR T R T +TPR
Sbjct: 1010 TPRSTTKTSTCAPTTTT-------PRSTTTTTTSRP-----------TTTTPRSTTTTTT 1051
Query: 630 SRPPPRRPRC--------PATRTRRPTASAARSMVRATXPRAWALMTTCAACSPA 770
SRP PR P T T R T + S T PR + T C +P+
Sbjct: 1052 SRPTTTTPRSTTTPCTSRPTTTTPRSTTTTTTSRPTTTTPR--STTTPCPTTTPS 1104
>ref|NP_573340.1| CG7349-PA [Drosophila melanogaster] gi|22832534|gb|AAF48905.2|
CG7349-PA [Drosophila melanogaster]
Length = 437
Score = 47.4 bits (111), Expect = 3e-04
Identities = 47/159 (29%), Positives = 58/159 (35%), Gaps = 1/159 (0%)
Frame = +1
Query: 223 IEHRDHIRATGRQRAPISRATITPSPCMFPARLVRAVPGDSVSL-PVCRAGDAGVSRRTT 399
+ +RD R AP+S +I P P L A P +VSL P C +
Sbjct: 24 LANRDVSEPVSRPAAPMSTLSI-PGPA-----LAAATPVSAVSLVPRCTHSSLQGGGQGA 77
Query: 400 AREHTRGRTRCVAPTAGVPARPHQRHAAAAAAPAKPGSTAPLGAAPR*GAGAAGNAQGRV 579
RG + G+ + AA A AKPG AP GAA GA AG
Sbjct: 78 GGRGLRGSATGGSAAGGIATKRQYSGGAAPAGAAKPGGAAPAGAAKPGGAAPAG------ 131
Query: 580 AVARPGRRHAAQCQRHNHARRLGGRGARLRGHAARPHPP 696
A+PG AA G+ A A P PP
Sbjct: 132 -AAKPGGAAAAAAGSAKPGGASTGKPASGNAPATPPPPP 169
Score = 35.4 bits (80), Expect = 1.0
Identities = 22/44 (50%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Frame = -3
Query: 566 ALPAAPAPQRGAAPRGAVEPGFAGAAAAAA*RWCGRA-GTPAVG 438
A PA A GAAP GA +PG A AAAA + + G + G PA G
Sbjct: 116 AAPAGAAKPGGAAPAGAAKPGGAAAAAAGSAKPGGASTGKPASG 159
>gb|AAL90301.1| RE03249p [Drosophila melanogaster]
Length = 437
Score = 47.4 bits (111), Expect = 3e-04
Identities = 47/159 (29%), Positives = 58/159 (35%), Gaps = 1/159 (0%)
Frame = +1
Query: 223 IEHRDHIRATGRQRAPISRATITPSPCMFPARLVRAVPGDSVSL-PVCRAGDAGVSRRTT 399
+ +RD R AP+S +I P P L A P +VSL P C +
Sbjct: 24 LANRDVSEPVSRPAAPMSTLSI-PGPA-----LAAATPVSAVSLVPRCTHSSLQGGGQGA 77
Query: 400 AREHTRGRTRCVAPTAGVPARPHQRHAAAAAAPAKPGSTAPLGAAPR*GAGAAGNAQGRV 579
RG + G+ + AA A AKPG AP GAA GA AG
Sbjct: 78 GGRGLRGSATGGSAAGGIATKRQYSGGAAPAGAAKPGGAAPAGAAKPGGAAPAG------ 131
Query: 580 AVARPGRRHAAQCQRHNHARRLGGRGARLRGHAARPHPP 696
A+PG AA G+ A A P PP
Sbjct: 132 -AAKPGGAAAAAAGSAKPGGASTGKPASGNAPATPPPPP 169
Score = 35.4 bits (80), Expect = 1.0
Identities = 22/44 (50%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Frame = -3
Query: 566 ALPAAPAPQRGAAPRGAVEPGFAGAAAAAA*RWCGRA-GTPAVG 438
A PA A GAAP GA +PG A AAAA + + G + G PA G
