Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC002445A_C01 KCC002445A_c01
(496 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|ZP_00056820.1| COG2115: Xylose isomerase [Thermobifida fusca] 42 0.004
dbj|BAC82910.1| unknown protein [Oryza sativa (japonica cultivar... 40 0.012
ref|NP_823727.1| putative translation initiation factor IF-2 [St... 40 0.012
ref|ZP_00102791.1| COG3736: Type IV secretory pathway, component... 39 0.035
ref|XP_315986.1| ENSANGP00000010844 [Anopheles gambiae] gi|21299... 39 0.035
>ref|ZP_00056820.1| COG2115: Xylose isomerase [Thermobifida fusca]
Length = 754
Score = 42.0 bits (97), Expect = 0.004
Identities = 30/81 (37%), Positives = 37/81 (45%), Gaps = 3/81 (3%)
Frame = -2
Query: 486 RPPPARTTAPQFPSTARSCSPPTITAAGRRDVCGGRPCAPATCAQRL*PRQSPQP*PSLR 307
+PP TA P+ A + PPT T G C+P+ A PR+SP P S
Sbjct: 53 KPPNPSPTAATPPAPATTTPPPTPT---------GPTCSPSPSAANSAPRESPPPPKSSA 103
Query: 306 AS---SSRPSPSVACIPAPAW 253
AS +S PS S A PA W
Sbjct: 104 ASPPPNSPPSTSSAPAPATTW 124
>dbj|BAC82910.1| unknown protein [Oryza sativa (japonica cultivar-group)]
Length = 943
Score = 40.4 bits (93), Expect = 0.012
Identities = 33/117 (28%), Positives = 49/117 (41%), Gaps = 6/117 (5%)
Frame = -2
Query: 483 PPPARTTAPQFP--STARSCSPPTITAAGRRDVCGGRPCAPATCAQRL*PRQSPQP*PSL 310
PPP + P P S+A + SPP T A D GG P + + ++ P P PSL
Sbjct: 15 PPPRSASPPATPVASSAGASSPPAQTNAASIDWLGGEPISKVESSSQIAPH---APRPSL 71
Query: 309 RASSSRPSPSVACIPAPAWSAGAARAR----RASQWLAKPGAQSG*PA*GSSCPARG 151
+++ + + W G R ++S W +KP A S +C RG
Sbjct: 72 STNAAGAAVDFSQPSCRPWERGDLLRRLATFKSSTWASKPKAAS-----SLACARRG 123
>ref|NP_823727.1| putative translation initiation factor IF-2 [Streptomyces
avermitilis MA-4680] gi|29606199|dbj|BAC70262.1|
putative translation initiation factor IF-2
[Streptomyces avermitilis MA-4680]
Length = 1046
Score = 40.4 bits (93), Expect = 0.012
Identities = 39/111 (35%), Positives = 50/111 (44%), Gaps = 4/111 (3%)
Frame = -2
Query: 477 PARTTAPQFPSTARSCSPPTIT---AAGRRDVCGGRPCA-PATCAQRL*PRQSPQP*PSL 310
PA+ AP AR +P AA R RP A PA R P+ +P+P P
Sbjct: 65 PAKPGAPSPAQAARPAAPRPPAPKPAAAERPAAAERPAAAPAAPGPRPGPKPAPRPAP-- 122
Query: 309 RASSSRPSPSVACIPAPAWSAGAARARRASQWLAKPGAQSG*PA*GSSCPA 157
+ P+P+ AP SA AA A AS +PGA+ G P G + PA
Sbjct: 123 ----AAPAPAAPEFTAPP-SAPAAPAAAASG--PRPGARPGAPKPGGARPA 166
>ref|ZP_00102791.1| COG3736: Type IV secretory pathway, component VirB8
[Desulfitobacterium hafniense]
Length = 283
Score = 38.9 bits (89), Expect = 0.035
Identities = 29/87 (33%), Positives = 36/87 (41%)
Frame = -2
Query: 483 PPPARTTAPQFPSTARSCSPPTITAAGRRDVCGGRPCAPATCAQRL*PRQSPQP*PSLRA 304
PPPA P+ A + +PP A D G+P A A PQP +
Sbjct: 187 PPPADYPVGSAPAAAPAAAPPAQQAI---DPATGQPIPAAAPAAYPPGTVPPQPGVAPAQ 243
Query: 303 SSSRPSPSVACIPAPAWSAGAARARRA 223
+ P P VA P PA+ AGA A A
Sbjct: 244 PGAAPQPGVAPAPNPAYPAGAPAAAPA 270
>ref|XP_315986.1| ENSANGP00000010844 [Anopheles gambiae] gi|21299547|gb|EAA11692.1|
ENSANGP00000010844 [Anopheles gambiae str. PEST]
Length = 352
Score = 38.9 bits (89), Expect = 0.035
Identities = 25/78 (32%), Positives = 32/78 (40%)
Frame = -2
Query: 486 RPPPARTTAPQFPSTARSCSPPTITAAGRRDVCGGRPCAPATCAQRL*PRQSPQP*PSLR 307
RPPP TT P+ P T PP T + RP P T + P + +P P
Sbjct: 216 RPPPT-TTRPKPPPTTTRPKPPPTTTRPKPPPTTTRPKPPPTTTRPKPPPTTTRPRPPPT 274
Query: 306 ASSSRPSPSVACIPAPAW 253
+ RP P P PA+
Sbjct: 275 TTRPRPPPPPPPTPTPAY 292
Score = 33.9 bits (76), Expect = 1.1
Identities = 20/67 (29%), Positives = 27/67 (39%)
Frame = -2
Query: 480 PPARTTAPQFPSTARSCSPPTITAAGRRDVCGGRPCAPATCAQRL*PRQSPQP*PSLRAS 301
PP TT P+ P T PP T + RP P T + P + +P P +
Sbjct: 208 PPPTTTRPRPPPTTTRPKPPPTTTRPKPPPTTTRPKPPPTTTRPKPPPTTTRPKPPPTTT 267
Query: 300 SSRPSPS 280
RP P+
Sbjct: 268 RPRPPPT 274
