KCC002461A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC002461A_C01 KCC002461A_c01
cctcagcgtcaggcgctgccgcgcagggtgggctggctcgggggctgcgcaagctgatag
gccgcagctctcgcaactcaGCCGGAATCACCCCTAGCTGCTCGCCACGCTGCGTGGCGT
CGCCGTGTGGCTCCGCCACTGCCAACGGCGGCACCGGCGGCGCTGGCCTGGGCCCCGCCG
CCTGCACCCTGGTGTCCCGGATCCAGGATTCCATCTTGTACGACAGCGAGATGGATCAGC
TGGAACAGGATCGTGCCTACCTGCTTCATAGGATCCAGGGCATGCGCGACTTCCTCGCCA
GCCTGTCGGCATCGGCATCATCACCCCCTTCGTCTTCACCCGCATCGCCGTCGGCAGCGG
CGTCTTGCCGCGCCGCGGAGCAGGCGGCGGCGGCGGCGTCGCTGTTGCAGAGCGAGGTGC
TGCTGGCGGCGGTGGACGCGCGTGTGGCGGTCATGCGCGAGCTGGAGGAGTTGCAGACCT
CCACTGCCTCCTCCTATTTCCGATCGGCCGCCGCCAAGGCTGTGGCAACGGCCGCCTGCA
GCGGCGGCACCATCCCCAACGCCACGACGGCGCGATGTGACACCCCCAAGCTGTCGCCTG
CTGGCTCGCTCGGGCTGTCAGAGGCGGAGGACCTTGGGCAGGTGCTGCGCAAGCGGCGTA
GCCTGCGCTGGCTGCCGACGTGCTTTG


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC002461A_C01 KCC002461A_c01
         (687 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

emb|CAE45928.1| hypothetical protein [Homo sapiens]                    57  3e-07
gb|AAD45972.1|AF106062_1 Wiskott-Aldrich syndrome protein intera...    57  3e-07
ref|NP_045322.1| very large virion protein (tegument) [Bovine he...    49  4e-07
ref|NP_767161.1| blr0521 [Bradyrhizobium japonicum] gi|27348769|...    55  5e-07
ref|XP_311109.1| ENSANGP00000017356 [Anopheles gambiae] gi|21293...    45  2e-06

>emb|CAE45928.1| hypothetical protein [Homo sapiens]
          Length = 510

 Score = 56.6 bits (135), Expect = 3e-07
 Identities = 37/102 (36%), Positives = 47/102 (45%), Gaps = 3/102 (2%)
 Frame = -1

Query: 525 PQPWRRPIGNRRRQWRSATPPARA*PPHARPPPPAAPR---SATATPPPPPAPRRGKTPL 355
           P P   P+GNR    R A PP    P + +PP P+ PR   S+ A PPPPP  R G  PL
Sbjct: 264 PPPPPPPVGNRPSIHREAVPPPP--PQNNKPPVPSTPRPSASSQAPPPPPPPSRPGPPPL 321

Query: 354 PTAMRVKTKGVMMPMPTGWRGSRACPGSYEAGRHDPVPADPS 229
           P +     +   +P       S + P     GR  P+P  PS
Sbjct: 322 PPSSSGNDETPRLPQ-RNLSLSSSTPPLPSPGRSGPLPPPPS 362

 Score = 38.1 bits (87), Expect = 0.13
 Identities = 35/118 (29%), Positives = 42/118 (34%), Gaps = 4/118 (3%)
 Frame = -1

Query: 531 PLPQPWRRPIGNRRRQWRSATPPARA*PPHARPPPPA--APRSATATPPPPPAPRRGKT- 361
           PLP P R              PP    PP  RPPPP    P  +   PPPPP  R G T 
Sbjct: 347 PLPSPGRS----------GPLPP----PPSERPPPPVRDPPGRSGPLPPPPPVSRNGSTS 392

Query: 360 -PLPTAMRVKTKGVMMPMPTGWRGSRACPGSYEAGRHDPVPADPSRCRTRWNPGSGTP 190
             LP   ++               SR+   S  +G   P+P D         P +G P
Sbjct: 393 RALPATPQLP--------------SRSGVDSPRSGPRPPLPPD--------RPSAGAP 428

 Score = 37.0 bits (84), Expect = 0.28
 Identities = 34/114 (29%), Positives = 41/114 (35%), Gaps = 11/114 (9%)
 Frame = -1

Query: 537 RRPLPQPWRRPI-GNRRRQWRSAT----PPARA*PPHARPPPPAAPRSATATPPPPPAPR 373
           R+P P P   P  GNR       +    P + + P   RPP P  P  A    PPPP P 
Sbjct: 211 RQPSPGPTPPPFPGNRGTALGGGSIRQSPLSSSSPFSNRPPLPPTPSRALDDKPPPPPPP 270

