Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC002454A_C01 KCC002454A_c01
(505 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|O85709|RELA_STRAT GTP pyrophosphokinase (ATP:GTP 3'-pyrophosp... 38 0.081
ref|NP_627587.1| hypothetical protein [Streptomyces coelicolor A... 37 0.11
ref|ZP_00007154.1| COG0449: Glucosamine 6-phosphate synthetase, ... 37 0.11
ref|XP_212138.1| hypothetical protein XP_212138 [Homo sapiens] 37 0.14
ref|NP_897872.1| conserved hypothetical protein [Synechococcus s... 37 0.18
>sp|O85709|RELA_STRAT GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase) (ppGpp
synthetase I) ((P)ppGpp synthetase)
gi|3309186|gb|AAC26021.1| RelA protein [Streptomyces
antibioticus]
Length = 841
Score = 37.7 bits (86), Expect = 0.081
Identities = 30/75 (40%), Positives = 33/75 (44%), Gaps = 1/75 (1%)
Frame = +1
Query: 283 AAAPATARGPTSSSRAE*AGGGW*QLGRAAPEHDRKRPARWPP-RPAPKPAGPQRPAVSL 459
AA P +A G + A GG EHDR PA P R PKPA P+RP
Sbjct: 10 AAKPDSAAGAAAEPAAHAQDGG------GPVEHDRSAPADKPAERTRPKPAPPERPRPPP 63
Query: 460 QRFRPA*DGWQPAGR 504
R R A QPA R
Sbjct: 64 PRARAA---GQPAAR 75
>ref|NP_627587.1| hypothetical protein [Streptomyces coelicolor A3(2)]
gi|7479967|pir||T36390 hypothetical protein SCE94.30c -
Streptomyces coelicolor gi|4585611|emb|CAB40879.1|
hypothetical protein [Streptomyces coelicolor A3(2)]
Length = 208
Score = 37.4 bits (85), Expect = 0.11
Identities = 26/75 (34%), Positives = 36/75 (47%), Gaps = 1/75 (1%)
Frame = +1
Query: 226 RALHGASSGPCRCARSTAYAAAPATARGPTSSSRAE*-AGGGW*QLGRAAPEHDRKRPAR 402
R A++ RCA T A +T P + +R A G Q G+ P+ +P+
Sbjct: 107 RGTPAAAALLARCAPETPTAPTASTVPLPAARARTRLHAVPGGRQSGKEPPQKPAAKPS- 165
Query: 403 WPPRPAPKPAGPQRP 447
PRPAP PA P+RP
Sbjct: 166 --PRPAPAPATPKRP 178
>ref|ZP_00007154.1| COG0449: Glucosamine 6-phosphate synthetase, contains
amidotransferase and phosphosugar isomerase domains
[Rhodobacter sphaeroides]
Length = 606
Score = 37.4 bits (85), Expect = 0.11
Identities = 36/101 (35%), Positives = 40/101 (38%), Gaps = 2/101 (1%)
Frame = -3
Query: 500 PAGCHPSHA-GRKRCRLTAGRCGPAGLGAGRGGH-LAGRLRSCSGAARPSCHQPPPAHSA 327
PAG P A G +RCR A GP G GGH L RL C G A + A
Sbjct: 45 PAGAQPPAAQGGERCRTDAAGHGPGGPDRAGGGHGLHRRLPRCRG-AHDLGRRLGLADRR 103
Query: 326 RLLLVGPRAVAGAAA*AVLRAQRQGPELAP*SARCTAGASR 204
R GPRA G R +R A C AG +R
Sbjct: 104 RRQRRGPRARGGPRGGRGARCRRHDGGSADPPDVCVAGPAR 144
>ref|XP_212138.1| hypothetical protein XP_212138 [Homo sapiens]
Length = 113
Score = 37.0 bits (84), Expect = 0.14
Identities = 23/66 (34%), Positives = 29/66 (43%), Gaps = 2/66 (3%)
Frame = -1
Query: 421 APGGAATSPAACGRAQGRHVPVVTSRRQLILHGCCWSD--HEPLQGRLRRPCCERSGRAP 248
AP A+ A GR + RR +GCCW H P R R C R+GR P
Sbjct: 47 APKPLASPEAGMAGPGGRRTTSLPKRRG---YGCCWRGEAHSPRTARTGRTRCGRAGRRP 103
Query: 247 SSRREA 230
+ R+ A
Sbjct: 104 APRQVA 109
>ref|NP_897872.1| conserved hypothetical protein [Synechococcus sp. WH 8102]
gi|33639288|emb|CAE08296.1| conserved hypothetical
protein [Synechococcus sp. WH 8102]
Length = 352
Score = 36.6 bits (83), Expect = 0.18
Identities = 16/29 (55%), Positives = 17/29 (58%)
Frame = +1
Query: 361 GRAAPEHDRKRPARWPPRPAPKPAGPQRP 447
G AAP R+R R PP P P P GP RP
Sbjct: 113 GDAAPVSSRRRRTRKPPPPPPPPTGPTRP 141
