Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC002464A_C01 KCC002464A_c01
(508 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAC83941.1| hypothetical protein [Oryza sativa (japonica cul... 37 0.14
dbj|BAC40309.1| unnamed protein product [Mus musculus] 37 0.18
pir||S39206 proline-rich protein V-beta 1 precursor - rat gi|433... 30 0.28
sp|P33485|VNUA_PRVKA PROBABLE NUCLEAR ANTIGEN gi|418708|pir||B45... 31 0.81
gb|AAH44006.1| Similar to core-binding factor, runt domain, alph... 34 0.92
>dbj|BAC83941.1| hypothetical protein [Oryza sativa (japonica cultivar-group)]
Length = 121
Score = 37.0 bits (84), Expect = 0.14
Identities = 22/51 (43%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Frame = +1
Query: 298 RARGKCHSAASCNSEREDAGAPPC*TNALTATGRRRHASA-LRHPPPPPPR 447
R R + H+AA+ + R PP +A AT +RHA+A + PPPPPPR
Sbjct: 5 RRRRRRHTAAAFAAAR---AKPPPPRHAAAATASQRHAAAAVATPPPPPPR 52
>dbj|BAC40309.1| unnamed protein product [Mus musculus]
Length = 101
Score = 36.6 bits (83), Expect = 0.18
Identities = 21/46 (45%), Positives = 24/46 (51%), Gaps = 3/46 (6%)
Frame = -3
Query: 419 RAEACRRRPVAVNALVQHGGA---PASSRSELHDAAEWHFPRARNP 291
RA A RPVAV GGA A+ R+ DA W FPR R+P
Sbjct: 9 RAAAWAARPVAVCWTAARGGAGLGEATERAPARDAGAWGFPRGRDP 54
>pir||S39206 proline-rich protein V-beta 1 precursor - rat
gi|433617|emb|CAA52300.1| VCS-beta1 [Rattus rattus]
gi|471332|emb|CAA54831.1| PR-Vbeta1 [Rattus norvegicus]
Length = 148
Score = 29.6 bits (65), Expect(2) = 0.28
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +1
Query: 427 PPPPPPRAHFYPTLNTVNP*CHQPPSS 507
PPPPPP FYP +P H+PP++
Sbjct: 81 PPPPPPPFGFYPPY-IPHPPHHRPPAN 106
Score = 25.4 bits (54), Expect(2) = 0.28
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +1
Query: 394 GRRRHASALRHPPPPPP 444
G R H R PPPPPP
Sbjct: 25 GPRGHDPRRRPPPPPPP 41
>sp|P33485|VNUA_PRVKA PROBABLE NUCLEAR ANTIGEN gi|418708|pir||B45344 probable nuclear
antigen - suid herpesvirus 1 (strain Kaplan)
gi|334072|gb|AAA47471.1| ORF-3 protein
Length = 1733
Score = 31.2 bits (69), Expect(2) = 0.81
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +1
Query: 385 TATGRRRHASALRHPPPPPPRAHF 456
T T H HPPPPP R HF
Sbjct: 17 TTTRDHHHQQHHHHPPPPPSRTHF 40
Score = 21.9 bits (45), Expect(2) = 0.81
Identities = 11/27 (40%), Positives = 15/27 (54%), Gaps = 2/27 (7%)
Frame = +1
Query: 430 PPPPPRAHFYPT--LNTVNP*CHQPPS 504
PP PP+ H PT + +P H PP+
Sbjct: 73 PPRPPQDHHRPTPARDHRDPRDHLPPT 99
>gb|AAH44006.1| Similar to core-binding factor, runt domain, alpha subunit 2;
translocated to, 2 [Xenopus laevis]
Length = 586
Score = 34.3 bits (77), Expect = 0.92
Identities = 30/98 (30%), Positives = 39/98 (39%), Gaps = 15/98 (15%)
Frame = +1
Query: 208 RARALQPSQ--SRH----LNTCFAQFCKALDVRQGFRARGKCHSAASCNSEREDAGAPPC 369
RA PSQ ++H LNT + + ++ GK HS ERE A A P
Sbjct: 183 RAAKQTPSQYLAQHEHILLNTSTSSPADSSELLMELNGNGKRHSPDRREEERETAPAEPP 242
Query: 370 *TNALTATGRRRHASALRHP---------PPPPPRAHF 456
T + RH+ AL P P PPP H+
Sbjct: 243 VKRVCTISPAPRHSPALSLPLVNSTSHFHPTPPPLQHY 280