Query: 372 RGKTP------LPTAMRVKTKGVMMPMPTGWRGSRACPGSYEAGRHDPVPADPS 229
            G  P      +P       K  +   P     S+A P      R  P P  PS
Sbjct: 271 VGNRPSIHREAVPPPPPQNNKPPVPSTPRPSASSQAPPPPPPPSRPGPPPLPPS 324

 Score = 35.4 bits (80), Expect = 0.82
 Identities = 23/58 (39%), Positives = 31/58 (52%), Gaps = 7/58 (12%)
 Frame = +1

Query: 481 PLPPPISDRPPPRLWQRPPAAAAPSPTP---RRRDVT----PPSCRLLARSGCQRRRT 633
           PLPPP S+RPPP + + PP  + P P P    R   T    P + +L +RSG    R+
Sbjct: 356 PLPPPPSERPPPPV-RDPPGRSGPLPPPPPVSRNGSTSRALPATPQLPSRSGVDSPRS 412

 Score = 33.5 bits (75), Expect = 3.1
 Identities = 26/100 (26%), Positives = 39/100 (39%)
 Frame = -1

Query: 531 PLPQPWRRPIGNRRRQWRSATPPARA*PPHARPPPPAAPRSATATPPPPPAPRRGKTPLP 352
           P PQ  + P+ +  R   S+  P    PP    PPP  P S++     P  P+R  +   
Sbjct: 285 PPPQNNKPPVPSTPRPSASSQAPPPPPPPSRPGPPPLPP-SSSGNDETPRLPQRNLSLSS 343

Query: 351 TAMRVKTKGVMMPMPTGWRGSRACPGSYEAGRHDPVPADP 232
           +   + + G   P+P         P     GR  P+P  P
Sbjct: 344 STPPLPSPGRSGPLPPPPSERPPPPVRDPPGRSGPLPPPP 383

 Score = 32.3 bits (72), Expect = 6.9
 Identities = 33/124 (26%), Positives = 40/124 (31%), Gaps = 20/124 (16%)
 Frame = -1

Query: 537 RRPLPQPWRRPIGNRRRQWRSATPPARA*PPHARPPPPAAPRSATATPPPPPAP------ 376
           R P+P P  R           + PP    P   R PPP     +     PPP P      
Sbjct: 149 RFPVPSPGHR-----------SGPPE---PQRNRMPPPRPDVGSKPDSIPPPVPSTPRPI 194

Query: 375 -----RRGKTPLPTAMRVKTKGVMMPMPTGWRGSRACPGSYEA---------GRHDPVPA 238
                 RG  P+P   R  + G   P   G RG+    GS                P+P 
Sbjct: 195 QSSLHNRGSPPVPGGPRQPSPGPTPPPFPGNRGTALGGGSIRQSPLSSSSPFSNRPPLPP 254

Query: 237 DPSR 226
            PSR
Sbjct: 255 TPSR 258

 Score = 32.0 bits (71), Expect = 9.0
 Identities = 15/46 (32%), Positives = 21/46 (45%), Gaps = 9/46 (19%)
 Frame = +1

Query: 478 PPLPPPISDR---------PPPRLWQRPPAAAAPSPTPRRRDVTPP 588
           PP PPP+ +R         PPP    +PP  + P P+   +   PP
Sbjct: 265 PPPPPPVGNRPSIHREAVPPPPPQNNKPPVPSTPRPSASSQAPPPP 310

 Score = 27.3 bits (59), Expect(2) = 4.6
 Identities = 14/37 (37%), Positives = 16/37 (42%)
 Frame = -1

Query: 435 PPPPAAPRSATATPPPPPAPRRGKTPLPTAMRVKTKG 325
           PPPPA        PPPPP      T  PT  + +  G
Sbjct: 4   PPPPA--------PPPPPTFALANTEKPTLNKTEQAG 32

 Score = 24.3 bits (51), Expect(2) = 4.6
 Identities = 13/27 (48%), Positives = 13/27 (48%), Gaps = 1/27 (3%)
 Frame = -2

Query: 209 ILD-PGHQGAGGGAQASAAGAAVGSGG 132
           ILD P   GAGGG      G   G GG
Sbjct: 58  ILDKPKGAGAGGGGGGFGGGGGFGGGG 84

>gb|AAD45972.1|AF106062_1 Wiskott-Aldrich syndrome protein interacting protein [Homo sapiens]
          Length = 312

 Score = 56.6 bits (135), Expect = 3e-07
 Identities = 37/102 (36%), Positives = 47/102 (45%), Gaps = 3/102 (2%)
 Frame = -1

Query: 525 PQPWRRPIGNRRRQWRSATPPARA*PPHARPPPPAAPR---SATATPPPPPAPRRGKTPL 355
           P P   P+GNR    R A PP    P + +PP P+ PR   S+ A PPPPP  R G  PL
Sbjct: 73  PPPPPPPVGNRPSIHREAVPPPP--PQNNKPPVPSTPRPSASSQAPPPPPPPSRPGPPPL 130