Sbjct: 116 AAPAGAAKPGGAAPAGAAKPGGAAAAAAGSAKPGGASTGKPASG 159
>ref|ZP_00091641.1| COG0477: Permeases of the major facilitator superfamily
[Azotobacter vinelandii]
Length = 881
Score = 46.2 bits (108), Expect = 6e-04
Identities = 62/196 (31%), Positives = 70/196 (35%), Gaps = 24/196 (12%)
Frame = -3
Query: 779 AHPGRRTCGARG---HQGPGARXRCP-HH*ARGGCGRAAC---PRSRAPRPPRRRA*LCR 621
A GRR AR G GAR P HH AR GCG A PR P RR R
Sbjct: 213 ARTGRRRAPARTGVLEPGAGARRAHPRHHPARLGCGNAGVRPDPRRSGALYPHRRCRHRR 272
Query: 620 WHWA---AWRRPGLATA---------TRPCALPAAPA--PQRGAAPRGAVEPGFAGAAAA 483
H A RR G + +R LP PA P+RG R A F +
Sbjct: 273 GHLGSGHARRRVGESAGAGERSQPVRSRQRRLPGQPAQLPRRGGKRRRASVDRFRAIRSH 332
Query: 482 AA*RWCGRAGTPA-VGATHRVRPRVC--SLAVVRRETPASPALHTGSETLSPGTARTSRA 312
R R G PA G H R A +RR+ P G+ G +R
Sbjct: 333 RHVRRRARLGPPAPAGHPHGPRHAAAQPGAARLRRDPPLRARAACGARRARAGPRADARP 392
Query: 311 GNMHGDGVIVALEIGA 264
G G G A GA
Sbjct: 393 GRRGGAGQSFAARAGA 408
>ref|ZP_00137413.1| COG2199: FOG: GGDEF domain [Pseudomonas aeruginosa UCBPP-PA14]
Length = 581
Score = 45.4 bits (106), Expect = 0.001
Identities = 38/108 (35%), Positives = 45/108 (41%), Gaps = 4/108 (3%)
Frame = +1
Query: 193 ARHNVESQKHIEHRDHIRATGRQRAPISRATITPSPCMFPARLVRAVPGDSVSLPVCRAG 372
A H+ + Q+H R H R GRQ P RA P PAR VRA R G
Sbjct: 481 AGHDADGQRH--PRPH-RTAGRQALPAPRAVQPARPVRQPARAVRA----------ARRG 527
Query: 373 DAGVSRRTTARE---HTRGRTRCVAPTAGVPARPH-QRHAAAAAAPAK 504
+ R T R+ H R R R P AG+P R Q H PA+
Sbjct: 528 EGPALRPATGRQPAGHPRRRCRQAGPGAGLPGRQRDQVHRQGQRHPAR 575
EST assemble image
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clone |
accession |
position |
| 1 |
MXL050d10_r |
BP095980 |
1 |
236 |
| 2 |
MXL024f08_r |
BP094540 |
111 |
453 |
| 3 |
MXL009g04_r |
BP093532 |
111 |
520 |
| 4 |
HCL052b11_r |
AV642458 |
112 |
613 |
| 5 |
MXL074g03_r |
BP097381 |
119 |
537 |
| 6 |
LCL084g01_r |
AV630816 |
123 |
544 |
| 7 |
MXL029b01_r |
BP094767 |
132 |
515 |
| 8 |
HCL043d12_r |
AV641984 |
137 |
613 |
| 9 |
MXL072c07_r |
BP097238 |
150 |
515 |
| 10 |
MXL007h12_r |
BP093405 |
169 |
609 |
| 11 |
MXL066f10_r |
BP096896 |
411 |
905 |
| 12 |
MX252a10_r |
BP092285 |
543 |
664 |
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Chlamydomonas reinhardtii
Kazusa DNA Research Institute