Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC002476A_C01 KCC002476A_c01
(504 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|ZP_00082156.1| COG1066: Predicted ATP-dependent serine prote... 44 9e-04
dbj|BAC98125.1| mKIAA1236 protein [Mus musculus] 44 9e-04
ref|ZP_00139773.1| COG1629: Outer membrane receptor proteins, mo... 44 0.001
ref|NP_821742.1| hypothetical protein [Streptomyces avermitilis ... 42 0.003
ref|ZP_00059343.1| COG4760: Predicted membrane protein [Thermobi... 41 0.007
>ref|ZP_00082156.1| COG1066: Predicted ATP-dependent serine protease [Geobacter
metallireducens]
Length = 444
Score = 44.3 bits (103), Expect = 9e-04
Identities = 38/112 (33%), Positives = 43/112 (37%), Gaps = 5/112 (4%)
Frame = +2
Query: 182 PPCTPSAFPLGHGNSPEPGAGHLPLPPRRGAAARGDVCGPHHHRGRRAQPS-----TPQA 346
P C P P G +P GAGHLP RRG R P + R QPS +P
Sbjct: 330 PSCPPGGRPRQEGGTPHGGAGHLPECRRRGEGKRTG-RRPRYGGRPRLQPSGQGHRSPDG 388
Query: 347 GRAALAAALAGPAAAPRRVPAVHAGRVRQHHGRAHVGRLPYTGVVRRPAAGS 502
G G P P G+ R + GR H R P G RR GS
Sbjct: 389 GCGRGGTGRRGAGHNPAGNPGTGGGQARLYPGR-HPRRQPQAG-DRRGGDGS 438
>dbj|BAC98125.1| mKIAA1236 protein [Mus musculus]
Length = 1309
Score = 44.3 bits (103), Expect = 9e-04
Identities = 41/104 (39%), Positives = 45/104 (42%), Gaps = 18/104 (17%)
Frame = +2
Query: 194 PSAFP-LGHG----NSPEPGAGHLPLPPRRGAAARGDVCGPHHHR--GRRAQPSTPQAGR 352
PSA P LG NSP G G PP GA R GP R G +P P AG+
Sbjct: 888 PSASPPLGPAPACRNSPAKGVGATK-PPAGGAKGRN--LGPSTSRALGAPVKPLGPVAGK 944
Query: 353 AALAAALAGPAAAPRRVPAV--HAGR---------VRQHHGRAH 451
A A+ GP AAPR VP + AGR R H R H
Sbjct: 945 TAAGGAVPGPRAAPRAVPGIGAKAGRGTIMGTKQAFRAAHSRVH 988
>ref|ZP_00139773.1| COG1629: Outer membrane receptor proteins, mostly Fe transport
[Pseudomonas aeruginosa UCBPP-PA14]
Length = 1048
Score = 43.5 bits (101), Expect = 0.001
Identities = 31/99 (31%), Positives = 40/99 (40%), Gaps = 4/99 (4%)
Frame = +1
Query: 205 SPRPWQLPRAWCWASPSSAQARRRSTRR---CVWTPPP-PWPTCATIYTSSWACRPRGSA 372
SPRPW W W S RRSTR+ C W P P CA + P A
Sbjct: 10 SPRPWS---RWAWPRRSGW---RRSTRKPGCCRWAPAPVAGRRCANASNGTSGSTPSSPA 63
Query: 373 GWPCSSATPGASCTCRQGTTTPWSRSCWTTAVHWRRTAA 489
PC+S TP ++ + P S W WR +++
Sbjct: 64 RRPCASPTPPSTSVSTPPPSAPISHR-WCRRRAWRNSSS 101
>ref|NP_821742.1| hypothetical protein [Streptomyces avermitilis MA-4680]
gi|29604206|dbj|BAC68277.1| hypothetical protein
[Streptomyces avermitilis MA-4680]
Length = 481
Score = 42.4 bits (98), Expect = 0.003
Identities = 36/89 (40%), Positives = 42/89 (46%), Gaps = 21/89 (23%)
Frame = +1
Query: 190 HPQCISPRPWQLPRAWCWASPSSAQARRRST-RRC----------VW-----TPPPPW-- 315
HP+ SP PW+ P A C PSSA A +T RC W TPPPPW
Sbjct: 349 HPR--SP-PWRSPAATCLLPPSSAWAATGTTSSRCPVPGSHSWWATWSATASTPPPPWAG 405
Query: 316 --PTCATIYTSSWACRPRGSA-GWPCSSA 393
P CA TS+ CRP S+ W SS+
Sbjct: 406 CGPPCAPSPTST--CRPTNSSPTWTTSSS 432
>ref|ZP_00059343.1| COG4760: Predicted membrane protein [Thermobifida fusca]
Length = 561
Score = 41.2 bits (95), Expect = 0.007
Identities = 33/99 (33%), Positives = 44/99 (44%), Gaps = 17/99 (17%)
Frame = +1
Query: 241 WASPS-SAQARRRSTRRCVWT----PP--PPWPTCATIYTSS---------WACRPRGSA 372
W +P SA+ +R R WT PP PPW +C + ++S P+ +A
Sbjct: 6 WTTPGRSARPLKRWAPRSPWTWKTTPPRTPPWTSCTSSASTSPGPGLCSRPTCGAPKPTA 65
Query: 373 G-WPCSSATPGASCTCRQGTTTPWSRSCWTTAVHWRRTA 486
G WPC PG C C + TT R W TA + TA
Sbjct: 66 GTWPC----PGRGCACAKAPTTSLLR--WPTATGPKWTA 98