Query: 354 PTAMRVKTKGVMMPMPTGWRGSRACPGSYEAGRHDPVPADPS 229
           P +     +   +P       S + P     GR  P+P  PS
Sbjct: 131 PPSSSGNDETPRLPQ-RNLSLSSSTPPLPSPGRSGPLPPPPS 171

 Score = 38.1 bits (87), Expect = 0.13
 Identities = 35/118 (29%), Positives = 42/118 (34%), Gaps = 4/118 (3%)
 Frame = -1

Query: 531 PLPQPWRRPIGNRRRQWRSATPPARA*PPHARPPPPA--APRSATATPPPPPAPRRGKT- 361
           PLP P R              PP    PP  RPPPP    P  +   PPPPP  R G T 
Sbjct: 156 PLPSPGRS----------GPLPP----PPSERPPPPVRDPPGRSGPLPPPPPVSRNGSTS 201

Query: 360 -PLPTAMRVKTKGVMMPMPTGWRGSRACPGSYEAGRHDPVPADPSRCRTRWNPGSGTP 190
             LP   ++               SR+   S  +G   P+P D         P +G P
Sbjct: 202 RALPATPQLP--------------SRSGVDSPRSGPRPPLPPD--------RPSAGAP 237

 Score = 37.0 bits (84), Expect = 0.28
 Identities = 34/114 (29%), Positives = 41/114 (35%), Gaps = 11/114 (9%)
 Frame = -1

Query: 537 RRPLPQPWRRPI-GNRRRQWRSAT----PPARA*PPHARPPPPAAPRSATATPPPPPAPR 373
           R+P P P   P  GNR       +    P + + P   RPP P  P  A    PPPP P 
Sbjct: 20  RQPSPGPTPPPFPGNRGTALGGGSIRQSPLSSSSPFSNRPPLPPTPSRALDDKPPPPPPP 79

Query: 372 RGKTP------LPTAMRVKTKGVMMPMPTGWRGSRACPGSYEAGRHDPVPADPS 229
            G  P      +P       K  +   P     S+A P      R  P P  PS
Sbjct: 80  VGNRPSIHREAVPPPPPQNNKPPVPSTPRPSASSQAPPPPPPPSRPGPPPLPPS 133

 Score = 35.4 bits (80), Expect = 0.82
 Identities = 23/58 (39%), Positives = 31/58 (52%), Gaps = 7/58 (12%)
 Frame = +1

Query: 481 PLPPPISDRPPPRLWQRPPAAAAPSPTP---RRRDVT----PPSCRLLARSGCQRRRT 633
           PLPPP S+RPPP + + PP  + P P P    R   T    P + +L +RSG    R+
Sbjct: 165 PLPPPPSERPPPPV-RDPPGRSGPLPPPPPVSRNGSTSRALPATPQLPSRSGVDSPRS 221

 Score = 33.5 bits (75), Expect = 3.1
 Identities = 26/100 (26%), Positives = 39/100 (39%)
 Frame = -1

Query: 531 PLPQPWRRPIGNRRRQWRSATPPARA*PPHARPPPPAAPRSATATPPPPPAPRRGKTPLP 352
           P PQ  + P+ +  R   S+  P    PP    PPP  P S++     P  P+R  +   
Sbjct: 94  PPPQNNKPPVPSTPRPSASSQAPPPPPPPSRPGPPPLPP-SSSGNDETPRLPQRNLSLSS 152

Query: 351 TAMRVKTKGVMMPMPTGWRGSRACPGSYEAGRHDPVPADP 232
           +   + + G   P+P         P     GR  P+P  P
Sbjct: 153 STPPLPSPGRSGPLPPPPSERPPPPVRDPPGRSGPLPPPP 192

 Score = 32.0 bits (71), Expect = 9.0
 Identities = 15/46 (32%), Positives = 21/46 (45%), Gaps = 9/46 (19%)
 Frame = +1

Query: 478 PPLPPPISDR---------PPPRLWQRPPAAAAPSPTPRRRDVTPP 588
           PP PPP+ +R         PPP    +PP  + P P+   +   PP
Sbjct: 74  PPPPPPVGNRPSIHREAVPPPPPQNNKPPVPSTPRPSASSQAPPPP 119

>ref|NP_045322.1| very large virion protein (tegument) [Bovine herpesvirus 1]
            gi|1491621|emb|CAB01605.1| UL36 [Bovine herpesvirus 1]
            gi|2653311|emb|CAA06097.1| very large virion protein
            (tegument) [Bovine herpesvirus type 1.1 (strain Cooper)]
          Length = 3247

 Score = 48.9 bits (115), Expect(2) = 4e-07
 Identities = 47/145 (32%), Positives = 49/145 (33%), Gaps = 22/145 (15%)
 Frame = -1

Query: 672  ASAGYAACAAPAQGPPPLTAR-ASQQATAWGCHIAPSWRWGWCRRCRRPLPQPWRRPI-- 502
            A   Y    A AQG P L A  A+  A A G   A         R   P   PWRRP   
Sbjct: 2547 AHDAYPPAPAHAQGKPALLAAPAAGAAEAPGVERARRLTRRTGPRKSMPAALPWRRPPPA 2606

Query: 501  -----------GNRRRQWRSATPPARA*PPHARP--------PPPAAPRSATATPPPPPA 379
                       G R        PPA   PP A P        PPPA P    A P PPPA
Sbjct: 2607 SLVSAAPPVPPGPRLPPAPPLPPPAPPLPPPAPPLPPPAPPLPPPAPPLPPPAPPLPPPA 2666

Query: 378  PRRGKTPLPTAMRVKTKGVMMPMPT 304
            P     P P          + P PT
Sbjct: 2667 PSTAPVPAPPLPPPALTPALTPAPT 2691

 Score = 41.6 bits (96), Expect = 0.011
 Identities = 24/56 (42%), Positives = 27/56 (47%), Gaps = 2/56 (3%)
 Frame = -1

Query: 468  PPARA*PPHARPPPPAAPRSA--TATPPPPPAPRRGKTPLPTAMRVKTKGVMMPMP 307
            PPA   PP A P PP AP +A   A P PPPA     TP PT        + +P P
Sbjct: 2650 PPAPPLPPPAPPLPPPAPSTAPVPAPPLPPPALTPALTPAPTPAPTPAPPLPLPAP 2705

 Score = 38.1 bits (87), Expect = 0.13
 Identities = 33/101 (32%), Positives = 41/101 (39%), Gaps = 17/101 (16%)
 Frame = -1

Query: 480  RSATPPA--RA*PPHA--RPPPPAAPRSATATPPPPPAPRRGKTPLPTAMRVKTKGVMM- 316
            R A PPA  R  PP A  RP PP AP      P PPPAP R  T + +  ++      + 
Sbjct: 2850 RPAPPPAPERPAPPPAPERPAPPPAPER----PAPPPAPERPATAVQSGSKIPAPSNALV 2905

Query: 315  -----------PMPTGWRGSRACP-GSYEAGRHDPVPADPS 229
                       P P G  G+ A P G     R +    DP+
Sbjct: 2906 GQVAPALLRRGPSPRGKPGAPARPTGGANIARKNTRAVDPT 2946

 Score = 37.4 bits (85), Expect = 0.22
 Identities = 31/81 (38%), Positives = 34/81 (41%), Gaps = 7/81 (8%)
 Frame = -1

Query: 480  RSATPPA--RA*PPHA--RPPPPAAPRSATATPPPPPAPRRGKTPLPTAMRVKT---KGV 322
            R A PPA  R  PP A  RP PP AP      P PPPAP R   P P   R  T    G 
Sbjct: 2841 RPAPPPAPERPAPPPAPERPAPPPAPER----PAPPPAPER-PAPPPAPERPATAVQSGS 2895

Query: 321  MMPMPTGWRGSRACPGSYEAG 259
             +P P+     +  P     G
Sbjct: 2896 KIPAPSNALVGQVAPALLRRG 2916

 Score = 37.4 bits (85), Expect = 0.22
 Identities = 50/174 (28%), Positives = 61/174 (34%), Gaps = 22/174 (12%)
 Frame = +1

Query: 133  PPLPTAAPAALAWAPPPAPWCPGSRIPSCTTARWISWNRIVPTCFIGSRACATSSPACRH 312
            PP P +APA     P PA   P S  P+         +  +   +  + A     PA  H
Sbjct: 2495 PPTPASAPA-----PAPA-LAPASAEPALAWGADEWLDDEIGDAYPPAPAHDAYPPAPAH 2548

Query: 313  RHHHPLRLHPHRRRQRRLAAP-----------RSRRRRRRRCCR----ARCCWRRWTRVW 447
              + P   H  + +   LAAP           R+RR  RR   R    A   WRR     
Sbjct: 2549 DAYPPAPAHA-QGKPALLAAPAAGAAEAPGVERARRLTRRTGPRKSMPAALPWRRPPPAS 2607

Query: 448  RSCAS-------WRSCRPPLPPPISDRPPPRLWQRPPAAAAPSPTPRRRDVTPP 588
               A+            PPLPPP    PPP     PPA   P P P      PP
Sbjct: 2608 LVSAAPPVPPGPRLPPAPPLPPPAPPLPPPAPPLPPPAPPLPPPAPPLPPPAPP 2661

 Score = 36.6 bits (83), Expect = 0.37
 Identities = 17/37 (45%), Positives = 17/37 (45%)
 Frame = +1

Query: 478  PPLPPPISDRPPPRLWQRPPAAAAPSPTPRRRDVTPP 588
            PPLPPP    PPP     PPA   P P P    V  P
Sbjct: 2639 PPLPPPAPPLPPPAPPLPPPAPPLPPPAPSTAPVPAP 2675

 Score = 36.2 bits (82), Expect = 0.48
 Identities = 38/109 (34%), Positives = 43/109 (38%), Gaps = 4/109 (3%)
 Frame = -1

Query: 474  ATPPA--RA*PPHA--RPPPPAAPRSATATPPPPPAPRRGKTPLPTAMRVKTKGVMMPMP 307
            A PPA  R  PP A  RP PP AP      P PPPAP R   P P   R        P P
Sbjct: 2834 APPPAPERPAPPPAPERPAPPPAPER----PAPPPAPER-PAPPPAPER------PAPPP 2882

Query: 306  TGWRGSRACPGSYEAGRHDPVPADPSRCRTRWNPGSGTPGCRRRGPGQR 160
               R + A     ++G   P P++          G   P   RRGP  R
Sbjct: 2883 APERPATA----VQSGSKIPAPSNAL-------VGQVAPALLRRGPSPR 2920

 Score = 33.1 bits (74), Expect = 4.1
 Identities = 34/103 (33%), Positives = 48/103 (46%)
 Frame = +3

Query: 228  EMDQLEQDRAYLLHRIQGMRDFLASLSASASSPPSSSPASPSAAASCRAAEQAAAAASLL 407
            E+D +  D A     I G     ASL AS +   + S A+  AAA   AA +A  A +  
Sbjct: 842  ELDAVLSDVA----AINGRSASRASLEASMARFEAMSAAAARAAAG--AAAEAPGAGAEE 895

Query: 408  QSEVLLAAVDARVAVMRELEELQTSTASSYFRSAAAKAVATAA 536
             ++   AAV     V+R+L+ L T  A+   R A A+  A  A
Sbjct: 896  AADAAEAAVRGADDVLRQLDALATGAAAD--REARARVAAARA 936

 Score = 32.3 bits (72), Expect = 6.9
 Identities = 15/36 (41%), Positives = 17/36 (46%)
 Frame = +1

Query: 481  PLPPPISDRPPPRLWQRPPAAAAPSPTPRRRDVTPP 588
            P PPP  +RP P     PPA   P+P P      PP
Sbjct: 2851 PAPPPAPERPAP-----PPAPERPAPPPAPERPAPP 2881

 Score = 32.3 bits (72), Expect = 6.9
 Identities = 15/36 (41%), Positives = 17/36 (46%)
 Frame = +1

Query: 481  PLPPPISDRPPPRLWQRPPAAAAPSPTPRRRDVTPP 588
            P PPP  +RP P     PPA   P+P P      PP
Sbjct: 2842 PAPPPAPERPAP-----PPAPERPAPPPAPERPAPP 2872

 Score = 32.3 bits (72), Expect = 6.9
 Identities = 15/36 (41%), Positives = 17/36 (46%)
 Frame = +1

Query: 481  PLPPPISDRPPPRLWQRPPAAAAPSPTPRRRDVTPP 588
            P PPP  +RP P     PPA   P+P P      PP
Sbjct: 2833 PAPPPAPERPAP-----PPAPERPAPPPAPERPAPP 2863

 Score = 32.0 bits (71), Expect = 9.0
 Identities = 23/75 (30%), Positives = 24/75 (31%)
 Frame = -1

Query: 531  PLPQPWRRPIGNRRRQWRSATPPARA*PPHARPPPPAAPRSATATPPPPPAPRRGKTPLP 352
            PLP P   P          A  PA    P   PP P         P P PAP     P P
Sbjct: 2676 PLPPPALTP----------ALTPAPTPAPTPAPPLPLPAPITVLVPAPVPAPAPIPAPAP 2725

Query: 351  TAMRVKTKGVMMPMP 307
            T     T    +P P
Sbjct: 2726 TPAPAPTPAPPLPPP 2740

 Score = 27.3 bits (59), Expect(2) = 5.2
 Identities = 25/81 (30%), Positives = 27/81 (32%), Gaps = 3/81 (3%)
 Frame = -1

Query: 474  ATPPARA*PPHARPPPPAAPRSATATPPPPPAPRRG---KTPLPTAMRVKTKGVMMPMPT 304
            A  PA A  P   P P  AP  A   PPP P    G    T  PT      K +    P 
Sbjct: 2712 APVPAPAPIPAPAPTPAPAPTPAPPLPPPAPDGAMGALSATRRPTRRAGARKSLPAAQPR 2771

Query: 303  GWRGSRACPGSYEAGRHDPVP 241
                    P S  A   + VP
Sbjct: 2772 QRLLRSRSPASVPAPGSELVP 2792

 Score = 26.9 bits (58), Expect(2) = 4e-07
 Identities = 22/66 (33%), Positives = 28/66 (42%), Gaps = 6/66 (9%)
 Frame = -3

Query: 181  AAGPRPAPPVPPLAVAEPHG------DATQRGEQLGVIPAELRELRPISLRSPRASPPCA 20
            A  P PAPP+PP A     G        T+R      +PA     R +  RSP + P   
Sbjct: 2728 APAPTPAPPLPPPAPDGAMGALSATRRPTRRAGARKSLPAAQPRQRLLRSRSPASVP--- 2784

Query: 19   AAPDAE 2
             AP +E
Sbjct: 2785 -APGSE 2789

 Score = 23.9 bits (50), Expect(2) = 5.2
 Identities = 21/61 (34%), Positives = 24/61 (38%)
 Frame = -3

Query: 193  TRVQAAGPRPAPPVPPLAVAEPHGDATQRGEQLGVIPAELRELRPISLRSPRASPPCAAA 14
            +RVQA    PAPP  P   A P        E+    PA  R   P +   P A PP    
Sbjct: 2824 SRVQAPVDAPAPPPAPERPAPPPAP-----ERPAPPPAPERPAPPPAPERP-APPPAPER 2877

Query: 13   P 11
            P
Sbjct: 2878 P 2878

>ref|NP_767161.1| blr0521 [Bradyrhizobium japonicum] gi|27348769|dbj|BAC45786.1|
           blr0521 [Bradyrhizobium japonicum USDA 110]
          Length = 745

 Score = 55.5 bits (132), Expect = 8e-07
 Identities = 44/131 (33%), Positives = 50/131 (37%), Gaps = 6/131 (4%)
 Frame = -1

Query: 477 SATPPARA*P-PHARPPPPAAPRSATATPPPPPAPRRGKTPLPTAMRVKTKGVMMPMPTG 301
           +A PPA A P P A PPPP  P +  A PPPPP P   K P P       +    P P  
Sbjct: 81  AAPPPAAAPPRPAAPPPPPPPPAARPAPPPPPPPPAAPKQPSPPPAAAPQQHAPTPPPPA 140

Query: 300 WRGSR-----ACPGSYEAGRHDPVPADPSRCRTRWNPGSGTPGCRRRGPGQRRRCRRWQW 136
              +R       P    A +H P P  P   R    P    P     GP  R        
Sbjct: 141 PPAARPAPTPPAPPPAAAPQHAPPPPPPPAARPTPTPPPPPPA----GPAAR------PT 190

Query: 135 RSHTATPRSVA 103
            + TATP  VA
Sbjct: 191 PAPTATPTPVA 201

 Score = 55.5 bits (132), Expect = 8e-07
 Identities = 52/163 (31%), Positives = 56/163 (33%), Gaps = 2/163 (1%)
 Frame = -1

Query: 648 AAPAQGPPPLTARASQQATAWGCHIAPSWRWGWCRRCRRPLPQPWRRPIGNRRRQWRSAT 469
           AAP Q  PP  A   Q A        P+          RP P P              A 
Sbjct: 116 AAPKQPSPPPAAAPQQHAPTPPPPAPPA---------ARPAPTP-------------PAP 153

Query: 468 PPARA*PPHARPPPPAAPRSATATPPPPPAPRRGKTPLPTAMRVKTKGVMMPMPTGWRGS 289
           PPA A P HA PPPP  P +A  TP PPP P  G    PT     T   + P P      
Sbjct: 154 PPAAA-PQHAPPPPP--PPAARPTPTPPPPPPAGPAARPTPAPTATPTPVAPPPAAPTAR 210

Query: 288 RACPGSYEAGRHDPVPADPSRCRTRWNPGSG-TPGCRRRG-PG 166
              P         P PA  +       P  G TPG    G PG
Sbjct: 211 PGSPAPAATPAPTPTPAPTATPAPTATPAPGSTPGAPPAGRPG 253

 Score = 50.4 bits (119), Expect(2) = 5e-07
 Identities = 34/99 (34%), Positives = 38/99 (38%), Gaps = 2/99 (2%)
 Frame = -1

Query: 480 RSATPPARA*PPH--ARPPPPAAPRSATATPPPPPAPRRGKTPLPTAMRVKTKGVMMPMP 307
           R A PP  A PPH  A PPP AAP    A PPPPP P     P P            P P
Sbjct: 66  RPAAPPPAAAPPHPPAAPPPAAAPPRPAAPPPPPPPPAARPAPPPP-----------PPP 114

Query: 306 TGWRGSRACPGSYEAGRHDPVPADPSRCRTRWNPGSGTP 190
                  + P +    +H P P  P+    R  P    P
Sbjct: 115 PAAPKQPSPPPAAAPQQHAPTPPPPAPPAARPAPTPPAP 153

 Score = 37.7 bits (86), Expect = 0.16
 Identities = 51/189 (26%), Positives = 58/189 (29%), Gaps = 4/189 (2%)
 Frame = +1

Query: 61  AAALATQPESPLAARHAAWRRRVAPPLPTAAPAALAWAPPPAPWCPGSRIPSCTTARWIS 240
           AAA    P +P  A  AA  R  APP P   PAA    PPP P     + PS        
Sbjct: 73  AAAPPHPPAAPPPA--AAPPRPAAPPPPPPPPAARPAPPPPPPPPAAPKQPS-------- 122

Query: 241 WNRIVPTCFIGSRACATSSPACRHRHHHPLRLHPHRRRQRRLAAPRSRRRRRRRCCRARC 420
                              PA   + H P    P     R    P +             
Sbjct: 123 -----------------PPPAAAPQQHAPTPPPPAPPAARPAPTPPAPPP---------- 155

Query: 421 CWRRWTRVWRSCASWRSCRPPLPPPISDRPPPRLWQRPPAAAA----PSPTPRRRDVTPP 588
                       A+     PP PPP + RP P     PPA  A    P+PT     V PP
Sbjct: 156 ------------AAAPQHAPPPPPPPAARPTPTPPPPPPAGPAARPTPAPTATPTPVAPP 203

Query: 589 SCRLLARSG 615
                AR G
Sbjct: 204 PAAPTARPG 212

 Score = 37.4 bits (85), Expect = 0.22
 Identities = 47/176 (26%), Positives = 50/176 (27%), Gaps = 6/176 (3%)
 Frame = -1

Query: 675 AASAGYAACAAPAQGPPPLTARASQQATAWGCHIAPSWRWGWCRRCRRPLPQPWRRPIGN 496
           AA        APA  P P    A     A     AP    G     R   P P  RP   
Sbjct: 205 AAPTARPGSPAPAATPAPTPTPAPTATPAPTATPAPGSTPGAPPAGRPGAPPPGVRP--- 261

Query: 495 RRRQWRSATPPARA*P--PHARPPPPAAPRSATATPPPPPAPRRGKTPLPTAMRVKTKGV 322
                   +PPA   P  P A P P   P       PP   P    TP P        G 
Sbjct: 262 -------GSPPAAGSPPAPGATPAPTTTPAPGGTATPPSGRPGPASTPAP--------GA 306

Query: 321 MMPMPTGWRGSRAC----PGSYEAGRHDPVPADPSRCRTRWNPGSGTPGCRRRGPG 166
             P PT            PG   AG   P P           P +GTP    +  G
Sbjct: 307 ATPAPTATPAPGGALTPPPGRPGAG---PTPGPQGGTPPAGAPAAGTPAAPPQAGG 359

 Score = 37.0 bits (84), Expect = 0.28
 Identities = 40/128 (31%), Positives = 49/128 (38%), Gaps = 7/128 (5%)
 Frame = -1

Query: 477 SATPPARA*PPHARPPPPAAPRSATATP-------PPPPAPRRGKTPLPTAMRVKTKGVM 319
           +ATPP+    P + P P AA  + TATP       PPP  P  G TP P       +G  
Sbjct: 288 TATPPSGRPGPASTPAPGAATPAPTATPAPGGALTPPPGRPGAGPTPGP-------QGGT 340

Query: 318 MPMPTGWRGSRACPGSYEAGRHDPVPADPSRCRTRWNPGSGTPGCRRRGPGQRRRCRRWQ 139
            P      G+ A P   +AG     PA P+         S  PG     P   R     Q
Sbjct: 341 PPAGAPAAGTPAAPP--QAGGLPARPAAPAGAAA----PSTVPGSAAATPPPNRA----Q 390

Query: 138 WRSHTATP 115
           +   T TP
Sbjct: 391 FAPPTVTP 398

 Score = 36.2 bits (82), Expect = 0.48
 Identities = 20/44 (45%), Positives = 23/44 (51%), Gaps = 3/44 (6%)
 Frame = -1

Query: 477 SATPP---ARA*PPHARPPPPAAPRSATATPPPPPAPRRGKTPL 355
           +ATPP   A+  PP   P   AAP      PPPP  P+R  TPL
Sbjct: 381 AATPPPNRAQFAPPTVTPAFQAAPTVVAPLPPPPRPPQRDLTPL 424

 Score = 33.9 bits (76), Expect = 2.4
 Identities = 38/119 (31%), Positives = 42/119 (34%), Gaps = 7/119 (5%)
 Frame = -1

Query: 642 PAQGPPPLTARASQQATA--WGCHIAPSWRWGWCRRCRRPLPQPWRRPIGNRRRQWRSAT 469
           PA  P P  A  +  AT    G    P  R G       P PQ    P G       +A 
Sbjct: 298 PASTPAPGAATPAPTATPAPGGALTPPPGRPG---AGPTPGPQGGTPPAGAPAAGTPAAP 354

Query: 468 P-----PARA*PPHARPPPPAAPRSATATPPPPPAPRRGKTPLPTAMRVKTKGVMMPMP 307
           P     PAR   P     P   P SA ATPPP  A     T  P      T  V+ P+P
Sbjct: 355 PQAGGLPARPAAPAGAAAPSTVPGSAAATPPPNRAQFAPPTVTPAFQAAPT--VVAPLP 411

 Score = 27.3 bits (59), Expect(3) = 0.21
 Identities = 24/78 (30%), Positives = 29/78 (36%), Gaps = 3/78 (3%)
 Frame = +2

Query: 248 GSCLPAS*DPGHARLPRQPVGIGIITPFVFTRIAVGSGVLPRRGAGGGGGVAVAERGAAG 427
           G+  P S  PG A  P      G  TP      A G  + P  G  G G     + G   
Sbjct: 287 GTATPPSGRPGPASTPAP----GAATPAPTATPAPGGALTPPPGRPGAGPTPGPQGGTPP 342

Query: 428 GGGRACGGHA---RAGGV 472
            G  A G  A   +AGG+
Sbjct: 343 AGAPAAGTPAAPPQAGGL 360

 Score = 25.4 bits (54), Expect(2) = 5e-07
 Identities = 18/65 (27%), Positives = 22/65 (33%)
 Frame = -3

Query: 199 RDTRVQAAGPRPAPPVPPLAVAEPHGDATQRGEQLGVIPAELRELRPISLRSPRASPPCA 20
           R T    A P P  P P    A P   A          PA      P +  +P A+P   
Sbjct: 188 RPTPAPTATPTPVAPPPAAPTARPGSPAP------AATPAPTPTPAPTATPAPTATPAPG 241

Query: 19  AAPDA 5
           + P A
Sbjct: 242 STPGA 246

 Score = 23.9 bits (50), Expect(3) = 0.21
 Identities = 19/53 (35%), Positives = 22/53 (40%), Gaps = 3/53 (5%)
 Frame = +1

Query: 64  AALATQPESPLAARHAAWRRRVAP---PLPTAAPAALAWAPPPAPWCPGSRIP 213
           AA   +P SP  A   A     AP   P PTA PA  +    P    PG+  P
Sbjct: 205 AAPTARPGSPAPAATPAPTPTPAPTATPAPTATPAPGSTPGAPPAGRPGAPPP 257

 Score = 23.5 bits (49), Expect(3) = 0.21
 Identities = 14/39 (35%), Positives = 19/39 (47%), Gaps = 6/39 (15%)
 Frame = +1

Query: 487 PPPISDRPPPRL---WQRPPAAAAP---SPTPRRRDVTP 585
           PP  +   PP +   +Q  P   AP    P P +RD+TP
Sbjct: 385 PPNRAQFAPPTVTPAFQAAPTVVAPLPPPPRPPQRDLTP 423

>ref|XP_311109.1| ENSANGP00000017356 [Anopheles gambiae] gi|21293986|gb|EAA06131.1|
           ENSANGP00000017356 [Anopheles gambiae str. PEST]
          Length = 683

 Score = 45.1 bits (105), Expect(3) = 2e-06
 Identities = 31/89 (34%), Positives = 35/89 (38%), Gaps = 2/89 (2%)
 Frame = -1

Query: 501 GNRRRQWRSATPPARA*P--PHARPPPPAAPRSATATPPPPPAPRRGKTPLPTAMRVKTK 328
           G+  +QW    P   A P  P+  PPPP  P S     PPPPA      P P+       
Sbjct: 562 GSSHQQWPPMMPMPPAPPTLPNPPPPPPTVP-SLMQWTPPPPAAADTMVPAPSHHHTYGA 620

Query: 327 GVMMPMPTGWRGSRACPGSYEAGRHDPVP 241
           GV  P   GW G  A  G   A    P P
Sbjct: 621 GVAPPTMGGW-GKGAAGGGLIASGWPPAP 648

 Score = 30.8 bits (68), Expect(2) = 0.017
 Identities = 14/30 (46%), Positives = 18/30 (59%)
 Frame = +2

Query: 377 GAGGGGGVAVAERGAAGGGGRACGGHARAG 466
           G GGGGG + +  G +GGGG   G  + AG
Sbjct: 533 GGGGGGGGSSSGGGGSGGGGSQSGTGSGAG 562

 Score = 29.3 bits (64), Expect(2) = 0.017
 Identities = 14/36 (38%), Positives = 17/36 (46%), Gaps = 7/36 (19%)
 Frame = +1

Query: 478 PPLPPPISDRPPP-------RLWQRPPAAAAPSPTP 564
           PP PP + + PPP         W  PP AAA +  P
Sbjct: 575 PPAPPTLPNPPPPPPTVPSLMQWTPPPPAAADTMVP 610

 Score = 25.0 bits (53), Expect(3) = 2e-06
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = -2

Query: 563 GVGDGAAAAGGRCHSLGGGRSEIGGGSG 480
           G G G+++ GG     GGG S+ G GSG
Sbjct: 536 GGGGGSSSGGG---GSGGGGSQSGTGSG 560

 Score = 22.7 bits (47), Expect(3) = 2e-06
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -3

Query: 172 PRPAPPVPPLAVAEPH 125
           P PAPP PP++    H
Sbjct: 657 PGPAPPPPPMSGMPSH 672



EST assemble image


clone accession position
1 HCL039g03_r AV641750 1 463
2 LCL087h11_r AV631038 211 687




Chlamydomonas reinhardtii
Kazusa DNA Research Institute